Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
9D6C
DownloadVisualize
BU of 9d6c by Molmil
Gag CA-SP1 immature lattice bound with Lenacapavir and Bevirimat from enveloped virus like particles
分子名称: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag, INOSITOL HEXAKISPHOSPHATE, ...
著者Wu, C, Meuser, M.E, Xiong, Y.
登録日2024-08-14
公開日2024-10-30
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
9DWD
DownloadVisualize
BU of 9dwd by Molmil
Gag CA-SP1 immature lattice bound with Lenacapavir from enveloped virus like particles (T8I)
分子名称: Gag, INOSITOL HEXAKISPHOSPHATE, Lenacapavir
著者Wu, C, Meuser, M.E, Xiong, Y.
登録日2024-10-09
公開日2024-10-30
最終更新日2024-12-25
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structural insights into inhibitor mechanisms on immature HIV-1 Gag lattice revealed by high-resolution in situ single-particle cryo-EM.
Biorxiv, 2024
6Q8Z
DownloadVisualize
BU of 6q8z by Molmil
Structure of human galactokinase 1 bound with N-(Cyclobutylmethyl)-1,5-dimethyl-1H-pyrazole-4-carboxamide
分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, Galactokinase, beta-D-galactopyranose, ...
著者Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W.
登録日2018-12-16
公開日2019-01-23
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of human galactokinase 1 bound with N-(Cyclobutylmethyl)-1,5-dimethyl-1H-pyrazole-4-carboxamide
To Be Published
6Q91
DownloadVisualize
BU of 6q91 by Molmil
Structure of human galactokinase 1 bound with 5-Chloro-N-isobutyl-2-methoxybenzamide
分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, 5-chloranyl-2-methoxy-~{N}-(2-methylpropyl)benzamide, Galactokinase, ...
著者Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W.
登録日2018-12-17
公開日2019-01-23
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of human galactokinase 1 bound with 5-Chloro-N-isobutyl-2-methoxybenzamide
To Be Published
7AT7
DownloadVisualize
BU of 7at7 by Molmil
Transmembrane helix of tumor necrosis factor alpha in trifluorethanol, S34P mutant
分子名称: Tumor necrosis factor
著者Guschtschin-Schmidt, N, Muhle-Goll, C.
登録日2020-10-29
公開日2020-12-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Non-canonical Shedding of TNF alpha by SPPL2a Is Determined by the Conformational Flexibility of Its Transmembrane Helix.
Iscience, 23, 2020
5KZQ
DownloadVisualize
BU of 5kzq by Molmil
Metabotropic Glutamate Receptor in complex with antagonist (1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-azanyl-3-[[3,4-bis(fluoranyl)phenyl]sulfanylmethyl]-4-oxidanyl-bicyclo[3.1.0]hexane-2,6-dicarboxylic acid
分子名称: (1~{S},2~{R},3~{S},4~{S},5~{R},6~{R})-2-azanyl-3-[[3,4-bis(fluoranyl)phenyl]sulfanylmethyl]-4-oxidanyl-bicyclo[3.1.0]hexane-2,6-dicarboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Metabotropic glutamate receptor 2
著者Chappell, M.D, Li, R, Smith, S.C, Dressman, B.A, Tromiczak, E.G, Tripp, A.E, Blanco, M.-J, Vetman, T, Quimby, S.J, Matt, J, Britton, T, Fivush, A.M, Schkeryantz, J.M, Mayhugh, D, Erickson, J.A, Bures, M, Jaramillo, C, Carpintero, M, de Diego, J.E, Barberis, M, Garcia-Cerrada, S, Soriano, J.F, Antonysamy, S, Atwell, S, MacEwan, I, Condon, B, Bradley, C, Wang, J, Zhang, A, Conners, K, Groshong, C, Wasserman, S.R, Koss, J.W, Witkin, J.M, Li, X, Overshiner, C, Wafford, K.A, Seidel, W, Wang, X.-S, Heinz, B.A, Swanson, S, Catlow, J, Bedwell, D, Monn, J.A, Mitch, C.H, Ornstein, P.
登録日2016-07-25
公開日2016-12-28
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of (1S,2R,3S,4S,5R,6R)-2-Amino-3-[(3,4-difluorophenyl)sulfanylmethyl]-4-hydroxy-bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid Hydrochloride (LY3020371HCl): A Potent, Metabotropic Glutamate 2/3 Receptor Antagonist with Antidepressant-Like Activity.
J. Med. Chem., 59, 2016
7ATB
DownloadVisualize
BU of 7atb by Molmil
Transmembrane helix of tumor necrosis factor alpha in trifluorethanol, AGALLL mutant
分子名称: Tumor necrosis factor
著者Guschtschin-Schmidt, N, Muhle-Goll, C.
登録日2020-10-29
公開日2020-12-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Non-canonical Shedding of TNF alpha by SPPL2a Is Determined by the Conformational Flexibility of Its Transmembrane Helix.
Iscience, 23, 2020
7ASY
DownloadVisualize
BU of 7asy by Molmil
Transmembrane helix of tumor necrosis factor alpha in trifluorethanol
分子名称: Tumor necrosis factor
著者Guschtschin-Schmidt, N, Muhle-Goll, C.
登録日2020-10-28
公開日2020-12-09
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Non-canonical Shedding of TNF alpha by SPPL2a Is Determined by the Conformational Flexibility of Its Transmembrane Helix.
Iscience, 23, 2020
1AE8
DownloadVisualize
BU of 1ae8 by Molmil
HUMAN ALPHA-THROMBIN INHIBITION BY EOC-D-PHE-PRO-AZALYS-ONP
分子名称: 1-ETHOXYCARBONYL-D-PHE-PRO-2(4-AMINOBUTYL)HYDRAZINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ALPHA-THROMBIN (LARGE SUBUNIT), ...
著者De Simone, G, Balliano, G, Milla, P, Gallina, C, Giordano, C, Tarricone, C, Rizzi, M, Bolognesi, M, Ascenzi, P.
登録日1997-03-06
公開日1997-12-03
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Human alpha-thrombin inhibition by the highly selective compounds N-ethoxycarbonyl-D-Phe-Pro-alpha-azaLys p-nitrophenyl ester and N-carbobenzoxy-Pro-alpha-azaLys p-nitrophenyl ester: a kinetic, thermodynamic and X-ray crystallographic study.
J.Mol.Biol., 269, 1997
6Q3W
DownloadVisualize
BU of 6q3w by Molmil
Structure of human galactokinase 1 bound with Ethyl 1-(2-pyrazinyl)-4-piperidinecarboxylate
分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, Galactokinase, beta-D-galactopyranose, ...
著者Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W.
登録日2018-12-04
公開日2019-01-23
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Structure of human galactokinase 1 bound with Ethyl 1-(2-pyrazinyl)-4-piperidinecarboxylate
To Be Published
6Y3X
DownloadVisualize
BU of 6y3x by Molmil
Crystal structure of the Francisella novicida lysine decarboxylase LdcF
分子名称: Lysine decarboxylase
著者Felix, J, Siebert, C, Gutsche, I, Renesto, P.
登録日2020-02-19
公開日2021-01-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural and functional analysis of the Francisella lysine decarboxylase as a key actor in oxidative stress resistance.
Sci Rep, 11, 2021
7AQ1
DownloadVisualize
BU of 7aq1 by Molmil
Crystal structure of human mature meprin beta in complex with the specific inhibitor MWT-S-270
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Linnert, M, Parthier, C, Fritz, C.
登録日2020-10-20
公開日2021-03-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.413 Å)
主引用文献Structure and Dynamics of Meprin beta in Complex with a Hydroxamate-Based Inhibitor.
Int J Mol Sci, 22, 2021
6ONW
DownloadVisualize
BU of 6onw by Molmil
Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Sel1 repeat protein
著者Chang, C, Tesar, C, Endres, M, Babnigg, G, Hassan, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2019-04-22
公開日2020-04-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
To Be Published
9I69
DownloadVisualize
BU of 9i69 by Molmil
Crystal structure of human Cdc20 bound to synthetic D-box peptide D20
分子名称: ARG-ALA-PRO-0JY-SER-ASP, Cell division cycle protein 20 homolog
著者Eapen, R, Okoye, C, Stubbs, C, Schimpl, M, Tischer, T, Fisher, E.J, Zacharopoulou, M, Ferrer, F, Barford, D, Spring, D, Lindon, C, Phillips, C, Itzhaki, L.S.
登録日2025-01-29
公開日2025-02-12
実験手法X-RAY DIFFRACTION (1.463 Å)
主引用文献Development of D-box peptides to inhibit the Anaphase Promoting Complex/Cyclosome
To be published
6ORC
DownloadVisualize
BU of 6orc by Molmil
Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
分子名称: Sel1 repeat protein
著者Chang, C, Tesar, C, Endres, M, Babnigg, G, Hassan, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2019-04-29
公開日2020-05-06
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
To Be Published
9I6A
DownloadVisualize
BU of 9i6a by Molmil
Crystal structure of human Cdc20 bound to synthetic D-box peptide D7
分子名称: ALA-PRO-0JY-GLY, Cell division cycle protein 20 homolog
著者Eapen, R, Okoye, C, Stubbs, C, Schimpl, M, Tischer, T, Fisher, E.J, Zacharopoulou, M, Ferrer, F, Barford, D, Spring, D, Lindon, C, Phillips, C, Itzhaki, L.S.
登録日2025-01-29
公開日2025-02-12
実験手法X-RAY DIFFRACTION (1.915 Å)
主引用文献Development of D-box peptides to inhibit the Anaphase Promoting Complex/Cyclosome
To be published
9I68
DownloadVisualize
BU of 9i68 by Molmil
Crystal structure of human Cdc20 bound to synthetic D-box peptide D21
分子名称: ARG-ALA-PRO-3EG-SER-ASP, Cell division cycle protein 20 homolog
著者Eapen, R, Okoye, C, Stubbs, C, Schimpl, M, Tischer, T, Fisher, E.J, Zacharopoulou, M, Ferrer, F, Barford, D, Spring, D, Lindon, C, Phillips, C, Itzhaki, L.S.
登録日2025-01-29
公開日2025-02-12
実験手法X-RAY DIFFRACTION (1.505 Å)
主引用文献Development of D-box peptides to inhibit the Anaphase Promoting Complex/Cyclosome
To be published
4Y7B
DownloadVisualize
BU of 4y7b by Molmil
Factor Xa complex with GTC000441
分子名称: 6-chloro-N-{(3S)-1-[(2S)-1-{(1R,5S)-7-[2-(methylamino)ethyl]-3,7-diazabicyclo[3.3.1]non-3-yl}-1-oxopropan-2-yl]-2-oxopy rrolidin-3-yl}naphthalene-2-sulfonamide, CALCIUM ION, Coagulation factor X
著者Convery, M.A, Young, R.J, Senger, S, Hamblin, J.N, Chan, C, Toomey, J.R, Watson, N.S.
登録日2015-02-13
公開日2015-09-30
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Factor Xa complex with GTC000441
to be published
6QE6
DownloadVisualize
BU of 6qe6 by Molmil
Structure of M. capricolum TrmK in complex with the natural cofactor product S-adenosyl-homocysteine (SAH)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (Adenine(22)-N(1))-methyltransferase
著者Oerum, S, Catala, M, Atdjian, C, Brachet, F, Ponchon, L, Barraud, P, Iannazzo, L, Droogmans, L, Braud, E, Etheve-Quelquejeu, M, Tisne, C.
登録日2019-01-04
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Bisubstrate analogues as structural tools to investigate m6A methyltransferase active sites.
Rna Biol., 16, 2019
7B62
DownloadVisualize
BU of 7b62 by Molmil
Crystal structure of SARS-CoV-2 spike protein N-terminal domain in complex with biliverdin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, DI(HYDROXYETHYL)ETHER, ...
著者Pye, V.E, Rosa, A, Roustan, C, Cherepanov, P.
登録日2020-12-07
公開日2021-04-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献SARS-CoV-2 can recruit a heme metabolite to evade antibody immunity.
Sci Adv, 7, 2021
6VQ5
DownloadVisualize
BU of 6vq5 by Molmil
Crystal Structure of Epiphyas postvittana Pheromone Binding Protein 3
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Pheromome Binding Protein
著者Hamiaux, C, Carraher, C.
登録日2020-02-04
公開日2020-10-14
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Epiphyas postvittana pheromone binding protein 3.
Sci Rep, 10, 2020
5LWP
DownloadVisualize
BU of 5lwp by Molmil
Discovery of phenoxyindazoles and phenylthioindazoles as RORg inverse agonists
分子名称: 4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid, Nuclear receptor ROR-gamma
著者Ouvry, G, Bouix-Peter, C, Ciesielski, F, Chantalat, L, Christin, O, Comino, C, Duvert, D, Feret, C, Harris, C.S, Luzy, A.-P, Musicki, B, Orfila, D, Pascau, J, Parnet, V, Perrin, A, Pierre, R, Raffin, C, Rival, Y, Taquet, N, Thoreau, E, Hennequin, L.F.
登録日2016-09-19
公開日2016-11-16
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of phenoxyindazoles and phenylthioindazoles as ROR gamma inverse agonists.
Bioorg.Med.Chem.Lett., 26, 2016
8D8O
DownloadVisualize
BU of 8d8o by Molmil
Cryo-EM structure of substrate unbound PAPP-A
分子名称: Pappalysin-1, ZINC ION
著者Judge, R.A, Jain, R, Hao, Q, Ouch, C, Sridar, J, Smith, C.L, Wang, J.C.K, Eaton, D.
登録日2022-06-08
公開日2022-09-28
最終更新日2025-01-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structure of the PAPP-ABP5 complex reveals mechanism of substrate recognition
Nat Commun, 13, 2022
6OK3
DownloadVisualize
BU of 6ok3 by Molmil
Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
著者Chang, C, Tesar, C, Endres, M, Babnigg, G, Hassan, H, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2019-04-12
公開日2020-04-15
最終更新日2025-04-02
実験手法X-RAY DIFFRACTION (2.353 Å)
主引用文献Crystal structure of Sel1 repeat protein from Oxalobacter formigenes
To Be Published
6QE5
DownloadVisualize
BU of 6qe5 by Molmil
Structure of E.coli RlmJ in complex with the natural cofactor product S-adenosyl-homocysteine (SAH)
分子名称: Ribosomal RNA large subunit methyltransferase J, S-ADENOSYL-L-HOMOCYSTEINE
著者Oerum, S, Catala, M, Atdjian, C, Brachet, F, Ponchon, L, Barraud, P, Iannazzo, L, Droogmans, L, Braud, E, Etheve-Quelquejeu, M, Tisne, C.
登録日2019-01-04
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Bisubstrate analogues as structural tools to investigate m6A methyltransferase active sites.
Rna Biol., 16, 2019

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon