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1TO9
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BU of 1to9 by Molmil
Crystal structure of THI-4 protein from Bacillus subtilis
分子名称: 4-AMINO-5-HYDROXYMETHYL-2-METHYLPYRIMIDINE, THI-4 protein
著者Rajan, S.S, Shuvalova, L, Yang, X, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
登録日2004-06-14
公開日2004-08-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of THI-4 protein from Bacillus subtilis
To be Published
4Q2J
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BU of 4q2j by Molmil
A novel structure-based mechanism for DNA-binding of SATB1
分子名称: DNA-binding protein SATB1
著者Wang, Z, Long, J, Yang, X, Shen, Y.
登録日2014-04-08
公開日2015-03-11
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Crystal structure of the ubiquitin-like domain-CUT repeat-like tandem of special AT-rich sequence binding protein 1 (SATB1) reveals a coordinating DNA-binding mechanism.
J.Biol.Chem., 289, 2014
1K8L
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BU of 1k8l by Molmil
XBY6: An analog of CK14 containing 6 dithiophosphate groups
分子名称: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
著者Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
登録日2001-10-24
公開日2003-04-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
1K8J
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BU of 1k8j by Molmil
NMR STRUCTURE OF THE CK14 DNA DUPLEX: A PORTION OF THE KNOWN NF-kB SEQUENCE CK1
分子名称: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
著者Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
登録日2001-10-24
公開日2003-04-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
1K8N
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BU of 1k8n by Molmil
NMR structure of the XBY2 DNA duplex, an analog of CK14 containing phosphorodithioate groups at C22 and C24
分子名称: FIRST STRAND OF CK14 DNA DUPLEX, SECOND STRAND OF CK14 DNA DUPLEX
著者Volk, D.E, Yang, X, Fennewald, S.M, King, D.J, Bassett, S.E, Venkitachalam, S, Herzog, N, Luxon, B.A, Gorenstein, D.G.
登録日2001-10-24
公開日2003-04-15
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and design of dithiophosphate backbone aptamers targeting transcription factor NF-kappaB
Bioorg.Chem., 30, 2002
5Z0R
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BU of 5z0r by Molmil
Structural insight into the Zika virus capsid encapsulating the viral genome
分子名称: Extracellular solute-binding protein family 1,viral genome protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, T, Zhao, Q, Yang, X, Chen, C, Yang, K, Wu, C, Zhang, T, Duan, Y, Xue, X, Mi, K, Ji, X, Wang, Z, Yang, H.
登録日2017-12-20
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural insight into the Zika virus capsid encapsulating the viral genome.
Cell Res., 28, 2018
5Z0V
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BU of 5z0v by Molmil
Structural insight into the Zika virus capsid encapsulating the viral genome
分子名称: Extracellular solute-binding protein family 1,viral genome protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Li, T, Zhao, Q, Yang, X, Chen, C, Yang, K, Wu, C, Zhang, T, Duan, Y, Xue, X, Mi, K, Ji, X, Wang, Z, Yang, H.
登録日2017-12-21
公開日2018-04-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.913 Å)
主引用文献Structural insight into the Zika virus capsid encapsulating the viral genome.
Cell Res., 28, 2018
7F01
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BU of 7f01 by Molmil
Structure of a triple-helix region of human collagen type XVII
分子名称: SULFATE ION, collagen type XVII
著者Zhu, Y, Yang, X, Sun, F.
登録日2021-06-03
公開日2022-06-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structure of a triple-helix region of human collagen type XVII
To Be Published
5B6G
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BU of 5b6g by Molmil
Protein-protein interaction
分子名称: Adenomatous polyposis coli protein, GLYCEROL, PHQ-ALA-GLY-GLU-ALA-XYC-TYR-GLU, ...
著者Zhao, Y, Jiang, H, Yang, X, Jiang, F, Song, K, Zhang, J.
登録日2016-05-27
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Peptidomimetic inhibitors of APC-Asef interaction block colorectal cancer migration.
Nat. Chem. Biol., 13, 2017
9II2
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BU of 9ii2 by Molmil
Cryo-EM Structure of the 2:2 Complex of mGlu3 and beta-arrestin1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-arrestin-1, CHOLESTEROL, ...
著者Wen, T.L, Du, M, Yang, X, Shen, Y.Q.
登録日2024-06-18
公開日2025-03-05
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular basis of beta-arrestin coupling to the metabotropic glutamate receptor mGlu3.
Nat.Chem.Biol., 2025
9II3
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BU of 9ii3 by Molmil
Cryo-EM Structure of the 2:1 Complex of mGlu3 and beta-arrestin1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-arrestin-1, CHOLESTEROL, ...
著者Wen, T.L, Du, M, Yang, X, Shen, Y.Q.
登録日2024-06-19
公開日2025-03-05
最終更新日2025-03-19
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular basis of beta-arrestin coupling to the metabotropic glutamate receptor mGlu3.
Nat.Chem.Biol., 2025
1NBS
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BU of 1nbs by Molmil
Crystal structure of the specificity domain of Ribonuclease P RNA
分子名称: LEAD (II) ION, MAGNESIUM ION, RIBONUCLEASE P RNA
著者Krasilnikov, A.S, Yang, X, Pan, T, Mondragon, A.
登録日2002-12-03
公開日2003-02-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Crystal structure of the specificity domain of Ribonuclease P
Nature, 421, 2003
5IWZ
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BU of 5iwz by Molmil
Synaptonemal complex protein
分子名称: Synaptonemal complex protein 2
著者Feng, J, Fu, S, Cao, X, Wu, H, Lu, J, Zeng, M, Liu, L, Yang, X, Shen, Y.
登録日2016-03-23
公開日2017-03-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献Structure of synaptonemal complexes protein at 2.6 angstroms resolution
To Be Published
3TUO
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BU of 3tuo by Molmil
Crystal structure of N-terminal domain of DNA-binding protein satb1
分子名称: DNA-binding protein SATB1
著者Wang, Z, Yang, X, Long, J, Shen, Y.
登録日2011-09-17
公開日2012-02-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献The structural basis for the oligomerization of the N-terminal domain of SATB1
Nucleic Acids Res., 40, 2012
8DQL
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BU of 8dql by Molmil
CryoEM structure of IglD
分子名称: Secretion system protein
著者Liu, X, Clemens, D, Lee, B, Yang, X, Zhou, H, Horwitz, M.
登録日2022-07-19
公開日2022-08-17
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Atomic Structure of IglD Demonstrates Its Role as a Component of the Baseplate Complex of the Francisella Type VI Secretion System.
Mbio, 13, 2022
4ROU
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BU of 4rou by Molmil
Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
分子名称: CHLORIDE ION, Mitochondrial ribonuclease P protein 3, ZINC ION
著者Li, F, Liu, X, Yang, X, Shen, Y.
登録日2014-10-29
公開日2015-11-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.713 Å)
主引用文献Auto-inhibition Mechanism of Human Mitochondrial RNase P Protein Complex
TO BE PUBLISHED
7Y7J
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BU of 7y7j by Molmil
SARS-CoV-2 S trimer in complex with 1F Fab
分子名称: 1F VH, 1F VL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhao, S, Liu, F, Yang, X, Zhong, G.
登録日2022-06-22
公開日2023-02-22
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A core epitope targeting antibody of SARS-CoV-2.
Protein Cell, 14, 2023
7Y7K
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BU of 7y7k by Molmil
SARS-CoV-2 RBD in complex with 1F Fab
分子名称: 1F VH, 1F VL, Spike protein S1
著者Zhao, S, Liu, F, Yang, X, Zhong, G.
登録日2022-06-22
公開日2023-02-22
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献A core epitope targeting antibody of SARS-CoV-2.
Protein Cell, 14, 2023
5IZ8
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BU of 5iz8 by Molmil
Protein-protein interaction
分子名称: ACE-ALA-GLY-GLU-ALA-LEU-ALA-ASP-NH2, Adenomatous polyposis coli protein, TRIETHYLENE GLYCOL
著者Zhao, Y, Jiang, H, Yang, X, Jiang, F, Song, K, Zhang, J.
登録日2016-03-25
公開日2017-07-05
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Peptidomimetic inhibitors of APC-Asef interaction block colorectal cancer migration.
Nat. Chem. Biol., 13, 2017
6LPI
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BU of 6lpi by Molmil
Crystal Structure of AHAS holo-enzyme
分子名称: Acetolactate synthase isozyme 1 large subunit, Acetolactate synthase isozyme 1 small subunit, FLAVIN-ADENINE DINUCLEOTIDE, ...
著者Zhang, Y, Yang, X, Xi, Z, Shen, Y.
登録日2020-01-10
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.849 Å)
主引用文献Molecular architecture of the acetohydroxyacid synthase holoenzyme.
Biochem.J., 477, 2020
8HPM
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BU of 8hpm by Molmil
LpqY-SugABC in state 2
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.82 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPN
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BU of 8hpn by Molmil
LpqY-SugABC in state 3
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.55 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPS
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BU of 8hps by Molmil
LpqY-SugABC in state 5
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPL
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BU of 8hpl by Molmil
LpqY-SugABC in state 1
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.29 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023
8HPR
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BU of 8hpr by Molmil
LpqY-SugABC in state 4
分子名称: ABC sugar transporter, permease component, ABC transporter, ...
著者Liang, J, Yang, X, Zhang, B, Rao, Z, Liu, F.
登録日2022-12-12
公開日2023-09-06
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.75 Å)
主引用文献Structural insights into trehalose capture and translocation by mycobacterial LpqY-SugABC.
Structure, 31, 2023

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