Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5Z5A
DownloadVisualize
BU of 5z5a by Molmil
Crystal structure of Tk-PTP in the active form
分子名称: Protein-tyrosine phosphatase, VANADATE ION
著者Ku, B, Yun, H.Y, Kim, S.J.
登録日2018-01-17
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural study reveals the temperature-dependent conformational flexibility of Tk-PTP, a protein tyrosine phosphatase from Thermococcus kodakaraensis KOD1
PLoS ONE, 13, 2018
3WUU
DownloadVisualize
BU of 3wuu by Molmil
Structure basis of inactivating cell abscission with chimera peptide 1
分子名称: Centrosomal protein of 55 kDa, TEX-14
著者Kim, H.J, Matsuura, A, Lee, H.H.
登録日2014-05-05
公開日2015-07-15
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.904 Å)
主引用文献Structural and biochemical insights into the role of testis-expressed gene 14 (TEX14) in forming the stable intercellular bridges of germ cells.
Proc.Natl.Acad.Sci.USA, 112, 2015
6PLN
DownloadVisualize
BU of 6pln by Molmil
X-ray crystal structure of Pyrococcus furiosus general transcription factor TFE-alpha
分子名称: Transcription factor E
著者Murakami, K.S, Jun, S.H.
登録日2019-07-01
公開日2020-07-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Direct binding of TFE alpha opens DNA binding cleft of RNA polymerase.
Nat Commun, 11, 2020
6PWW
DownloadVisualize
BU of 6pww by Molmil
Cryo-EM structure of MLL1 in complex with RbBP5 and WDR5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
7DIB
DownloadVisualize
BU of 7dib by Molmil
Crystal structure of D-threonine aldolase from Filomicrobium marinum
分子名称: D-threonine aldolase
著者Seo, H, Kim, K.-J.
登録日2020-11-18
公開日2021-08-04
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Cbeta-Selective Aldol Addition of d-Threonine Aldolase by Spatial Constraint of Aldehyde Binding.
Acs Catalysis, 11, 2021
6PWX
DownloadVisualize
BU of 6pwx by Molmil
Cryo-EM structure of RbBP5 bound to the nucleosome
分子名称: DNA (146-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
6PWV
DownloadVisualize
BU of 6pwv by Molmil
Cryo-EM structure of MLL1 core complex bound to the nucleosome
分子名称: DNA (147-MER), Histone H2A type 1, Histone H2B 1.1, ...
著者Park, S.H, Ayoub, A, Lee, Y.T, Xu, J, Zhang, W, Zhang, B, Zhang, Y, Cianfrocco, M.A, Su, M, Dou, Y, Cho, U.
登録日2019-07-23
公開日2019-12-18
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (6.2 Å)
主引用文献Cryo-EM structure of the human MLL1 core complex bound to the nucleosome.
Nat Commun, 10, 2019
5X1E
DownloadVisualize
BU of 5x1e by Molmil
Structure of DotL(656-783)-IcmS-IcmW derived from Legionella pneumophila
分子名称: IcmO (DotL), IcmS, IcmW
著者Kim, J.D, Kwak, M.J, Oh, B.H.
登録日2017-01-25
公開日2017-06-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
5X1U
DownloadVisualize
BU of 5x1u by Molmil
Structure of the cytosolic domain of DotM derived from Legionella pneumophila
分子名称: Uncharacterized protein
著者Kwak, M.J, Kim, Y.G, Oh, B.H.
登録日2017-01-26
公開日2017-06-14
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
5X42
DownloadVisualize
BU of 5x42 by Molmil
Structure of DotL(590-659)-DotN derived from Legionella pneumophila
分子名称: DotN, IcmJ (DotN), IcmO (DotL), ...
著者Kwak, M.J, Kim, J.D, Oh, B.H.
登録日2017-02-09
公開日2017-06-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017
6TL8
DownloadVisualize
BU of 6tl8 by Molmil
Structural basis of SALM3 dimerization and adhesion complex formation with the presynaptic receptor protein tyrosine phosphatases
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Myeloid cell surface antigen CD33,Leucine-rich repeat and fibronectin type-III domain-containing protein 4
著者Karki, S, Shkumatov, A.V, Bae, S, Ko, J, Kajander, T.
登録日2019-12-02
公開日2020-07-22
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of SALM3 dimerization and synaptic adhesion complex formation with PTP sigma.
Sci Rep, 10, 2020
7VFN
DownloadVisualize
BU of 7vfn by Molmil
Crystal structure of SdgB (SD peptide-binding form)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFM
DownloadVisualize
BU of 7vfm by Molmil
Crystal structure of SdgB (UDP and SD peptide-binding form)
分子名称: Glycosyl transferase, group 1 family protein, SER-ASP-SER-ASP, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFL
DownloadVisualize
BU of 7vfl by Molmil
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFO
DownloadVisualize
BU of 7vfo by Molmil
Crystal structure of SdgB (Phosphate-binding form)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFK
DownloadVisualize
BU of 7vfk by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC1
DownloadVisualize
BU of 7ec1 by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2021-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC3
DownloadVisualize
BU of 7ec3 by Molmil
Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
DownloadVisualize
BU of 7ec6 by Molmil
Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC7
DownloadVisualize
BU of 7ec7 by Molmil
Crystal structure of SdgB (complexed with phosphate ions)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
6I60
DownloadVisualize
BU of 6i60 by Molmil
Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum
分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, Alpha-rhamnosidase, TRIETHYLENE GLYCOL
著者Lafite, P, Daniellou, R.
登録日2018-11-15
公開日2019-02-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.743 Å)
主引用文献Biochemical Characterization of the alpha-l-RhamnosidaseDtRha fromDictyoglomus thermophilum: Application to the Selective Derhamnosylation of Natural Flavonoids.
Acs Omega, 4, 2019
6VAT
DownloadVisualize
BU of 6vat by Molmil
Structure of the periplasmic domain of YejM from Salmonella typhimurium
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, ETHANOLAMINE, ...
著者Gabale, U, Ressl, S.
登録日2019-12-17
公開日2020-08-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The essential inner membrane protein YejM is a metalloenzyme.
Sci Rep, 10, 2020
6VC7
DownloadVisualize
BU of 6vc7 by Molmil
Structure of the F349A mutant of the periplasmic domain of YejM from Salmonella typhimurium
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, ETHANOLAMINE, ...
著者Gabale, U, Ressl, S.
登録日2019-12-20
公開日2020-08-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The essential inner membrane protein YejM is a metalloenzyme.
Sci Rep, 10, 2020
6VDF
DownloadVisualize
BU of 6vdf by Molmil
Structure of the periplasmic domain of YejM from Salmonella typhimurium (twinned)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
著者Gabale, U, Ressl, S.
登録日2019-12-25
公開日2020-08-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The essential inner membrane protein YejM is a metalloenzyme.
Sci Rep, 10, 2020
3SH4
DownloadVisualize
BU of 3sh4 by Molmil
Laminin G like domain 3 from human perlecan
分子名称: LG3 peptide
著者Van Le, B, Kim, K.K.
登録日2011-06-15
公開日2011-12-14
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of the LG3 Domain of Endorepellin, an Angiogenesis Inhibitor.
J.Mol.Biol., 414, 2011

220472

件を2024-05-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon