2RNF
| X-RAY CRYSTAL STRUCTURE OF HUMAN RIBONUCLEASE 4 IN COMPLEX WITH D(UP) | 分子名称: | 2'-DEOXYURIDINE 3'-MONOPHOSPHATE, RIBONUCLEASE 4 | 著者 | Terzyan, S.S, Peracaula, R, De Llorens, R, Tsushima, Y, Yamada, H, Seno, M, Gomis-Ruth, F.X, Coll, M. | 登録日 | 1998-11-03 | 公開日 | 1999-11-10 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | The three-dimensional structure of human RNase 4, unliganded and complexed with d(Up), reveals the basis for its uridine selectivity. J.Mol.Biol., 285, 1999
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2RUK
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8H8Q
| Fab-amyloid beta fragment complex at neutral pH | 分子名称: | CHLORIDE ION, Fab, GLN-LYS-CYS-VAL-PHE-PHE-ALA-GLU-ASP-VAL-GLY-SER-ASN-CYS-GLY, ... | 著者 | Kita, A, Irie, K, Irie, Y, Matsushima, Y, Miki, K. | 登録日 | 2022-10-24 | 公開日 | 2023-10-25 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Fab-amyloid beta fragment complex at neutral pH To Be Published
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2RO0
| Solution structure of the knotted tudor domain of the yeast histone acetyltransferase, Esa1 | 分子名称: | Histone acetyltransferase ESA1 | 著者 | Shimojo, H, Sano, N, Moriwaki, Y, Okuda, M, Horikoshi, M, Nishimura, Y. | 登録日 | 2008-03-01 | 公開日 | 2008-04-29 | 最終更新日 | 2024-05-29 | 実験手法 | SOLUTION NMR | 主引用文献 | Novel structural and functional mode of a knot essential for RNA binding activity of the Esa1 presumed chromodomain J.Mol.Biol., 378, 2008
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5ZV2
| FGFR-1 in complex with ligand lenvatinib | 分子名称: | 4-{3-chloro-4-[(cyclopropylcarbamoyl)amino]phenoxy}-7-methoxyquinoline-6-carboxamide, Fibroblast growth factor receptor 1 | 著者 | Matsuki, M, Hoshi, T, Yamamoto, Y, Ikemori-Kawada, M, Minoshima, Y, Funahashi, Y, Matsui, J. | 登録日 | 2018-05-09 | 公開日 | 2018-07-11 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.86 Å) | 主引用文献 | Lenvatinib inhibits angiogenesis and tumor fibroblast growth factor signaling pathways in human hepatocellular carcinoma models. Cancer Med, 7, 2018
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1IWI
| Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Cytochrome P450cam | 分子名称: | CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-05-15 | 公開日 | 2002-06-05 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam Biochemistry, 42, 2003
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1JF5
| CRYSTAL STRUCTURE OF THERMOACTINOMYCES VULGARIS R-47 ALPHA-AMYLASE 2 MUTANT F286A | 分子名称: | ALPHA AMYLASE II, CALCIUM ION | 著者 | Ohtaki, A, Kondo, S, Shimura, Y, Tonozuka, T, Sakano, Y, Kamitori, S. | 登録日 | 2001-06-20 | 公開日 | 2002-05-22 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Role of Phe286 in the recognition mechanism of cyclomaltooligosaccharides (cyclodextrins) by Thermoactinomyces vulgaris R-47 alpha-amylase 2 (TVAII). X-ray structures of the mutant TVAIIs, F286A and F286Y, and kinetic analyses of the Phe286-replaced mutant TVAIIs CARBOHYDR.RES., 334, 2001
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1JIB
| Complex of Alpha-amylase II (TVA II) from Thermoactinomyces vulgaris R-47 with Maltotetraose Based on a Crystal Soaked with Maltohexaose. | 分子名称: | NEOPULLULANASE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | 著者 | Yokota, T, Tonozuka, T, Shimura, Y, Ichikawa, K, Kamitori, S, Sakano, Y. | 登録日 | 2001-07-02 | 公開日 | 2001-07-25 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (3.3 Å) | 主引用文献 | Structures of Thermoactinomyces vulgaris R-47 alpha-amylase II complexed with substrate analogues. Biosci.Biotechnol.Biochem., 65, 2001
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1GEB
| X-RAY CRYSTAL STRUCTURE AND CATALYTIC PROPERTIES OF THR252ILE MUTANT OF CYTOCHROME P450CAM | 分子名称: | CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE | 著者 | Hishiki, T, Shimada, H, Nagano, S, Park, S.-Y, Ishimura, Y. | 登録日 | 2000-11-01 | 公開日 | 2000-11-15 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.03 Å) | 主引用文献 | X-ray crystal structure and catalytic properties of Thr252Ile mutant of cytochrome P450cam: roles of Thr252 and water in the active center. J.Biochem., 128, 2000
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1AB9
| CRYSTAL STRUCTURE OF BOVINE GAMMA-CHYMOTRYPSIN | 分子名称: | GAMMA-CHYMOTRYPSIN, PENTAPEPTIDE (TPGVY), SULFATE ION | 著者 | Sugio, S, Kashima, A, Inoue, Y, Maeda, I, Nose, T, Shimohigashi, Y. | 登録日 | 1997-02-05 | 公開日 | 1997-08-20 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | X-ray crystal structure of a dipeptide-chymotrypsin complex in an inhibitory interaction. Eur.J.Biochem., 255, 1998
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1AFQ
| CRYSTAL STRUCTURE OF BOVINE GAMMA-CHYMOTRYPSIN COMPLEXED WITH A SYNTHETIC INHIBITOR | 分子名称: | BOVINE GAMMA-CHYMOTRYPSIN, D-leucyl-N-(4-fluorobenzyl)-L-phenylalaninamide, SULFATE ION | 著者 | Sugio, S, Kashima, A, Inoue, Y, Maeda, I, Nose, T, Shimohigashi, Y. | 登録日 | 1997-03-12 | 公開日 | 1997-09-17 | 最終更新日 | 2023-08-02 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | X-ray crystal structure of a dipeptide-chymotrypsin complex in an inhibitory interaction. Eur.J.Biochem., 255, 1998
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1ITY
| Solution structure of the DNA binding domain of human TRF1 | 分子名称: | TRF1 | 著者 | Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2002-02-15 | 公開日 | 2002-03-06 | 最終更新日 | 2023-12-27 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of a telomeric DNA complex of human TRF1 Structure, 9, 2001
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1IR7
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1IR9
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1J05
| The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment | 分子名称: | GLYCEROL, PHOSPHATE ION, anti-CEA mAb T84.66, ... | 著者 | Kondo, H, Nishimura, Y, Shiroishi, M, Asano, R, Noro, N, Tsumoto, K, Kumagai, I. | 登録日 | 2002-11-01 | 公開日 | 2003-12-16 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | 主引用文献 | The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment To be Published
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1EWT
| CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 LIGAND FREE FORM I | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1, SULFATE ION | 著者 | Kunishima, N, Shimada, Y, Tsuji, Y, Jingami, H, Morikawa, K. | 登録日 | 2000-04-27 | 公開日 | 2000-12-18 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (3.7 Å) | 主引用文献 | Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor. Nature, 407, 2000
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6ZBO
| HIF Prolyl Hydroxylase 2 (PHD2/EGLN1) in Complex with 1-(6-morpholinopyrimidin-4-yl)-4-(1H-1,2,3-triazol-1-yl)-1H-pyrazol-5-ol (Molidustat) | 分子名称: | 2-(6-morpholin-4-ylpyrimidin-4-yl)-4-(1,2,3-triazol-1-yl)pyrazol-3-ol, CHLORIDE ION, Egl nine homolog 1, ... | 著者 | Figg Jr, W.D, McDonough, M.A, Nakashima, Y, Holt-Martyn, J.P, Schofield, C.J. | 登録日 | 2020-06-08 | 公開日 | 2021-04-07 | 最終更新日 | 2024-01-24 | 実験手法 | X-RAY DIFFRACTION (1.79 Å) | 主引用文献 | Structural Basis of Prolyl Hydroxylase Domain Inhibition by Molidustat. Chemmedchem, 16, 2021
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6ZBN
| HIF Prolyl Hydroxylase 2 (PHD2/EGLN1) in complex with tert-butyl 6-(5-hydroxy-4-(1H-1,2,3-triazol-1-yl)-1H-pyrazol-1-yl)nicotinate (IOX4) | 分子名称: | Egl nine homolog 1, GLYCEROL, MANGANESE (II) ION, ... | 著者 | Figg Jr, W.D, McDonough, M.A, Nakashima, Y, Schofield, C.J. | 登録日 | 2020-06-08 | 公開日 | 2021-04-07 | 最終更新日 | 2024-01-24 | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | 主引用文献 | Structural Basis of Prolyl Hydroxylase Domain Inhibition by Molidustat. Chemmedchem, 16, 2021
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1Y3Q
| Structure of AlgQ1, alginate-binding protein | 分子名称: | AlgQ1, CALCIUM ION | 著者 | Momma, K, Mishima, Y, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2004-11-26 | 公開日 | 2005-04-12 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Direct Evidence for Sphingomonas sp. A1 Periplasmic Proteins as Macromolecule-Binding Proteins Associated with the ABC Transporter: Molecular Insights into Alginate Transport in the Periplasm(,) Biochemistry, 44, 2005
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1Y3P
| Structure of AlgQ1, alginate-binding protein, complexed with an alginate tetrasaccharide | 分子名称: | AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid | 著者 | Momma, K, Mishima, Y, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2004-11-26 | 公開日 | 2005-04-12 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Direct Evidence for Sphingomonas sp. A1 Periplasmic Proteins as Macromolecule-Binding Proteins Associated with the ABC Transporter: Molecular Insights into Alginate Transport in the Periplasm(,) Biochemistry, 44, 2005
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1Y3N
| Structure of AlgQ1, alginate-binding protein, complexed with an alginate disaccharide | 分子名称: | AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-alpha-D-mannopyranuronic acid | 著者 | Momma, K, Mishima, Y, Hashimoto, W, Mikami, B, Murata, K. | 登録日 | 2004-11-26 | 公開日 | 2005-04-12 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Direct Evidence for Sphingomonas sp. A1 Periplasmic Proteins as Macromolecule-Binding Proteins Associated with the ABC Transporter: Molecular Insights into Alginate Transport in the Periplasm(,) Biochemistry, 44, 2005
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1EWV
| CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 LIGAND FREE FORM II | 分子名称: | METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 | 著者 | Kunishima, N, Shimada, Y, Tsuji, Y, Jingami, H, Morikawa, K. | 登録日 | 2000-04-27 | 公開日 | 2000-12-18 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (4 Å) | 主引用文献 | Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor. Nature, 407, 2000
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5BCA
| BETA-AMYLASE FROM BACILLUS CEREUS VAR. MYCOIDES | 分子名称: | CALCIUM ION, PROTEIN (1,4-ALPHA-D-GLUCAN MALTOHYDROLASE.) | 著者 | Oyama, T, Kusunoki, M, Kishimoto, Y, Takasaki, Y, Nitta, Y. | 登録日 | 1999-03-12 | 公開日 | 2000-03-15 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Crystal structure of beta-amylase from Bacillus cereus var. mycoides at 2.2 A resolution. J.Biochem.(Tokyo), 125, 1999
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5ZX8
| Crystal structure of peptidyl-tRNA hydrolase from Thermus thermophilus | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, CITRATE ANION, Peptidyl-tRNA hydrolase | 著者 | Matsumoto, A, Uehara, U, Shimizu, Y, Ueda, T, Uchiumi, T, Ito, K. | 登録日 | 2018-05-18 | 公開日 | 2018-09-26 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1 Å) | 主引用文献 | High-resolution crystal structure of peptidyl-tRNA hydrolase from Thermus thermophilus. Proteins, 87, 2019
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1EWK
| CRYSTAL STRUCTURE OF METABOTROPIC GLUTAMATE RECEPTOR SUBTYPE 1 COMPLEXED WITH GLUTAMATE | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLUTAMIC ACID, ... | 著者 | Kunishima, N, Shimada, Y, Jingami, H, Morikawa, K. | 登録日 | 2000-04-26 | 公開日 | 2000-12-18 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor. Nature, 407, 2000
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