1ITY
 
 | | Solution structure of the DNA binding domain of human TRF1 | | 分子名称: | TRF1 | | 著者 | Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2002-02-15 | | 公開日 | 2002-03-06 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a telomeric DNA complex of human TRF1
Structure, 9, 2001
|
|
1IV6
 | | Solution Structure of the DNA Complex of Human TRF1 | | 分子名称: | 5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*AP*C)-3', 5'-D(*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3', TELOMERIC REPEAT BINDING FACTOR 1 | | 著者 | Nishikawa, T, Okamura, H, Nagadoi, A, Konig, P, Rhodes, D, Nishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2002-03-14 | | 公開日 | 2002-04-17 | | 最終更新日 | 2023-12-27 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of a telomeric DNA complex of human TRF1.
Structure, 9, 2001
|
|
1UDY
 | | Medium-Chain Acyl-CoA Dehydrogenase with 3-Thiaoctanoyl-CoA | | 分子名称: | 3-THIAOCTANOYL-COENZYME A, Acyl-CoA dehydrogenase, medium-chain specific, ... | | 著者 | Satoh, A, Nakajima, Y, Miyahara, I, Hirotsu, K, Tanaka, T, Nishina, Y, Shiga, K, Tamaoki, H, Setoyama, C, Miura, R. | | 登録日 | 2003-05-07 | | 公開日 | 2003-12-09 | | 最終更新日 | 2023-12-27 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Structure of the transition state analog of medium-chain acyl-CoA dehydrogenase. Crystallographic and molecular orbital studies on the charge-transfer complex of medium-chain acyl-CoA dehydrogenase with 3-thiaoctanoyl-CoA
J.BIOCHEM.(TOKYO), 134, 2003
|
|
1UC4
 | | Structure of diol dehydratase complexed with (S)-1,2-propanediol | | 分子名称: | AMMONIUM ION, CYANOCOBALAMIN, POTASSIUM ION, ... | | 著者 | Shibata, N, Nakanishi, Y, Fukuoka, M, Yamanishi, M, Yasuoka, N, Toraya, T. | | 登録日 | 2003-04-08 | | 公開日 | 2003-07-22 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structural rationalization for the lack of stereospecificity in coenzyme B12-dependent diol dehydratase
J.BIOL.CHEM., 278, 2003
|
|
1UC5
 | | Structure of diol dehydratase complexed with (R)-1,2-propanediol | | 分子名称: | AMMONIUM ION, CYANOCOBALAMIN, POTASSIUM ION, ... | | 著者 | Shibata, N, Nakanishi, Y, Fukuoka, M, Yamanishi, M, Yasuoka, N, Toraya, T. | | 登録日 | 2003-04-08 | | 公開日 | 2003-07-22 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | | 主引用文献 | Structural rationalization for the lack of stereospecificity in coenzyme B12-dependent diol dehydratase
J.Biol.Chem., 278, 2003
|
|
1Y1C
 | | Solution structure of Anemonia elastase inhibitor analogue | | 分子名称: | Elastase inhibitor | | 著者 | Hemmi, H, Kumazaki, T, Yoshizawa-Kumagaye, K, Nishiuchi, Y, Yoshida, T, Ohkubo, T, Kobayashi, Y. | | 登録日 | 2004-11-18 | | 公開日 | 2005-07-19 | | 最終更新日 | 2021-11-10 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural and Functional Study of an Anemonia Elastase Inhibitor, a "Nonclassical" Kazal-Type Inhibitor from Anemonia sulcata
Biochemistry, 44, 2005
|
|
1Y1B
 | | Solution structure of Anemonia elastase inhibitor | | 分子名称: | Elastase inhibitor | | 著者 | Hemmi, H, Kumazaki, T, Yoshizawa-Kumagaye, K, Nishiuchi, Y, Yoshida, T, Ohkubo, T, Kobayashi, Y. | | 登録日 | 2004-11-18 | | 公開日 | 2005-07-19 | | 最終更新日 | 2022-03-02 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Structural and Functional Study of an Anemonia Elastase Inhibitor, a "Nonclassical" Kazal-Type Inhibitor from Anemonia sulcata
Biochemistry, 44, 2005
|
|
3WP9
 | | Crystal structure of antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. | | 分子名称: | Ice-binding protein | | 著者 | Hanada, Y, Nishimiya, Y, Miura, A, Tsuda, S, Kondo, H. | | 登録日 | 2014-01-10 | | 公開日 | 2014-07-02 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Hyperactive antifreeze protein from an Antarctic sea ice bacterium Colwellia sp. has a compound ice-binding site without repetitive sequences.
Febs J., 281, 2014
|
|
7BY9
 | | Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Nicotinamide Adenine Dinucleotide (NAD) | | 分子名称: | Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXALOACETATE ION | | 著者 | Shimozawa, Y, Nakamura, T, Himiyama, T, Nishiya, Y. | | 登録日 | 2020-04-22 | | 公開日 | 2021-03-24 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus.
J.Biochem., 170, 2021
|
|
7BY8
 | |
7BYA
 | | Malate Dehydrogenase from Geobacillus stearothermophilus (gs-MDH) complexed with Oxaloacetic Acid (OAA) and Adenosine 5'-Diphosphoribose (APR) | | 分子名称: | ADENOSINE-5-DIPHOSPHORIBOSE, Malate dehydrogenase, OXALOACETATE ION | | 著者 | Shimozawa, Y, Nakamura, T, Himiyama, T, Nishiya, Y. | | 登録日 | 2020-04-22 | | 公開日 | 2021-03-24 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus.
J.Biochem., 170, 2021
|
|
3W6V
 | | Crystal structure of the DNA-binding domain of AdpA, the global transcriptional factor, in complex with a target DNA | | 分子名称: | AdpA, DNA (5'-D(*AP*GP*GP*TP*TP*GP*GP*CP*GP*GP*GP*TP*TP*CP*AP*C)-3'), DNA (5'-D(*CP*TP*GP*TP*GP*AP*AP*CP*CP*CP*GP*CP*CP*AP*AP*C)-3') | | 著者 | Yao, M.D, Ohtsuka, J, Nagata, K, Miyazono, K, Ohnishi, Y, Tanokura, M. | | 登録日 | 2013-02-22 | | 公開日 | 2013-09-18 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | | 主引用文献 | Complex Structure of the DNA-binding Domain of AdpA, the Global Transcription Factor in Streptomyces griseus, and a Target Duplex DNA Reveals the Structural Basis of Its Tolerant DNA Sequence Specificity
J.Biol.Chem., 288, 2013
|
|
5Y52
 | |
5YJ2
 | |
7BWI
 | | Solution structure of recombinant APETx1 | | 分子名称: | Kappa-actitoxin-Ael2a | | 著者 | Matsumura, K, Kobayashi, N, Kurita, J, Nishimura, Y, Yokogawa, M, Imai, S, Shimada, I, Osawa, M. | | 登録日 | 2020-04-14 | | 公開日 | 2020-12-23 | | 最終更新日 | 2021-07-14 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization.
Bmc Mol Cell Biol, 22, 2021
|
|
5Y2P
 | |
7FBH
 | | geranyl pyrophosphate C6-methyltransferase BezA | | 分子名称: | 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BezA, ... | | 著者 | Tsutsumi, H, Moriwaki, Y, Terada, T, Shimizu, K, Katsuyama, Y, Ohnishi, Y. | | 登録日 | 2021-07-10 | | 公開日 | 2021-12-01 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structural and Molecular Basis of the Catalytic Mechanism of Geranyl Pyrophosphate C6-Methyltransferase: Creation of an Unprecedented Farnesyl Pyrophosphate C6-Methyltransferase.
Angew.Chem.Int.Ed.Engl., 61, 2022
|
|
5YJA
 | |
5Z2B
 | |
5Z27
 | |
3AUU
 | | Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with D-glucose | | 分子名称: | Glucose 1-dehydrogenase 4, beta-D-glucopyranose | | 著者 | Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T. | | 登録日 | 2011-02-16 | | 公開日 | 2012-02-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
|
|
3AUS
 | |
2ZK7
 | | Structure of a C-terminal deletion mutant of Thermoplasma acidophilum aldohexose dehydrogenase (AldT) | | 分子名称: | Glucose 1-dehydrogenase related protein | | 著者 | Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, N, Tamura, T. | | 登録日 | 2008-03-12 | | 公開日 | 2009-01-13 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.71 Å) | | 主引用文献 | C-terminal tail derived from the neighboring subunit is critical for the activity of Thermoplasma acidophilum D-aldohexose dehydrogenase
Proteins, 74, 2009
|
|
3AUT
 | | Crystal structure of Bacillus megaterium glucose dehydrogenase 4 in complex with NADH | | 分子名称: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glucose 1-dehydrogenase 4 | | 著者 | Nishioka, T, Yasutake, Y, Nishiya, Y, Tamura, T. | | 登録日 | 2011-02-16 | | 公開日 | 2012-02-22 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Structure-guided mutagenesis for the improvement of substrate specificity of Bacillus megaterium glucose 1-dehydrogenase IV
Febs J., 279, 2012
|
|
1BHI
 | | STRUCTURE OF TRANSACTIVATION DOMAIN OF CRE-BP1/ATF-2, NMR, 20 STRUCTURES | | 分子名称: | CRE-BP1 | | 著者 | Nagadoi, A, Nakazawa, K, Uda, H, Maekawa, T, Ishii, S, Nishimura, Y. | | 登録日 | 1998-06-09 | | 公開日 | 1999-06-15 | | 最終更新日 | 2024-05-22 | | 実験手法 | SOLUTION NMR | | 主引用文献 | Solution structure of the transactivation domain of ATF-2 comprising a zinc finger-like subdomain and a flexible subdomain.
J.Mol.Biol., 287, 1999
|
|
