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4Y5D
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BU of 4y5d by Molmil
CRYSTAL STRUCTURE OF ALiS2-STREPTAVIDIN COMPLEX
分子名称: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, DIMETHYL SULFOXIDE, HEXAETHYLENE GLYCOL, ...
著者Sugiyama, S, Terai, T, Kohno, M, Ishida, H, Nagano, T.
登録日2015-02-11
公開日2015-09-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Artificial Ligands of Streptavidin (ALiS): Discovery, Characterization, and Application for Reversible Control of Intracellular Protein Transport
J.Am.Chem.Soc., 137, 2015
7WIS
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BU of 7wis by Molmil
Catalytic intermediate structure of N381A mutant of copper amine oxidase from Arthrobacter globiformis
分子名称: COPPER (II) ION, GLYCEROL, PHENYLACETALDEHYDE, ...
著者Murakawa, T, Okajima, T.
登録日2022-01-04
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase.
Chem Sci, 13, 2022
7WIR
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BU of 7wir by Molmil
Holo form of N381A mutant of copper amine oxidase from Arthrobacter globiformis
分子名称: COPPER (II) ION, GLYCEROL, Phenylethylamine oxidase
著者Murakawa, T, Okajima, T.
登録日2022-01-04
公開日2022-11-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Molecular mechanism of a large conformational change of the quinone cofactor in the semiquinone intermediate of bacterial copper amine oxidase.
Chem Sci, 13, 2022
7WRR
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BU of 7wrr by Molmil
X-ray structure of Thermus thermophilus HB8 transketorase in complex with TPP and MES
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
7WRT
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BU of 7wrt by Molmil
X-ray structure ofThermus thermophilus HB8 transketorase demonstrate in complex with TPP and D-erythrose-4-phosphate
分子名称: CALCIUM ION, ERYTHOSE-4-PHOSPHATE, THIAMINE DIPHOSPHATE, ...
著者Kamitori, S, Yoshihara, A.
登録日2022-01-27
公開日2022-12-07
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical characterizations of Thermus thermophilus HB8 transketolase producing a heptulose.
Appl.Microbiol.Biotechnol., 107, 2023
7WZ8
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BU of 7wz8 by Molmil
Structure of human langerin complex in Birbeck granules
分子名称: SNAP-tag,C-type lectin domain family 4 member K
著者Oda, T, Yanagisawa, H.
登録日2022-02-17
公開日2022-06-22
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Cryo-electron tomography of Birbeck granules reveals the molecular mechanism of langerin lattice formation.
Elife, 11, 2022
5X18
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BU of 5x18 by Molmil
Crystal structure of Casein kinase I homolog 1
分子名称: Casein kinase I homolog 1, GLYCEROL, MALONIC ACID
著者Kikuchi, M, Shinohara, Y, Ueda, H.R, Umehara, T.
登録日2017-01-25
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Temperature-Sensitive Substrate and Product Binding Underlie Temperature-Compensated Phosphorylation in the Clock
Mol. Cell, 67, 2017
5XKM
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BU of 5xkm by Molmil
Crystal structure of human phosphodiesterase 2A in complex with 6-methyl-N-(1-(4-(trifluoromethoxy)phenyl)propyl)pyrazolo[1,5-a]pyrimidine-3-carboxamide
分子名称: 6-methyl-N-[(1R)-1-[4-(trifluoromethyloxy)phenyl]propyl]pyrazolo[1,5-a]pyrimidine-3-carboxamide, MAGNESIUM ION, ZINC ION, ...
著者Oki, H, Kondo, M, Snell, G, Lane, W.
登録日2017-05-08
公開日2017-08-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Discovery of an Orally Bioavailable, Brain-Penetrating, in Vivo Active Phosphodiesterase 2A Inhibitor Lead Series for the Treatment of Cognitive Disorders.
J. Med. Chem., 60, 2017
6IG8
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BU of 6ig8 by Molmil
Crystal structure of CSF-1R kinase domain with a small molecular inhibitor, JTE-952
分子名称: (3-{4-[(4-cyclopropylphenyl)methoxy]-3-methoxyphenyl}azetidin-1-yl)(4-{[(2S)-2,3-dihydroxypropoxy]methyl}pyridin-2-yl)methanone, GLYCEROL, MAGNESIUM ION, ...
著者Doi, S, Adachi, T.
登録日2018-09-25
公開日2019-08-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of a novel azetidine scaffold for colony stimulating factor-1 receptor (CSF-1R) Type II inhibitors by the use of docking models.
Bioorg.Med.Chem.Lett., 29, 2019
1BTC
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BU of 1btc by Molmil
THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN
分子名称: BETA-AMYLASE, BETA-MERCAPTOETHANOL, Cyclohexakis-(1-4)-(alpha-D-glucopyranose), ...
著者Mikami, B, Hehre, E.J, Sato, M, Katsube, Y, Hirose, M, Morita, Y, Sacchettini, J.C.
登録日1993-02-18
公開日1993-10-31
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The 2.0-A resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin.
Biochemistry, 32, 1993
3HAT
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BU of 3hat by Molmil
ACTIVE SITE MIMETIC INHIBITION OF THROMBIN
分子名称: FPAM (FIBRINOPEPTIDE A MIMIC), Hirudin variant-2, Thrombin heavy chain, ...
著者Tulinsky, A, Mathews, I.I.
登録日1994-10-16
公開日1995-02-27
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Active-site mimetic inhibition of thrombin.
Acta Crystallogr.,Sect.D, 51, 1995
5TV0
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BU of 5tv0 by Molmil
crystal structure and light induced structural changes in orange carotenoid protein bound with 3 'OH echinenone
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, GLYCEROL, Orange carotenoid-binding protein
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.648 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3WC7
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BU of 3wc7 by Molmil
Carboxypeptidase B in complex with EF6265
分子名称: (2S)-7-amino-2-{[(R)-hydroxy{(1R)-2-methyl-1-[(3-phenylpropanoyl)amino]propyl}phosphoryl]methyl}heptanoic acid, Carboxypeptidase B, ZINC ION
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
3WAB
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BU of 3wab by Molmil
Carboxypeptidase B in complex with DD2
分子名称: (2R)-7-amino-2-(sulfanylmethyl)heptanoic acid, CACODYLATE ION, Carboxypeptidase B, ...
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-01
公開日2013-10-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.154 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
5TUX
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BU of 5tux by Molmil
crystal structure and light induced structural changes in orange carotenoid protein bound with echinenone
分子名称: GLYCEROL, Orange carotenoid-binding protein, beta,beta-caroten-4-one
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
3WC5
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BU of 3wc5 by Molmil
Carboxypeptidase B in complex with DD9
分子名称: (2R)-7-amino-2-(selanylmethyl)heptanoic acid, CACODYLATE ION, Carboxypeptidase B, ...
著者Yoshimoto, N, Itoh, T, Inaba, Y, Yamamoto, K.
登録日2013-05-24
公開日2013-10-02
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for inhibition of carboxypeptidase B by selenium-containing inhibitor: selenium coordinates to zinc in enzyme.
J.Med.Chem., 56, 2013
2LWI
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BU of 2lwi by Molmil
Solution structure of H-RasT35S mutant protein in complex with Kobe2601
分子名称: 2-(2,4-dinitrophenyl)-N-(4-fluorophenyl)hydrazinecarbothioamide, GTPase HRas, MAGNESIUM ION, ...
著者Araki, M, Tamura, A, Shima, F, Kataoka, T.
登録日2012-08-01
公開日2013-05-22
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献In silico discovery of small-molecule Ras inhibitors that display antitumor activity by blocking the Ras-effector interaction.
Proc.Natl.Acad.Sci.USA, 110, 2013
6L68
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BU of 6l68 by Molmil
X-ray structure of human galectin-10 in complex with D-allose
分子名称: Galectin-10, beta-D-allopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
5TUW
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BU of 5tuw by Molmil
Crystal structure of Orange Carotenoid Protein with partial loss of 3'OH Echinenone chromophore
分子名称: (3'R)-3'-hydroxy-beta,beta-caroten-4-one, GLYCEROL, Orange carotenoid-binding protein
著者Yang, X, Bandara, S, Ren, Z.
登録日2016-11-07
公開日2017-06-07
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Photoactivation mechanism of a carotenoid-based photoreceptor.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6L67
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BU of 6l67 by Molmil
X-ray structure of human galectin-10 in complex with D-galactose
分子名称: Galectin-10, beta-D-galactopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6D
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BU of 6l6d by Molmil
X-ray structure of human galectin-10 in complex with D-N-acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, Galectin-10
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6B
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BU of 6l6b by Molmil
X-ray structure of human galectin-10 in complex with L-fucose
分子名称: Galectin-10, beta-L-fucopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6C
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BU of 6l6c by Molmil
X-ray structure of human galectin-10 in complex with D-arabinose
分子名称: Galectin-10, alpha-D-arabinopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L64
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BU of 6l64 by Molmil
X-ray structure of human galectin-10 in complex with D-glucose
分子名称: Galectin-10, beta-D-glucopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020
6L6A
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BU of 6l6a by Molmil
X-ray structure of human galectin-10 in complex with D-mannose
分子名称: Galectin-10, beta-D-mannopyranose
著者Kamitori, S.
登録日2019-10-28
公開日2020-03-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structures of human galectin-10/monosaccharide complexes demonstrate potential of monosaccharides as effectors in forming Charcot-Leyden crystals.
Biochem.Biophys.Res.Commun., 2020

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