Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7MJW
DownloadVisualize
BU of 7mjw by Molmil
Methylated MiaB in the complex with 5'-deoxyadenosine, methionine and RNA
分子名称: 5'-DEOXYADENOSINE, FE3-S4 methylated cluster, IRON/SULFUR CLUSTER, ...
著者Esakova, O.A, Grove, T.L, Yennawar, N.H, Arcinas, A.J, Wang, B, Krebs, C, Almo, S.C, Booker, S.J.
登録日2021-04-20
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural basis for tRNA methylthiolation by the radical SAM enzyme MiaB.
Nature, 597, 2021
7MJX
DownloadVisualize
BU of 7mjx by Molmil
MiaB in the complex with 5'-deoxyadenosine, methionine and RNA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-DEOXYADENOSINE, FE3-S4 CLUSTER, ...
著者Esakova, O.A, Grove, T.L, Yennawar, N.H, Arcinas, A.J, Wang, B, Krebs, C, Almo, S.C, Booker, S.J.
登録日2021-04-20
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis for tRNA methylthiolation by the radical SAM enzyme MiaB.
Nature, 597, 2021
7M1S
DownloadVisualize
BU of 7m1s by Molmil
Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
分子名称: Guanylate-binding protein 2, PHOSPHATE ION
著者Roy, S, Wang, B, Tian, Y, Yin, Q.
登録日2021-03-15
公開日2022-04-27
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure of human guanylate-binding protein 2 (hGBP2) K51A mutant
To Be Published
6J4E
DownloadVisualize
BU of 6j4e by Molmil
Crystal structure of the AtWRKY1 domain
分子名称: DNA (5'-D(*AP*GP*CP*CP*TP*TP*TP*GP*AP*CP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*TP*GP*GP*TP*CP*AP*AP*AP*GP*GP*C)-3'), WRKY transcription factor 1, ...
著者Xu, Y.P, Xu, H, Wang, B, Su, X.D.
登録日2019-01-08
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.126 Å)
主引用文献Crystal structure of the AtWRKY1 domain
To Be Published
4HY1
DownloadVisualize
BU of 4hy1 by Molmil
Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
分子名称: 6-({4-[(3R)-3-aminopyrrolidin-1-yl]-5-chloro-6-ethyl-7H-pyrrolo[2,3-d]pyrimidin-2-yl}sulfanyl)-1H-isoindol-1-one, Topoisomerase IV, subunit B
著者Bensen, D.C, Creighton, C.J, Kwan, B, Tari, L.W.
登録日2012-11-12
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pyrrolopyrimidine inhibitors of DNA gyrase B (GyrB) and topoisomerase IV (ParE). Part I: Structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
Bioorg.Med.Chem.Lett., 23, 2013
4HXZ
DownloadVisualize
BU of 4hxz by Molmil
Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
分子名称: 6-ethyl-4-methoxy-2-(pyridin-3-ylsulfanyl)-7H-pyrrolo[2,3-d]pyrimidine-5-carbaldehyde, Topoisomerase IV, subunit B
著者Bensen, D.C, Creighton, C.J, Kwan, B, Tari, L.W.
登録日2012-11-12
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Pyrrolopyrimidine inhibitors of DNA gyrase B (GyrB) and topoisomerase IV (ParE). Part I: Structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
Bioorg.Med.Chem.Lett., 23, 2013
4O63
DownloadVisualize
BU of 4o63 by Molmil
Co-enzyme Induced Conformational Changes in Bovine Eye Glyceraldehyde 3-Phosphate Dehydrogenase
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Baker, B.Y, Shi, W, Wang, B, Palczewski, K.
登録日2013-12-20
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献High-resolution crystal structures of the photoreceptor glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with three and four-bound NAD molecules.
Protein Sci., 23, 2014
4HYM
DownloadVisualize
BU of 4hym by Molmil
Pyrrolopyrimidine inhibitors of dna gyrase b and topoisomerase iv, part i: structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
分子名称: 7-({4-[(3R)-3-aminopyrrolidin-1-yl]-5-chloro-6-ethyl-7H-pyrrolo[2,3-d]pyrimidin-2-yl}sulfanyl)pyrido[2,3-b]pyrazin-2(1H)-one, Topoisomerase IV, subunit B
著者Bensen, D.C, Creighton, C.J, Kwan, B, Tari, L.W.
登録日2012-11-13
公開日2013-02-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pyrrolopyrimidine inhibitors of DNA gyrase B (GyrB) and topoisomerase IV (ParE). Part I: Structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
Bioorg.Med.Chem.Lett., 23, 2013
7JTI
DownloadVisualize
BU of 7jti by Molmil
Interphotoreceptor retinoid-binding protein (IRBP) in complex with a monoclonal antibody (F3F5 mAb5)
分子名称: Retinol-binding protein 3, mAb5 Fab heavy chain, mAb5 Fab light chain
著者Sears, A.E, Albiez, S, Gulati, S, Wang, B, Kiser, P, Kovacik, L, Engel, A, Stahlberg, H, Palczewski, K.
登録日2020-08-17
公開日2020-10-07
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (7.4 Å)
主引用文献Single particle cryo-EM of the complex between interphotoreceptor retinoid-binding protein and a monoclonal antibody.
Faseb J., 34, 2020
4O59
DownloadVisualize
BU of 4o59 by Molmil
Co-enzyme Induced Conformational Changes in Bovine Eye Glyceraldehyde 3-Phosphate Dehydrogenase
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Baker, B.Y, Shi, W, Wang, B, Palczewski, K.
登録日2013-12-19
公開日2014-09-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献High-resolution crystal structures of the photoreceptor glyceraldehyde 3-phosphate dehydrogenase (GAPDH) with three and four-bound NAD molecules.
Protein Sci., 23, 2014
7EJZ
DownloadVisualize
BU of 7ejz by Molmil
Complex Structure of antibody BD-503 and RBD-S477N of COVID-19
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of BD-503, Light Chain of BD-503, ...
著者Xu, H, Wang, B, Zhao, T.N, Su, X.D.
登録日2021-04-03
公開日2022-04-13
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3.63 Å)
主引用文献Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants.
Cell Res., 31, 2021
7EK0
DownloadVisualize
BU of 7ek0 by Molmil
Complex Structure of antibody BD-503 and RBD-N501Y of COVID-19
分子名称: Heavy Chain of BD-503, Light Chain of BD-503, Spike protein S1
著者Xu, H, Wang, B, Zhao, T.N, Su, X.D.
登録日2021-04-03
公開日2022-04-13
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants.
Cell Res., 31, 2021
7EJY
DownloadVisualize
BU of 7ejy by Molmil
Complex Structure of antibody BD-503 and RBD of COVID-19
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of BD-503, Light Chain of BD-503, ...
著者Xu, H, Wang, B, Zhao, T.N, Su, X.D.
登録日2021-04-03
公開日2022-04-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants.
Cell Res., 31, 2021
7F6Z
DownloadVisualize
BU of 7f6z by Molmil
Complex Structure of antibody BD-503 and RBD-501Y.V2 of COVID-19
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of BD-503, Light Chain of BD-503, ...
著者Xu, H, Wang, B, Zhao, T.N, Su, X.D.
登録日2021-06-26
公開日2022-06-29
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants.
Cell Res., 31, 2021
7F6Y
DownloadVisualize
BU of 7f6y by Molmil
Complex Structure of antibody BD-503 and RBD-E484K of COVID-19
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of BD-503, Light Chain of BD-503, ...
著者Xu, H, Wang, B, Zhao, T.N, Su, X.D.
登録日2021-06-26
公開日2022-06-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-based analyses of neutralization antibodies interacting with naturally occurring SARS-CoV-2 RBD variants.
Cell Res., 31, 2021
2KSO
DownloadVisualize
BU of 2kso by Molmil
EphA2:SHIP2 SAM:SAM complex
分子名称: Ephrin type-A receptor 2, Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2
著者Hota, P.K, Preeti, C, Stetzik, L, Kim, S, Wang, B, Lee, H, Buck, M.
登録日2010-01-10
公開日2011-07-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure and function of the EphA2:SHIP2 SAM domain heterodimer
To be Published
7E7M
DownloadVisualize
BU of 7e7m by Molmil
Crystal Structure Analysis of the Streptococcus agalactiae Ribose Binding Protein RbsB
分子名称: D-ribose ABC transporter substrate-binding protein, beta-D-ribopyranose
著者Pan, L.X, Wang, B, Yang, L.Y, Yang, D.F.
登録日2021-02-26
公開日2022-03-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal Structure Analysis of the Streptococcus agalactiae Ribose Binding Protein RbsB
To be published
7EJH
DownloadVisualize
BU of 7ejh by Molmil
Crystal structure of KRED mutant-F147L/L153Q/Y190P/L199A/M205F/M206F and 2-hydroxyisoindoline-1,3-dione complex
分子名称: 2-oxidanylisoindole-1,3-dione, 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase, MAGNESIUM ION, ...
著者Cui, J, Huang, X, Wang, B, Zhao, H, Zhou, J.
登録日2021-04-02
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.72883928 Å)
主引用文献Photoinduced chemomimetic biocatalysis for enantioselective intermolecular radical conjugate addition
Nat Catal, 2022
7EJJ
DownloadVisualize
BU of 7ejj by Molmil
Crystal structure of KRED F147L/L153Q/Y190P variant and methyl methacrylate complex
分子名称: 3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase, MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Cui, J, Huang, X, Wang, B, Zhao, H, Zhou, J.
登録日2021-04-02
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.80000663 Å)
主引用文献Photoinduced chemomimetic biocatalysis for enantioselective intermolecular radical conjugate addition
Nat Catal, 2022
7EJI
DownloadVisualize
BU of 7eji by Molmil
Crystal structure of KRED F147L/L153Q/Y190P/L199A/M205F/M206F variant and methyl methacrylate complex
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-oxidanylisoindole-1,3-dione, ...
著者Cui, J, Huang, X, Wang, B, Zhao, H, Zhou, J.
登録日2021-04-02
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.560016 Å)
主引用文献Photoinduced chemomimetic biocatalysis for enantioselective intermolecular radical conjugate addition
Nat Catal, 2022
7W06
DownloadVisualize
BU of 7w06 by Molmil
Itaconate inducible LysR-Type Transcriptional regulator (ITCR) in complex with itaconate (SeMet labeled), Space group C121.
分子名称: 2-methylidenebutanedioic acid, CHLORIDE ION, SULFATE ION, ...
著者Sun, P.K, Wang, B, Wang, Z.X, Qi, S, Li, X.J.
登録日2021-11-17
公開日2022-10-26
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A genetically encoded fluorescent biosensor for detecting itaconate with subcellular resolution in living macrophages.
Nat Commun, 13, 2022
7VP2
DownloadVisualize
BU of 7vp2 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP4
DownloadVisualize
BU of 7vp4 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*TP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.04 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP1
DownloadVisualize
BU of 7vp1 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(*AP*TP*GP*TP*GP*GP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*GP*AP*CP*CP*AP*CP*A)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published
7VP7
DownloadVisualize
BU of 7vp7 by Molmil
Structure of a transcription factor and DNA complex
分子名称: DNA (5'-D(P*AP*GP*GP*CP*CP*CP*CP*CP*CP*CP*AP*T)-3'), Transcription factor TCP10
著者Zhang, Y, Xu, Y.P, Wang, B, Su, X.D.
登録日2021-10-15
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.653 Å)
主引用文献Structural basis for DNA recognition by TCP transcription factors
To Be Published

236963

件を2025-06-04に公開中

PDB statisticsPDBj update infoContact PDBjnumon