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The structure of TT1380 protein from thermus thermophilus
分子名称:	ZINC ION, hypothetical protein TT1380
著者	Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R.H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2002-03-05
公開日	2003-09-09
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8 Proteins, 55, 2004

1IWH

Crystal Structure of Horse Carbonmonoxyhemoglobin-Bezafibrate Complex at 1.55A Resolution: A Novel Allosteric Binding Site in R-State Hemoglobin
分子名称:	2-[P-[2-P-CHLOROBENZAMIDO)ETHYL]PHENOXY]-2-METHYLPROPIONIC ACID, CARBON MONOXIDE, Hemoglobin alpha chain, ...
著者	Shibayama, N, Miura, S, Tame, J.R.H, Yonetani, T, Park, S.-Y.
登録日	2002-05-15
公開日	2002-10-02
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Crystal Structure of Horse Carbonmonoxyhemoglobin-Bezafibrate Complex at 1.55A Resolution. A Novel Allosteric Binding Site in R-State Hemoglobin J.BIOL.CHEM., 277, 2002

1J3Y

Direct observation of photolysis-induced tertiary structural changes in human hemoglobin; Crystal structure of alpha(Fe)-beta(Ni) hemoglobin (laser photolysed)
分子名称:	BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin alpha Chain, ...
著者	Adachi, S, Park, S.-Y, Tame, J.R.H, Shiro, Y, Shibayama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-02-21
公開日	2003-07-22
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Direct observation of photolysis-induced tertiary structural changes in hemoglobin Proc.Natl.Acad.Sci.USA, 100, 2003

1J3Z

Direct observation of photolysis-induced tertiary structural changes in human haemoglobin; Crystal structure of alpha(Fe-CO)-beta(Ni) hemoglobin (laser unphotolysed)
分子名称:	BUT-2-ENEDIAL, CARBON MONOXIDE, Hemoglobin alpha Chain, ...
著者	Adachi, S, Park, S.-Y, Tame, J.R.H, Shiro, Y, Shibayama, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-02-21
公開日	2003-07-22
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Direct observation of photolysis-induced tertiary structural changes in hemoglobin Proc.Natl.Acad.Sci.USA, 100, 2003

1B9J

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KLK
分子名称:	PROTEIN (LYS-LEU-LYS), PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN), URANYL (VI) ION
著者	Tame, J.R.H, Wilkinson, A.J.
登録日	1999-02-11
公開日	1999-02-22
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Crystallographic and calorimetric analysis of peptide binding to OppA protein. J.Mol.Biol., 291, 1999

2OLB

OLIGOPEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH TRI-LYSINE
分子名称:	ACETATE ION, OLIGO-PEPTIDE BINDING PROTEIN, TRIPEPTIDE LYS-LYS-LYS, ...
著者	Tame, J, Wilkinson, A.J.
登録日	1995-09-10
公開日	1996-01-29
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	The crystal structures of the oligopeptide-binding protein OppA complexed with tripeptide and tetrapeptide ligands. Structure, 3, 1995

1OLC

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH LYS-LYS-LYS-ALA
分子名称:	LYS-LYS-LYS-ALA, OLIGO-PEPTIDE BINDING PROTEIN, URANYL (VI) ION
著者	Tame, J, Wilkinson, A.J.
登録日	1995-09-10
公開日	1996-01-29
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	The crystal structures of the oligopeptide-binding protein OppA complexed with tripeptide and tetrapeptide ligands. Structure, 3, 1995

8IC0

Cryo-EM structure of CXCL8 bound C-X-C chemokine receptor 1 in complex with Gi heterotrimer
分子名称:	C-X-C chemokine receptor type 1, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者	Ishimoto, N, Park, J.H, Park, S.Y.
登録日	2023-02-10
公開日	2023-07-19
実験手法	ELECTRON MICROSCOPY (3.41 Å)
主引用文献	Structural basis of CXC chemokine receptor 1 ligand binding and activation. Nat Commun, 14, 2023

1WUB

Crystal structure of the polyisoprenoid-binding protein, TT1927b, from Thermus thermophilus HB8
分子名称:	(2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, conserved hypothetical protein TT1927b
著者	Handa, N, Idaka, M, Terada, T, Hamana, H, Ishizuka, Y, Park, S.-Y, Tame, J.R.H, Doi-Katayama, Y, Hirota, H, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2004-12-03
公開日	2004-12-21
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (1.65 Å)
主引用文献	Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8 Protein Sci., 14, 2005

8H2G

Cryo-EM structure of niacin bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
分子名称:	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
著者	Park, J.H, Ishimoto, N, Park, S.Y.
登録日	2022-10-06
公開日	2023-10-11
実験手法	ELECTRON MICROSCOPY (3.01 Å)
主引用文献	Structural basis for hydroxy-carboxylic acid receptor 2 activation and allosteric mechanism To Be Published

2NOO

Crystal Structure of Mutant NikA
分子名称:	IODIDE ION, NICKEL (II) ION, Nickel-binding periplasmic protein
著者	Addy, C, Ohara, M, Kawai, F, Kidera, A, Ikeguchi, M, Fuchigami, S, Osawa, M, Shimada, I, Park, S.Y, Tame, J.R.H, Heddle, J.G.
登録日	2006-10-26
公開日	2007-01-23
最終更新日	2023-10-25
実験手法	X-RAY DIFFRACTION (1.65 Å)
主引用文献	Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography. Acta Crystallogr.,Sect.D, 63, 2007

1GCV

DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS
分子名称:	HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
著者	Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
登録日	2000-08-08
公開日	2000-08-31
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	The functional similarity and structural diversity of human and cartilaginous fish hemoglobins. J.Mol.Biol., 307, 2001

1GCW

CO form hemoglobin from mustelus griseus
分子名称:	CARBON MONOXIDE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
著者	Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
登録日	2000-08-08
公開日	2000-09-06
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	The functional similarity and structural diversity of human and cartilaginous fish hemoglobins. J.Mol.Biol., 307, 2001

4OKV

Crystal structure of anopheline anti-platelet protein with Fab antibody
分子名称:	Anti-platelet aggregation protein, heavy chain of 8H7 mAb, light chain of 8H7 mAb
著者	Park, S.Y, Sugiyama, K.
登録日	2014-01-23
公開日	2014-04-30
実験手法	X-RAY DIFFRACTION (1.802 Å)
主引用文献	The crystal structure of anopheles anti-platelet protein, a powerful anti-coagulant, in complex with an antibody To be Published

6Y7N

The crystal structure of the eight-bladed symmetrical designer protein Tako8 in the presence of tellurotungstic Anderson-Evans (TEW)
分子名称:	Tako8
著者	Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日	2020-03-02
公開日	2020-12-16
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.6 Å)
主引用文献	Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters Cryst.Growth Des., 2021

6Y7P

The complex between the eight-bladed symmetrical designer protein Tako8 and 1:2 zirconium(IV) Wells-Dawson (ZrWD)
分子名称:	Tako8, W-Zr-cluster
著者	Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日	2020-03-02
公開日	2020-12-16
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (1.75 Å)
主引用文献	Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters Cryst.Growth Des., 2021

6Y7O

The complex between the eight-bladed symmetrical designer protein Tako8 and the silicotungstic acid Keggin (STA)
分子名称:	Keggin (STA), Tako8
著者	Vandebroek, L, Noguchi, H, Parac-Vogt, T.N, Van Meervelt, L, Voet, A.R.D.
登録日	2020-03-02
公開日	2020-12-16
最終更新日	2024-01-24
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Shape and Size Complementarity-Induced Formation of Supramolecular Protein Assemblies with Metal-Oxo Clusters Cryst.Growth Des., 2021

1JEU

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KEK
分子名称:	OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS GLU LYS, URANYL (VI) ION
著者	Tame, J, Wilkinson, A.J.
登録日	1996-07-03
公開日	1997-05-15
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.25 Å)
主引用文献	The role of water in sequence-independent ligand binding by an oligopeptide transporter protein. Nat.Struct.Biol., 3, 1996

4YUS

Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in hexagonal form
分子名称:	FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase
著者	Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M.
登録日	2015-03-19
公開日	2016-06-01
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium Proc.Natl.Acad.Sci.USA, 113, 2016

1JEV

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK
分子名称:	OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS TRP LYS, URANYL (VI) ION
著者	Tame, J, Wilkinson, A.J.
登録日	1996-07-03
公開日	1997-05-15
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (1.3 Å)
主引用文献	The role of water in sequence-independent ligand binding by an oligopeptide transporter protein. Nat.Struct.Biol., 3, 1996

1JET

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KAK
分子名称:	OLIGO-PEPTIDE BINDING PROTEIN, PEPTIDE LYS ALA LYS, URANYL (VI) ION
著者	Tame, J, Wilkinson, A.J.
登録日	1996-07-03
公開日	1997-05-15
最終更新日	2023-08-09
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	The role of water in sequence-independent ligand binding by an oligopeptide transporter protein. Nat.Struct.Biol., 3, 1996

4YUT

Crystal structure of photoactivated adenylyl cyclase of a cyanobacteriaOscillatoria acuminata in orthorhombic form
分子名称:	FLAVIN MONONUCLEOTIDE, Family 3 adenylate cyclase
著者	Park, S.-Y, Ohki, M, Sugiyama, K, Kawai, F, Iseki, M.
登録日	2015-03-19
公開日	2016-06-01
最終更新日	2024-03-20
実験手法	X-RAY DIFFRACTION (2.9 Å)
主引用文献	Structural insight into photoactivation of an adenylate cyclase from a photosynthetic cyanobacterium Proc.Natl.Acad.Sci.USA, 113, 2016

8I7W

Cryo-EM structure of GSK256073 bound human hydroxy-carboxylic acid receptor 2 in complex with Gi heterotrimer
分子名称:	8-chloranyl-3-pentyl-7H-purine-2,6-dione, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者	Park, J.H, Ishimoto, N, Park, S.Y.
登録日	2023-02-02
公開日	2024-02-07
実験手法	ELECTRON MICROSCOPY (3.39 Å)
主引用文献	Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023

7XBD

Cryo-EM structure of human galanin receptor 2
分子名称:	Galanin, Galanin receptor type 2, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
著者	Ishimoto, N, Kita, S, Park, S.Y.
登録日	2022-03-21
公開日	2022-07-13
最終更新日	2022-08-10
実験手法	ELECTRON MICROSCOPY (3.11 Å)
主引用文献	Structure of the human galanin receptor 2 bound to galanin and Gq reveals the basis of ligand specificity and how binding affects the G-protein interface. Plos Biol., 20, 2022

8K5C

Cryo-EM structure of Acipimox bound human hydroxy-carboxylic acid receptor 2 (Local refinement)
分子名称:	5-methyl-4-oxidanyl-pyrazin-4-ium-2-carboxylic acid, Human hydroxycarboxylic acid receptor 2
著者	Park, J.H, Ishimoto, N, Park, S.Y.
登録日	2023-07-21
公開日	2023-11-22
最終更新日	2024-05-08
実験手法	ELECTRON MICROSCOPY (3.13 Å)
主引用文献	Structural basis for ligand recognition and signaling of hydroxy-carboxylic acid receptor 2. Nat Commun, 14, 2023

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