Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8GWF
DownloadVisualize
BU of 8gwf by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Helicase, Non-structural protein 7, ...
著者Yan, L.Y, Huang, Y.C, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2023-01-11
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWG
DownloadVisualize
BU of 8gwg by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Helicase, Non-structural protein 7, ...
著者Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2022-12-14
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWN
DownloadVisualize
BU of 8gwn by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibitor of AT-527
分子名称: Helicase, Non-structural protein 7, Non-structural protein 8, ...
著者Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2022-12-14
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWI
DownloadVisualize
BU of 8gwi by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Helicase, Non-structural protein 7, ...
著者Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2022-12-14
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
6CTE
DownloadVisualize
BU of 6cte by Molmil
77Se-NMR probes the protein environment of selenomethionine
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
著者Chen, Q, Rozovsky, S.
登録日2018-03-22
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 124, 2020
8GW1
DownloadVisualize
BU of 8gw1 by Molmil
A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analogue inhibitors
分子名称: Helicase, MANGANESE (II) ION, Non-structural protein 7, ...
著者Yan, L, Rao, Z, Lou, Z.
登録日2022-09-16
公開日2023-10-25
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWM
DownloadVisualize
BU of 8gwm by Molmil
SARS-CoV-2 E-RTC bound with MMP-nsp9 and GMPPNP
分子名称: 2'-deoxy-2'-fluoro-2'-methyluridine 5'-(trihydrogen diphosphate), Helicase, Non-structural protein 7, ...
著者Yan, L.M, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
8GWK
DownloadVisualize
BU of 8gwk by Molmil
SARS-CoV-2 RNA E-RTC complex with RMP-nsp9 and GMPPNP
分子名称: Helicase, MAGNESIUM ION, Non-structural protein 7, ...
著者Yan, L.M, Huang, Y.C, Ge, J, Liu, Z.Y, Gao, Y, Rao, Z.H, Lou, Z.Y.
登録日2022-09-17
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献A mechanism for SARS-CoV-2 RNA capping and its inhibition by nucleotide analog inhibitors.
Cell, 185, 2022
6CPZ
DownloadVisualize
BU of 6cpz by Molmil
Selenomethionine mutant (I6Sem) of protein GB1 examined by X-ray diffraction
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Immunoglobulin G-binding protein G, ...
著者Chen, Q, Rozovsky, S.
登録日2018-03-14
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 124, 2020
6OC0
DownloadVisualize
BU of 6oc0 by Molmil
Crystal structure of human DHODH with OSU-03012
分子名称: Dihydroorotate dehydrogenase (quinone), mitochondrial, FLAVIN MONONUCLEOTIDE, ...
著者Durst, M.A, Lavie, A.
登録日2019-03-21
公開日2019-11-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Metabolic Modifier Screen Reveals Secondary Targets of Protein Kinase Inhibitors within Nucleotide Metabolism.
Cell Chem Biol, 27, 2020
3RZ3
DownloadVisualize
BU of 3rz3 by Molmil
Human Cdc34 E2 in complex with CC0651 inhibitor
分子名称: 4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acid, Ubiquitin-conjugating enzyme E2 R1
著者Ceccarelli, D.F, Webb, D.R, Sicheri, F.
登録日2011-05-11
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献An allosteric inhibitor of the human cdc34 ubiquitin conjugating enzyme
Cell(Cambridge,Mass.), 145, 2011
6CNE
DownloadVisualize
BU of 6cne by Molmil
Selenomethionine variant (V29SeM) of protein GB1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Immunoglobulin G-binding protein G, PHOSPHATE ION
著者Chen, Q.
登録日2018-03-08
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 124, 2020
6CHE
DownloadVisualize
BU of 6che by Molmil
Selenomethionine mutant (A34Sem) of protein GB1 examined by X-ray diffraction
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, IMIDAZOLE, Immunoglobulin G-binding protein G
著者Chen, Q.
登録日2018-02-22
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 124, 2020
6C9O
DownloadVisualize
BU of 6c9o by Molmil
Selenomethionine mutant (V29Sem) of protein GB1 examined by X-ray diffraction
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Immunoglobulin G-binding protein G
著者Chen, Q.
登録日2018-01-28
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献77Se NMR Probes the Protein Environment of Selenomethionine.
J.Phys.Chem.B, 2020
5GT2
DownloadVisualize
BU of 5gt2 by Molmil
Crystal Structure and Biochemical Features of dye-decolorizing peroxidase YfeX from Escherichia coli O157
分子名称: PROTOPORPHYRIN IX CONTAINING FE, Probable deferrochelatase/peroxidase YfeX
著者Ma, Y.L, Yuan, Z.G, Liu, S, Wang, J.X, Gu, L.C, Liu, X.H.
登録日2016-08-18
公開日2017-02-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献Crystal structure and biochemical features of dye-decolorizing peroxidase YfeX from Escherichia coli O157 Asp(143) and Arg(232) play divergent roles toward different substrates
Biochem. Biophys. Res. Commun., 484, 2017
7TUU
DownloadVisualize
BU of 7tuu by Molmil
Structure of the SARS-CoV-2 main protease in complex with halicin
分子名称: 3C-like proteinase nsp5, 5-nitro-1,3-thiazole
著者Yang, K.S, Liu, W.R.
登録日2022-02-03
公開日2022-08-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Repurposing Halicin as a potent covalent inhibitor for the SARS-CoV-2 main protease.
Curr Res Chem Biol, 2, 2022
7UU9
DownloadVisualize
BU of 7uu9 by Molmil
Crystal structure of the SARS-CoV-2 main protease in its apo-form
分子名称: 3C-like proteinase nsp5
著者Yang, K.S, Liu, W.R.
登録日2022-04-28
公開日2023-01-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献A Novel Y-Shaped, S-O-N-O-S-Bridged Cross-Link between Three Residues C22, C44, and K61 Is Frequently Observed in the SARS-CoV-2 Main Protease.
Acs Chem.Biol., 18, 2023
3GFE
DownloadVisualize
BU of 3gfe by Molmil
Crystal Structure of p38a Mitogen-Activated Protein Kinase in Complex with a Pyrazolopyridinone Inhibitor
分子名称: Mitogen-activated protein kinase 14, N-cyclopropyl-3-{[1-(2,4-difluorophenyl)-7-methyl-6-oxo-6,7-dihydro-1H-pyrazolo[3,4-b]pyridin-4-yl]amino}-4-methylbenzamide
著者Mohr, C, Jordan, S.
登録日2009-02-26
公開日2009-07-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Part 1: Structure-Activity Relationship (SAR) investigations of fused pyrazoles as potent, selective and orally available inhibitors of p38alpha mitogen-activated protein kinase.
Bioorg.Med.Chem.Lett., 19, 2009
8HLO
DownloadVisualize
BU of 8hlo by Molmil
Crystal structure of ASAP1-SH3 and MICAL1-PRM complex
分子名称: Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1, Proline rich motif from MICAL1, ...
著者Niu, F, Wei, Z, Yu, C.
登録日2022-11-30
公開日2023-02-22
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.168 Å)
主引用文献Crystal Structure of the SH3 Domain of ASAP1 in Complex with the Proline Rich Motif (PRM) of MICAL1 Reveals a Unique SH3/PRM Interaction Mode.
Int J Mol Sci, 24, 2023
4QNC
DownloadVisualize
BU of 4qnc by Molmil
Crystal structure of a SemiSWEET in an occluded state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PENTADECANE, chemical transport protein
著者Yan, X, Yuyong, T, Liang, F, Perry, K.
登録日2014-06-17
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.388 Å)
主引用文献Structures of bacterial homologues of SWEET transporters in two distinct conformations.
Nature, 515, 2014
4QND
DownloadVisualize
BU of 4qnd by Molmil
Crystal structure of a SemiSWEET
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Chemical transport protein, ...
著者Yan, X, Yuyong, T, Liang, F, Perry, K.
登録日2014-06-17
公開日2014-09-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Structures of bacterial homologues of SWEET transporters in two distinct conformations.
Nature, 515, 2014
8GOY
DownloadVisualize
BU of 8goy by Molmil
SulE P44R
分子名称: 5-[(4,6-dimethoxypyrimidin-2-yl)carbamoylsulfamoyl]-1-methyl-pyrazole-4-carboxylic acid, Alpha/beta fold hydrolase, GLYCEROL
著者Liu, B, He, J, Ran, T, Wang, W.
登録日2022-08-25
公開日2023-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.784 Å)
主引用文献Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
Nat Commun, 14, 2023
8GP0
DownloadVisualize
BU of 8gp0 by Molmil
crystal structure of SulE
分子名称: Alpha/beta fold hydrolase, CITRIC ACID, GLYCEROL
著者Liu, B, Ran, T, wang, W, He, J.
登録日2022-08-25
公開日2023-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
Nat Commun, 14, 2023
8GOL
DownloadVisualize
BU of 8gol by Molmil
crystal structure of SulE
分子名称: 2-[(4-chloranyl-6-methoxy-pyrimidin-2-yl)carbamoylsulfamoyl]benzoic acid, Alpha/beta fold hydrolase, GLYCEROL
著者Liu, B, Ran, T, Wang, W, He, J.
登録日2022-08-25
公開日2023-08-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structures of herbicide-detoxifying esterase reveal a lid loop affecting substrate binding and activity.
Nat Commun, 14, 2023
5HXB
DownloadVisualize
BU of 5hxb by Molmil
Cereblon in complex with DDB1, CC-885, and GSPT1
分子名称: 1-(3-chloro-4-methylphenyl)-3-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}methyl)urea, DNA damage-binding protein 1, Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, ...
著者Chamberlain, P.P, Matyskiela, M, Pagarigan, B.
登録日2016-01-30
公開日2016-06-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A novel cereblon modulator recruits GSPT1 to the CRL4(CRBN) ubiquitin ligase.
Nature, 535, 2016

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon