Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4IX7
DownloadVisualize
BU of 4ix7 by Molmil
Crystal Structure of the insv-BEN domain complexed to its DNA target site
分子名称: 5'-D(*GP*TP*TP*CP*CP*AP*AP*TP*TP*GP*GP*AP*A)-3', RE55538p
著者Ren, A, Serganov, A, Patel, D.J.
登録日2013-01-24
公開日2013-03-20
最終更新日2013-04-03
実験手法X-RAY DIFFRACTION (1.581 Å)
主引用文献The BEN domain is a novel sequence-specific DNA-binding domain conserved in neural transcriptional repressors.
Genes Dev., 27, 2013
5K1W
DownloadVisualize
BU of 5k1w by Molmil
Crystal structure of oxidized Shewanella Yellow Enzyme 4 (SYE4) in complex with trinitrophenol
分子名称: FLAVIN MONONUCLEOTIDE, NAD(P)H:flavin oxidoreductase Sye4, Octadecane, ...
著者Elegheert, J, Brige, A, Savvides, S.N.
登録日2016-05-18
公開日2017-06-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural dissection of Shewanella oneidensis old yellow enzyme 4 bound to a Meisenheimer complex and (nitro)phenolic ligands.
FEBS Lett., 591, 2017
8AFA
DownloadVisualize
BU of 8afa by Molmil
Cryo-EM structure of a substrate-bound glutamate transporter homologue GltTk encapsulated within a nanodisc
分子名称: ASPARTIC ACID, Proton/glutamate symporter, SDF family
著者Whittaker, J.J, Guskov, A.
登録日2022-07-16
公開日2023-04-05
最終更新日2023-04-12
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Mutation in glutamate transporter homologue GltTk provides insights into pathologic mechanism of episodic ataxia 6.
Nat Commun, 14, 2023
4RBM
DownloadVisualize
BU of 4rbm by Molmil
Porphyromonas gingivalis gingipain K (Kgp) catalytic and immunoglobulin superfamily-like domains
分子名称: (3S)-3,7-diaminoheptan-2-one, ACETATE ION, AZIDE ION, ...
著者de Diego, I, Veillard, F, Sztukowska, M.N, Guevara, T, Potempa, B, Pomowski, A, Huntington, J.A, Potempa, J, Gomis-Ruth, F.X.
登録日2014-09-12
公開日2014-10-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure and Mechanism of Cysteine Peptidase Gingipain K (Kgp), a Major Virulence Factor of Porphyromonas gingivalis in Periodontitis.
J.Biol.Chem., 289, 2014
4QSP
DownloadVisualize
BU of 4qsp by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with acetyl-lysine
分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, N(6)-ACETYLLYSINE, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-06
公開日2014-07-23
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
3SHE
DownloadVisualize
BU of 3she by Molmil
Novel ATP-competitive MK2 inhibitors with potent biochemical and cell-based activity throughout the series
分子名称: MAP kinase-activated protein kinase 3, N-{4-[(3S)-4'-oxo-1',4',5',6'-tetrahydrospiro[piperidine-3,7'-pyrrolo[3,2-c]pyridin]-2'-yl]pyridin-2-yl}-3-(trifluoromethyl)benzamide
著者Oubrie, A, Kazemier, B.
登録日2011-06-16
公開日2011-12-14
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Novel ATP competitive MK2 inhibitors with potent biochemical and cell-based activity throughout the series.
Bioorg.Med.Chem.Lett., 22, 2012
4QSV
DownloadVisualize
BU of 4qsv by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) in complex with thymidine
分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, SULFATE ION, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-06
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
7QRF
DownloadVisualize
BU of 7qrf by Molmil
Structure of the dimeric complex between precursor membrane ectodomain (prM) and envelope protein ectodomain (E) from tick-borne encephalitis virus
分子名称: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Envelope protein E, ...
著者Vaney, M.C, Rouvinski, A, Rey, F.A.
登録日2022-01-11
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Evolution and activation mechanism of the flavivirus class II membrane-fusion machinery.
Nat Commun, 13, 2022
5JRO
DownloadVisualize
BU of 5jro by Molmil
The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
分子名称: FMN-dependent NADH-azoreductase, GLYCEROL
著者Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-05-06
公開日2016-06-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献The crystal structure of azoreductase from Yersinia pestis CO92 in its Apo form
To Be Published
8SYI
DownloadVisualize
BU of 8syi by Molmil
Cyanobacterial RNAP-EC
分子名称: DNA (37-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Qayyum, M.Z, Imashimizu, M, Leanca, M, Vishwakarma, R.K, Bradley Riaz, A, Yuzenkova, Y, Murakami, K.S.
登録日2023-05-25
公開日2023-07-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献Structure and function of the Si3 insertion integrated into the trigger loop/helix of cyanobacterial RNA polymerase.
Proc.Natl.Acad.Sci.USA, 121, 2024
7OHG
DownloadVisualize
BU of 7ohg by Molmil
Structure of Thermus thermophilus Rel bound to the non-hydrolasable alarmone analogue
分子名称: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
著者Garcia-Pino, A.
登録日2021-05-11
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献Structure of Thermus thermophilus Rel bound to the non-hydrolasable alarmone analogue
To Be Published
5K9X
DownloadVisualize
BU of 5k9x by Molmil
Crystal structure of Tryptophan synthase alpha chain from Legionella pneumophila subsp. pneumophila
分子名称: Tryptophan synthase alpha chain
著者Chang, C, Hatzos-Skintges, C, Endres, M, ANDERSON, W.F, JOACHIMIAK, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-06-01
公開日2016-06-15
実験手法X-RAY DIFFRACTION (2.016 Å)
主引用文献Crystal structure of Tryptophan synthase alpha chain from Legionella pneumophila subsp. pneumophila
To Be Published
4QSQ
DownloadVisualize
BU of 4qsq by Molmil
Structure of the bromodomain of human ATPase family AAA domain-containing protein 2 (ATAD2) with bound DMSO
分子名称: 1,2-ETHANEDIOL, ATPase family AAA domain-containing protein 2, DIMETHYL SULFOXIDE, ...
著者Chaikuad, A, Felletar, I, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
登録日2014-07-06
公開日2014-07-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-based approaches towards identification of fragments for the low-druggability ATAD2 bromodomain
MedChemComm, 5, 2014
5KBL
DownloadVisualize
BU of 5kbl by Molmil
Candida Albicans Superoxide Dismutase 5 (SOD5), E110Q Mutant
分子名称: COPPER (I) ION, Cell surface Cu-only superoxide dismutase 5, SULFATE ION
著者Galaleldeen, A, Peterson, R.L, Villarreal, J, Taylor, A.B, Hart, P.J.
登録日2016-06-03
公開日2016-08-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.414 Å)
主引用文献The Phylogeny and Active Site Design of Eukaryotic Copper-only Superoxide Dismutases.
J.Biol.Chem., 291, 2016
7OGS
DownloadVisualize
BU of 7ogs by Molmil
X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to an interferon-stimulated response element
分子名称: DNA (5'-D(P*AP*TP*AP*AP*CP*TP*GP*AP*AP*AP*CP*CP*GP*AP*AP*AP*GP*TP*AP*C)-3'), DNA (5'-D(P*TP*GP*TP*AP*CP*TP*TP*TP*CP*GP*GP*TP*TP*TP*CP*AP*GP*TP*TP*A)-3'), Interferon regulatory factor 4
著者Agnarelli, A, El Omari, K, Alt, A.O, Mancini, E.J.
登録日2021-05-07
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.37 Å)
主引用文献X-ray Structure of Interferon Regulatory Factor 4 DNA binding domain bound to interferon-stimulated response element
To Be Published
7OIW
DownloadVisualize
BU of 7oiw by Molmil
Structure of S. aureus Rel catalytic domains in complex with pppGpp
分子名称: GLYCEROL, GTP pyrophosphokinase, IODIDE ION, ...
著者Garcia-Pino, A.
登録日2021-05-12
公開日2022-06-01
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献Structure of S. aureus Rel catalytic domains in complex with pppGpp
To Be Published
4QUQ
DownloadVisualize
BU of 4quq by Molmil
Crystal structure of stachydrine demethylase in complex with azide
分子名称: AZIDE ION, COBALT HEXAMMINE(III), FE (III) ION, ...
著者Agarwal, R, Andi, B, Gizzi, A, Bonanno, J.B, Almo, S.C, Orville, A.M.
登録日2014-07-11
公開日2015-07-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.266 Å)
主引用文献Tracking photoelectron induced in-crystallo enzyme catalysis
To be Published
8SW7
DownloadVisualize
BU of 8sw7 by Molmil
BG505 Boost2 SOSIP.664 in complex with NHP polyclonal antibody FP1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 Boost 2 gp120, BG505 Boost 2 gp41, ...
著者Pratap, P.P, Antansijevic, A, Ozorowski, G, Ward, A.B.
登録日2023-05-17
公開日2023-07-26
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Focusing antibody responses to the fusion peptide in rhesus macaques.
Biorxiv, 2023
7NUP
DownloadVisualize
BU of 7nup by Molmil
Endoplasmic reticulum aminopeptidase 2 complexed with a mixed hydroxamic and sulfonyl ligand
分子名称: (3~{S})-4-(4-hydroxyphenyl)-~{N}-oxidanyl-3-[5-[[(5-phenylthiophen-2-yl)sulfonylamino]methyl]-1,2,3-triazol-1-yl]butanamide, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Mpakali, A, Giastas, P, Stratikos, E.
登録日2021-03-12
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Endoplasmic reticulum aminopeptidase 2 complexed with a mixed hydroxamic and sulfonyl ligand
To Be Published
4QYB
DownloadVisualize
BU of 4qyb by Molmil
2.1 Angstrom resolution crystal structure of uncharacterized protein, disulfide-bridged dimer, from Burkholderia cenocepacia J2315
分子名称: Uncharacterized protein
著者Halavaty, A.S, Filippova, E.V, Minasov, G, Kiryukhina, O, Jedrzejczak, R, Shuvalova, L, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2014-07-24
公開日2014-08-13
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献2.1 Angstrom resolution crystal structure of uncharacterized protein, disulfide-bridged dimer, from Burkholderia cenocepacia J2315
To be Published
7NSK
DownloadVisualize
BU of 7nsk by Molmil
Endoplasmic reticulum aminopeptidase 2 complexed with a hydroxamic ligand
分子名称: (2~{S})-3-(4-hydroxyphenyl)-~{N}-oxidanyl-2-[4-[[(5-pyridin-2-ylthiophen-2-yl)sulfonylamino]methyl]-1,2,3-triazol-1-yl]propanamide, 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, ...
著者Mpakali, A, Giastas, P, Stratikos, E.
登録日2021-03-08
公開日2022-06-22
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Endoplasmic reticulum aminopeptidase 2 in complex with a phosphinic ligand
To Be Published
8SYF
DownloadVisualize
BU of 8syf by Molmil
Homology model of Acto-HMM complex in ADP-state. Chicken smooth muscle HMM and chicken pectoralis actin
分子名称: Actin, alpha skeletal muscle, Myosin light polypeptide 6, ...
著者Hojjatian, A, Taylor, D.W, Daneshparvar, N, Trybus, K.M, Taylor, K.A.
登録日2023-05-25
公開日2023-08-30
実験手法ELECTRON MICROSCOPY (19 Å)
主引用文献Double-headed binding of myosin II to F-actin shows the effect of strain on head structure.
J.Struct.Biol., 215, 2023
7O23
DownloadVisualize
BU of 7o23 by Molmil
C-terminal head domain of the trimeric autotransporter adhesin BpaC from Burkholderia pseudomallei fused to a GCN4 anchor
分子名称: Autotransporter adhesin BpaC,Autotransporter adhesin BpaC,General control transcription factor GCN4, GLYCEROL, SODIUM ION
著者Kiessling, A.R, Goldman, A.
登録日2021-03-30
公開日2022-06-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The C-terminal head domain of Burkholderia pseudomallei BpaC has a striking hydrophilic core with an extensive solvent network.
Mol.Microbiol., 118, 2022
5K04
DownloadVisualize
BU of 5k04 by Molmil
The NatB Acetyltransferase Complex Bound To CoA and MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COENZYME A, N-terminal acetyltransferase B complex subunit NAT3, ...
著者Hong, H, Cai, Y, Zhang, S, Han, A.
登録日2016-05-17
公開日2017-04-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular Basis of Substrate Specific Acetylation by N-Terminal Acetyltransferase NatB
Structure, 25, 2017
4R2Y
DownloadVisualize
BU of 4r2y by Molmil
Crystal structure of APC11 RING domain
分子名称: Anaphase-promoting complex subunit 11, ZINC ION
著者Brown, N.G, Watson, E.R, Weissmann, F, Jarvis, M.A, Vanderlinden, R, Grace, C.R.R, Frye, J.J, Dube, P, Qiao, R, Petzold, G, Cho, S.E, Alsharif, O, Bao, J, Zheng, J, Nourse, A, Kurinov, I, Peters, J.M, Stark, H, Schulman, B.A.
登録日2014-08-13
公開日2014-10-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.755 Å)
主引用文献Mechanism of Polyubiquitination by Human Anaphase-Promoting Complex: RING Repurposing for Ubiquitin Chain Assembly.
Mol.Cell, 56, 2014

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon