Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6X2X
DownloadVisualize
BU of 6x2x by Molmil
Crystal Structure of Mek1NES peptide bound to CRM1(E571K)
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, Exportin-1, GLYCEROL, ...
著者Baumhardt, J.M.
登録日2020-05-21
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.458 Å)
主引用文献Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020
6X2Y
DownloadVisualize
BU of 6x2y by Molmil
Crystal Structure of mDia2NES peptide bound to CRM1(E571K)
分子名称: 1,2-ETHANEDIOL, Exportin-1, GLYCEROL, ...
著者Baumhardt, J.M.
登録日2020-05-21
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020
6X2R
DownloadVisualize
BU of 6x2r by Molmil
Crystal Structure of the 4E-TNES peptide bound to CRM1
分子名称: Eukaryotic translation initiation factor 4E transporter, Exportin-1, GLYCEROL, ...
著者Baumhardt, J.M.
登録日2020-05-20
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Recognition of nuclear export signals by CRM1 carrying the oncogenic E571K mutation.
Mol.Biol.Cell, 31, 2020
6DEJ
DownloadVisualize
BU of 6dej by Molmil
The structure of HcRed7, a brighter and red-shifted HcRed variant
分子名称: CHLORIDE ION, DODECAETHYLENE GLYCOL, GFP-like non-fluorescent chromoprotein, ...
著者Wannier, T.M, Mayo, S.L.
登録日2018-05-12
公開日2018-05-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6279 Å)
主引用文献Monomerization of far-red fluorescent proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3AM6
DownloadVisualize
BU of 3am6 by Molmil
Crystal structure of the proton pumping rhodopsin AR2 from marine alga Acetabularia acetabulum
分子名称: CHOLESTEROL, RETINAL, rhodopsin-2
著者Wada, T, Yokoyama, S.
登録日2010-08-16
公開日2011-07-06
最終更新日2011-12-07
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal structure of the eukaryotic light-driven proton-pumping rhodopsin, Acetabularia rhodopsin II, from marine alga
J.Mol.Biol., 411, 2011
1OBR
DownloadVisualize
BU of 1obr by Molmil
CARBOXYPEPTIDASE T
分子名称: CALCIUM ION, CARBOXYPEPTIDASE T, SULFATE ION, ...
著者Teplyakov, A, Polyakov, K, Obmolova, G, Osterman, A.
登録日1996-06-22
公開日1997-01-11
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of carboxypeptidase T from Thermoactinomyces vulgaris.
Eur.J.Biochem., 208, 1992
4YHX
DownloadVisualize
BU of 4yhx by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-GpeMI Bound to Uncleaved DNA
分子名称: CALCIUM ION, DNA (27-MER), Ribosomal protein 3/homing endonuclease-like fusion protein
著者Hallinan, J.P, Kaiser, B.K, Stoddard, B.L.
登録日2015-02-27
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4Z20
DownloadVisualize
BU of 4z20 by Molmil
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTGT Central Four
分子名称: CALCIUM ION, DNA (26-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-27
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
4Z1Z
DownloadVisualize
BU of 4z1z by Molmil
Crystal Structure of Meganuclease I-SmaMI Bound to Uncleaveable DNA with a TTCT Central Four
分子名称: CALCIUM ION, DNA (28-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-03-27
公開日2016-03-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
7XAR
DownloadVisualize
BU of 7xar by Molmil
Crystal structure of 3C-like protease from SARS-CoV-2 in complex with covalent inhibitor
分子名称: 3C-like proteinase, 4-fluoranyl-~{N}-[(2~{S})-1-[2-(2-fluoranylethanoyl)-2-[[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]methyl]hydrazinyl]-4-methyl-1-oxidanylidene-pentan-2-yl]-1~{H}-indole-2-carboxamide, CHLORIDE ION, ...
著者Caaveiro, J.M.M, Ochi, J, Takahashi, D, Ueda, T, Ojida, A.
登録日2022-03-18
公開日2022-11-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of Chlorofluoroacetamide-Based Covalent Inhibitors for Severe Acute Respiratory Syndrome Coronavirus 2 3CL Protease.
J.Med.Chem., 65, 2022
3VA2
DownloadVisualize
BU of 3va2 by Molmil
Crystal structure of human Interleukin-5 in complex with its alpha receptor
分子名称: Interleukin-5, Interleukin-5 receptor subunit alpha
著者Kusano, S, Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S.
登録日2011-12-28
公開日2012-07-25
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural basis of interleukin-5 dimer recognition by its alpha receptor
Protein Sci., 21, 2012
6FF3
DownloadVisualize
BU of 6ff3 by Molmil
Crystal structure of Drosophila neural ectodermal development factor Imp-L1 with Human IGF-I
分子名称: Insulin-like growth factor I, Neural/ectodermal development factor IMP-L2
著者Brzozowski, A.M, Kulahin, N, Kristensen, O, Schluckebier, G, Meyts, P.D, Viola, C.M.
登録日2018-01-03
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Structures of insect Imp-L2 suggest an alternative strategy for regulating the bioavailability of insulin-like hormones.
Nat Commun, 9, 2018
6FEY
DownloadVisualize
BU of 6fey by Molmil
Crystal structure of Drosophila neural ectodermal development factor Imp-L2 with Drosophila DILP5 insulin
分子名称: Neural/ectodermal development factor IMP-L2, Probable insulin-like peptide 5
著者Brzozowski, A.M, Kulahin, N, Kristensen, O, Schluckebier, G, Meyts, P.D.
登録日2018-01-03
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.48 Å)
主引用文献Structures of insect Imp-L2 suggest an alternative strategy for regulating the bioavailability of insulin-like hormones.
Nat Commun, 9, 2018
3AOI
DownloadVisualize
BU of 3aoi by Molmil
RNA polymerase-Gfh1 complex (Crystal type 2)
分子名称: Anti-cleavage anti-GreA transcription factor Gfh1, DNA (5'-D(*GP*GP*TP*CP*TP*GP*TP*AP*TP*CP*AP*CP*GP*AP*GP*CP*CP*A*CP*CP*GP*CP*CP*GP*CP*AP*T)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Tagami, S, Sekine, S, Kumarevel, T, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-09-30
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein
Nature, 468, 2010
3AQA
DownloadVisualize
BU of 3aqa by Molmil
Crystal structure of the human BRD2 BD1 bromodomain in complex with a BRD2-interactive compound, BIC1
分子名称: 1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
著者Umehara, T, Nakamura, Y, Terada, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-10-27
公開日2011-05-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Real-Time Imaging of Histone H4K12-Specific Acetylation Determines the Modes of Action of Histone Deacetylase and Bromodomain Inhibitors
Chem.Biol., 18, 2011
3AOH
DownloadVisualize
BU of 3aoh by Molmil
RNA polymerase-Gfh1 complex (Crystal type 1)
分子名称: Anti-cleavage anti-GreA transcription factor Gfh1, DNA (5'-D(*GP*GP*TP*CP*TP*GP*TP*AP*TP*CP*AP*CP*GP*AP*GP*CP*CP*AP*CP*CP*GP*CP*CP*GP*CP*AP*T)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Tagami, S, Sekine, S, Kumarevel, T, Yamamoto, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-09-28
公開日2010-12-08
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (4.1 Å)
主引用文献Crystal structure of bacterial RNA polymerase bound with a transcription inhibitor protein
Nature, 468, 2010
2D3H
DownloadVisualize
BU of 2d3h by Molmil
Crystal structures of collagen model peptides (Pro-Pro-Gly)4-Hyp-Hyp-Gly-(Pro-Pro-Gly)4
分子名称: COLLAGEN MODEL PEPTIDES (PRO-PRO-GLY)4-HYP-HYP-GLY-(PRO-PRO-GLY)4
著者Wu, G, Noguchi, K, Okuyama, K, Mizuno, K, Bachinger, H.P.
登録日2005-09-28
公開日2006-09-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献High-resolution structures of collagen-like peptides [(Pro-Pro-Gly)(4)-Xaa-Yaa-Gly-(Pro-Pro-Gly)(4)]: Implications for triple-helix hydration and Hyp(X) puckering.
Biopolymers, 91, 2009
8JBO
DownloadVisualize
BU of 8jbo by Molmil
Crystal structure of TxGH116 from Thermoanaerobacterium xylanolyticum with isofagomine
分子名称: 1,2-ETHANEDIOL, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, CALCIUM ION, ...
著者Pengthaisong, S, Ketudat Cairns, J.R.
登録日2023-05-09
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for inhibition of a GH116 beta-glucosidase and its missense mutants by GBA2 inhibitors: Crystallographic and quantum chemical study.
Chem.Biol.Interact., 384, 2023
5ESP
DownloadVisualize
BU of 5esp by Molmil
Crystal Structure of LAGLIDADG Meganuclease I-PanMI with coordinated Calcium ions
分子名称: CALCIUM ION, DNA (27-MER), GLYCEROL, ...
著者Hallinan, J.P, Stoddard, B.L.
登録日2015-11-16
公開日2016-03-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.995 Å)
主引用文献Indirect DNA Sequence Recognition and Its Impact on Nuclease Cleavage Activity.
Structure, 24, 2016
1TRA
DownloadVisualize
BU of 1tra by Molmil
RESTRAINED REFINEMENT OF THE MONOCLINIC FORM OF YEAST PHENYLALANINE TRANSFER RNA. TEMPERATURE FACTORS AND DYNAMICS, COORDINATED WATERS, AND BASE-PAIR PROPELLER TWIST ANGLES
分子名称: MAGNESIUM ION, TRNAPHE
著者Westhof, E, Sundaralingam, M.
登録日1986-05-16
公開日1986-07-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Restrained refinement of the monoclinic form of yeast phenylalanine transfer RNA. Temperature factors and dynamics, coordinated waters, and base-pair propeller twist angles.
Biochemistry, 25, 1986
1TYK
DownloadVisualize
BU of 1tyk by Molmil
SOLUTION STRUCTURE OF A TOXIN FROM THE TARANTULA, GRAMMOSTOLA SPATULATA, WHICH INHIBITS MECHANOSENSITIVE ION CHANNELS
分子名称: Toxin GsMTx-4
著者Oswald, R.E, Suchyna, T.M, Mcfeeters, R, Gottlieb, P, Sachs, F.
登録日2004-07-08
公開日2004-07-13
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution Structure of Peptide Toxins that Block Mechanosensitive Ion Channels
J.Biol.Chem., 277, 2002
4GCL
DownloadVisualize
BU of 4gcl by Molmil
structure of no-dna factor
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*T)-3'), Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-07-30
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
4GCT
DownloadVisualize
BU of 4gct by Molmil
structure of No factor protein-DNA complex
分子名称: DNA (5'-D(*TP*TP*AP*CP*GP*TP*GP*AP*GP*TP*AP*CP*TP*CP*AP*CP*GP*TP*AP*A)-3'), Nucleoid occlusion factor SlmA
著者Schumacher, M.A.
登録日2012-07-30
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献SlmA forms a higher-order structure on DNA that inhibits cytokinetic Z-ring formation over the nucleoid.
Proc.Natl.Acad.Sci.USA, 110, 2013
6ABK
DownloadVisualize
BU of 6abk by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with TeocLys
分子名称: (2S)-2-azanyl-6-(trimethylsilylmethoxycarbonylamino)hexanoic acid, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Yanagisawa, T, Kuratani, M, Yokoyama, S.
登録日2018-07-22
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019
6AAO
DownloadVisualize
BU of 6aao by Molmil
Crystal structure of Methanosarcina mazei PylRS(Y306A/Y384F) complexed with TCO*Lys
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Yanagisawa, T, Kuratani, M, Yokoyama, S.
登録日2018-07-18
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.403 Å)
主引用文献Structural Basis for Genetic-Code Expansion with Bulky Lysine Derivatives by an Engineered Pyrrolysyl-tRNA Synthetase.
Cell Chem Biol, 26, 2019

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon