Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3RDO
DownloadVisualize
BU of 3rdo by Molmil
Crystal structure of R7-2 streptavidin complexed with biotin
分子名称: BIOTIN, GLYCEROL, NICKEL (II) ION, ...
著者Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
登録日2011-04-01
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.404 Å)
主引用文献Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3RE5
DownloadVisualize
BU of 3re5 by Molmil
Crystal structure of R4-6 streptavidin
分子名称: GLYCEROL, PENTAETHYLENE GLYCOL, Streptavidin
著者Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
登録日2011-04-02
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3R09
DownloadVisualize
BU of 3r09 by Molmil
Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
分子名称: Hydrolase, haloacid dehalogenase-like family, MAGNESIUM ION, ...
著者Vetting, M.W, Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2011-03-07
公開日2011-04-20
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
To be Published
3R0N
DownloadVisualize
BU of 3r0n by Molmil
Crystal Structure of the Immunoglobulin variable domain of Nectin-2
分子名称: CHLORIDE ION, MAGNESIUM ION, Poliovirus receptor-related protein 2
著者Ramagopal, U.A, Samanta, D, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2011-03-08
公開日2011-04-27
最終更新日2012-11-07
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structure of Nectin-2 reveals determinants of homophilic and heterophilic interactions that control cell-cell adhesion.
Proc.Natl.Acad.Sci.USA, 109, 2012
3R0U
DownloadVisualize
BU of 3r0u by Molmil
Crystal structure of NYSGRC enolase target 200555, a putative dipeptide epimerase from Francisella philomiragia : Tartrate and Mg complex
分子名称: D(-)-TARTARIC ACID, Enzyme of enolase superfamily, GLYCEROL, ...
著者Vetting, M.W, Hillerich, B, Seidel, R.D, Zencheck, W.D, Toro, R, Imker, H.J, Gerlt, J.A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-09
公開日2011-04-06
最終更新日2012-03-28
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
3PHB
DownloadVisualize
BU of 3phb by Molmil
Crystal Structure of human purine nucleoside phosphorylase in complex with DADMe-ImmG
分子名称: 2-amino-7-{[(3R,4R)-3-hydroxy-4-(hydroxymethyl)pyrrolidin-1-yl]methyl}-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase
著者Ho, M, Cassera, M.B, Murkin, A.S, Almo, S.C, Schramm, V.L.
登録日2010-11-03
公開日2011-11-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structure of human purine nucleoside phosphorylase in complex with DADMe-ImmG
to be published
3PK7
DownloadVisualize
BU of 3pk7 by Molmil
Crystal structure of D-mannonate dehydratase from Chromohalobacter salexigens with MG and Glycerol bound in the active site
分子名称: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme
著者Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
登録日2010-11-11
公開日2011-11-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.642 Å)
主引用文献Crystal structure of D-mannonate dehydratase from Chromohalobacter salexigens with MG and Glycerol bound in the active site
To be Published
3PWX
DownloadVisualize
BU of 3pwx by Molmil
Structure of putative flagellar hook-associated protein from Vibrio parahaemolyticus
分子名称: MAGNESIUM ION, Putative flagellar hook-associated protein
著者Ramagopal, U.A, Patskovsky, Y, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2010-12-09
公開日2011-01-19
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of putative flagellar hook-associated protein from Vibrio parahaemolyticus
To be published
3QPE
DownloadVisualize
BU of 3qpe by Molmil
Crystal structure of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with D-Galacturonate and 5-keto-4-deoxy-D-Galacturonate
分子名称: 4-deoxy-L-threo-hex-5-ulosuronic acid, D-galacturonic acid, GLYCEROL, ...
著者Fedorov, A.A, Fedorov, E.V, Mills-Groninger, F, Gerlt, J.A, Almo, S.C.
登録日2011-02-12
公開日2012-02-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.796 Å)
主引用文献Crystal structure of Galacturonate Dehydratase from GEOBACILLUS SP. complexed with D-Galacturonate and 5-keto-4-deoxy-D-Galacturonate
To be Published
3QU4
DownloadVisualize
BU of 3qu4 by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, asp13ala mutant
分子名称: ACETATE ION, CHLORIDE ION, INORGANIC PYROPHOSPHATASE, ...
著者Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
登録日2011-02-23
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3QUB
DownloadVisualize
BU of 3qub by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47ala mutant complexed with sulfate
分子名称: INORGANIC PYROPHOSPHATASE, SULFATE ION
著者Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
登録日2011-02-23
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3QUQ
DownloadVisualize
BU of 3quq by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, an open cap conformation
分子名称: CHLORIDE ION, FORMIC ACID, INORGANIC PYROPHOSPHATASE, ...
著者Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
登録日2011-02-24
公開日2011-04-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3QX7
DownloadVisualize
BU of 3qx7 by Molmil
Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron complexed with phosphate, a closed cap conformation
分子名称: INORGANIC PYROPHOSPHATASE, MAGNESIUM ION, PHOSPHATE ION
著者Patskovsky, Y, Huang, H, Toro, R, Gerlt, J.A, Burley, S.K, Dunaway-Mariano, D, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC), Enzyme Function Initiative (EFI)
登録日2011-03-01
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Divergence of Structure and Function in the Haloacid Dehalogenase Enzyme Superfamily: Bacteroides thetaiotaomicron BT2127 Is an Inorganic Pyrophosphatase.
Biochemistry, 50, 2011
3RLU
DownloadVisualize
BU of 3rlu by Molmil
Crystal structure of the mutant K82A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with the inhibitor BMP
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, Orotidine 5'-phosphate decarboxylase
著者Fedorov, A.A, Fedorov, E.V, Desai, B, Gerlt, J.A, Almo, S.C.
登録日2011-04-20
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Conformational changes in orotidine 5'-monophosphate decarboxylase: a structure-based explanation for how the 5'-phosphate group activates the enzyme.
Biochemistry, 51, 2012
3RMT
DownloadVisualize
BU of 3rmt by Molmil
Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
分子名称: 3-phosphoshikimate 1-carboxyvinyltransferase 1, SULFATE ION
著者Malashkevich, V.N, Toro, R, Seidel, R, Ramagopal, U, Zencheck, W, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-21
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of putative 5-enolpyruvoylshikimate-3-phosphate synthase from Bacillus halodurans C-125
To be Published
3R6A
DownloadVisualize
BU of 3r6a by Molmil
Crystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
分子名称: ACETATE ION, Uncharacterized protein
著者Eswaramoorthy, S, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-21
公開日2011-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Crystal structure of an uncharacterized protein (hypothetical protein MM_3218) from Methanosarcina mazei.
To be Published
3R25
DownloadVisualize
BU of 3r25 by Molmil
Crystal structure of enolase superfamily member from Vibrionales bacterium complexed with Mg and Glycerol in the active site
分子名称: GLYCEROL, MAGNESIUM ION, mandelate racemase / muconate lactonizing enzyme
著者Fedorov, A.A, Fedorov, E.V, Wichelecki, D, Gerlt, J.A, Almo, S.C.
登録日2011-03-13
公開日2012-03-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.603 Å)
主引用文献Crystal structure of enolase superfamily member from VIBRIONALES BACTERIUM complexed with Mg and Glycerol in the active site
To be Published
3R64
DownloadVisualize
BU of 3r64 by Molmil
Crystal structure of a NAD-dependent benzaldehyde dehydrogenase from Corynebacterium glutamicum
分子名称: NAD dependent benzaldehyde dehydrogenase
著者Agarwal, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-21
公開日2011-04-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.57 Å)
主引用文献Crystal structure of a NAD-dependent benzaldehyde dehydrogenase from Corynebacterium glutamicum
To be Published
3RP1
DownloadVisualize
BU of 3rp1 by Molmil
Crystal structure of Human LAIR-1 in C2 space group
分子名称: Leukocyte-associated immunoglobulin-like receptor 1
著者Sampathkumar, P, Ramagopal, U.A, Yan, Q, Toro, R, Nathenson, S, Bonanno, J, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-26
公開日2011-06-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Human LAIR-1 in C2 space group
To be Published
3RDS
DownloadVisualize
BU of 3rds by Molmil
Crystal structure of the refolded R7-2 streptavidin
分子名称: PENTAETHYLENE GLYCOL, Streptavidin
著者Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C.
登録日2011-04-01
公開日2011-07-06
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding.
Protein Sci., 20, 2011
3R2G
DownloadVisualize
BU of 3r2g by Molmil
Crystal structure of Inosine 5' monophosphate dehydrogenase from Legionella pneumophila
分子名称: Inosine 5'-monophosphate dehydrogenase
著者Agarwal, R, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-14
公開日2011-04-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.941 Å)
主引用文献Crystal structure of Inosine 5' monophosphate dehydrogenase from Legionella pneumophila
To be Published
3RJL
DownloadVisualize
BU of 3rjl by Molmil
Crystal structure of 1-pyrroline-5-carboxylate dehydrogenase from Bacillus licheniformis (Target NYSGRC-000337)
分子名称: 1-pyrroline-5-carboxylate dehydrogenase, ACETATE ION, CADMIUM ION
著者Patskovsky, Y, Toro, R, Foti, R, Seidel, R.D, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-04-15
公開日2011-04-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of 1-Pyrroline-5-Carboxylate Dehydrogenase from Bacillus Licheniformis
To be Published
3R79
DownloadVisualize
BU of 3r79 by Molmil
Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens
分子名称: ACETATE ION, PRASEODYMIUM ION, PYRIDOXAL-5'-PHOSPHATE, ...
著者Eswaramoorthy, S, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC)
登録日2011-03-22
公開日2011-04-06
最終更新日2012-02-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of an uncharactertized protein from Agrobacterium tumefaciens
To be Published
3RNQ
DownloadVisualize
BU of 3rnq by Molmil
Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
分子名称: Programmed cell death 1 ligand 2, Programmed cell death protein 1
著者Lazar-Molnar, E, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
登録日2011-04-22
公開日2011-06-01
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the complex between the extracellular domains of mouse PD-1 mutant and PD-L2
To be Published
3RBG
DownloadVisualize
BU of 3rbg by Molmil
Crystal structure analysis of Class-I MHC restricted T-cell associated molecule
分子名称: Cytotoxic and regulatory T-cell molecule, PHOSPHATE ION
著者Rubinstein, R, Ramagopal, U.A, Toro, R, Nathenson, S.G, Fiser, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2011-03-29
公開日2011-05-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Functional classification of immune regulatory proteins.
Structure, 21, 2013

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon