Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8B3A
DownloadVisualize
BU of 8b3a by Molmil
catalytic amyloid fibril formed by Ac-LHLHLRL-amide
分子名称: ACE-LEU-HIS-LEU-HIS-LEU-ARG-LEU-NH2
著者Heerde, T, Schmidt, M, Faendrich, M.
登録日2022-09-16
公開日2023-04-05
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Cryo-EM structure of a catalytic amyloid fibril.
Sci Rep, 13, 2023
1T19
DownloadVisualize
BU of 1t19 by Molmil
Early intermediate IE2 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1T1A
DownloadVisualize
BU of 1t1a by Molmil
Late intermediate IL1 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1T1B
DownloadVisualize
BU of 1t1b by Molmil
Late intermediate IL2 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1T1C
DownloadVisualize
BU of 1t1c by Molmil
Late intermediate IL3 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
1T18
DownloadVisualize
BU of 1t18 by Molmil
Early intermediate IE1 from time-resolved crystallography of the E46Q mutant of PYP
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Rajagopal, S, Anderson, S, Srajer, V, Schmidt, M, Pahl, R, Moffat, K.
登録日2004-04-15
公開日2005-01-18
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Structural Pathway for Signaling in the E46Q Mutant of Photoactive Yellow Protein
Structure, 13, 2005
5LBR
DownloadVisualize
BU of 5lbr by Molmil
Wild-type PAS-GAF fragment from Deinococcus radiodurans Bphp collected at SACLA
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, ACETATE ION, Bacteriophytochrome
著者Edlund, P, Claesson, E, Nakane, T, Takala, H, Dods, R, Schmidt, M, Westenhoff, S.
登録日2016-06-17
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.
Sci Rep, 6, 2016
5L8M
DownloadVisualize
BU of 5l8m by Molmil
Wild-type PAS-GAF fragment from Deinococcus radiodurans Bphp collected at LCLS
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, ACETATE ION, Bacteriophytochrome
著者Claesson, E, Takala, H, Edlund, P, Henry, L, Dods, R, Schmidt, M, Westenhoff, S.
登録日2016-06-08
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The room temperature crystal structure of a bacterial phytochrome determined by serial femtosecond crystallography.
Sci Rep, 6, 2016
8OQ4
DownloadVisualize
BU of 8oq4 by Molmil
AApoAII amyloid fibril Morphology II (ex vivo)
分子名称: Apolipoprotein A-II
著者Andreotti, G, Schmidt, M, Faendrich, M.
登録日2023-04-11
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Insights into the Structural Basis of Amyloid Resistance Provided by Cryo-EM Structures of AApoAII Amyloid Fibrils.
J.Mol.Biol., 436, 2024
7MPB
DownloadVisualize
BU of 7mpb by Molmil
SARS Coronavirus-2 Main Protease 3CL-pro binding Ascorbate
分子名称: 3C-like proteinase, ASCORBIC ACID, TRIFLUOROETHANOL
著者Pandey, S, Malla, T.N, Stojkovic, E.A, Schmidt, M.
登録日2021-05-04
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Vitamin C inhibits SARS coronavirus-2 main protease essential for viral replication
Biorxiv, 2021
8QXB
DownloadVisualize
BU of 8qxb by Molmil
TDP-43 amyloid fibrils: Morphology-2
分子名称: TAR DNA-binding protein 43
著者Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M.
登録日2023-10-24
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun, 15, 2024
8QXA
DownloadVisualize
BU of 8qxa by Molmil
TDP-43 amyloid fibrils: Morphology-1b
分子名称: TAR DNA-binding protein 43
著者Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M.
登録日2023-10-24
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun, 15, 2024
8QX9
DownloadVisualize
BU of 8qx9 by Molmil
TDP-43 amyloid fibrils: Morphology-1a
分子名称: TAR DNA-binding protein 43
著者Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M.
登録日2023-10-24
公開日2024-01-24
実験手法ELECTRON MICROSCOPY (3.76 Å)
主引用文献Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils.
Nat Commun, 15, 2024
8PKE
DownloadVisualize
BU of 8pke by Molmil
ATTRV20I amyloid fibril from hereditary ATTR amloidosis
分子名称: Transthyretin
著者Steinebrei, M, Schmidt, M, Faendrich, M.
登録日2023-06-26
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Common transthyretin-derived amyloid fibril structures in patients with hereditary ATTR amyloidosis.
Nat Commun, 14, 2023
8PKG
DownloadVisualize
BU of 8pkg by Molmil
ATTRV122I amyloid fibril from hereditary ATTR amloidosis
分子名称: Transthyretin
著者Steinebrei, M, Schmidt, M, Faendrich, M.
登録日2023-06-26
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Common transthyretin-derived amyloid fibril structures in patients with hereditary ATTR amyloidosis.
Nat Commun, 14, 2023
8PKF
DownloadVisualize
BU of 8pkf by Molmil
ATTRG47E amyloid fibril from hereditary ATTR amloidosis
分子名称: Transthyretin
著者Steinebrei, M, Schmidt, M, Faendrich, M.
登録日2023-06-26
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.3673 Å)
主引用文献Common transthyretin-derived amyloid fibril structures in patients with hereditary ATTR amyloidosis.
Nat Commun, 14, 2023
8OT1
DownloadVisualize
BU of 8ot1 by Molmil
unseeded Abeta(1-40) amyloid fibril (morphology i)
分子名称: Amyloid-beta A4 protein
著者Pfeiffer, P.B, Schmidt, M, Faendrich, M.
登録日2023-04-20
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Cryo-EM Analysis of the Effect of Seeding with Brain-derived A beta Amyloid Fibrils.
J.Mol.Biol., 436, 2023
8OT3
DownloadVisualize
BU of 8ot3 by Molmil
unseeded Abeta(1-40) amyloid fibril (morphology ii)
分子名称: Amyloid-beta A4 protein
著者Pfeiffer, P.B, Schmidt, M, Faendrich, M.
登録日2023-04-20
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (2.73 Å)
主引用文献Cryo-EM Analysis of the Effect of Seeding with Brain-derived A beta Amyloid Fibrils.
J.Mol.Biol., 436, 2023
8OQ5
DownloadVisualize
BU of 8oq5 by Molmil
AApoAII amyloid fibril Morphology I (ex vivo)
分子名称: Apolipoprotein A-II
著者Andreotti, G, Schmidt, M, Faendrich, M.
登録日2023-04-11
公開日2024-02-21
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Insights into the Structural Basis of Amyloid Resistance Provided by Cryo-EM Structures of AApoAII Amyloid Fibrils.
J.Mol.Biol., 436, 2024
8OT4
DownloadVisualize
BU of 8ot4 by Molmil
seeded Abeta(1-40) amyloid fibril (morphology I)
分子名称: Amyloid-beta A4 protein
著者Pfeiffer, P.B, Schmidt, M, Faendrich, M.
登録日2023-04-20
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (2.97 Å)
主引用文献Cryo-EM Analysis of the Effect of Seeding with Brain-derived A beta Amyloid Fibrils.
J.Mol.Biol., 436, 2023
3UBR
DownloadVisualize
BU of 3ubr by Molmil
Laue structure of Shewanella oneidensis cytochrome-c Nitrite Reductase
分子名称: CALCIUM ION, Cytochrome c-552, HEME C
著者Youngblut, M, Judd, E.T, Srajer, V, Sayed, B, Goeltzner, T, Elliott, S, Schmidt, M, Pacheco, A.
登録日2011-10-24
公開日2012-04-25
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Laue crystal structure of Shewanella oneidensis cytochrome c nitrite reductase from a high-yield expression system.
J.Biol.Inorg.Chem., 17, 2012
8R47
DownloadVisualize
BU of 8r47 by Molmil
AL amyloid fibril from the FOR010 light chain
分子名称: lambda 3 immunoglobulin light chain fragment, residues 4-116
著者Pfeiffer, P.B, Banerjee, S, Schmidt, M, Faendrich, M.
登録日2023-11-13
公開日2024-06-26
実験手法ELECTRON MICROSCOPY (2.25 Å)
主引用文献Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.
Nat Commun, 15, 2024
6IC3
DownloadVisualize
BU of 6ic3 by Molmil
AL amyloid fibril from a lambda 1 light chain
分子名称: lambda 1 light chain fragment, residues 3-118
著者Fritz, G, Faendrich, M, Schmidt, M, Radamaker, L.
登録日2018-12-02
公開日2019-04-03
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structure of a light chain-derived amyloid fibril from a patient with systemic AL amyloidosis.
Nat Commun, 10, 2019
4GER
DownloadVisualize
BU of 4ger by Molmil
Crystal structure of Gentlyase, the neutral metalloprotease of Paenibacillus polymyxa
分子名称: CALCIUM ION, Gentlyase metalloprotease, LYSINE, ...
著者Ruf, A, Stihle, M, Benz, J, Schmidt, M, Sobek, H.
登録日2012-08-02
公開日2013-01-02
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structure of Gentlyase, the neutral metalloprotease of Paenibacillus polymyxa.
Acta Crystallogr.,Sect.D, 69, 2013
4HY8
DownloadVisualize
BU of 4hy8 by Molmil
Structures of PR1 and PR2 intermediates from time-resolved laue crystallography
分子名称: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
著者Jung, Y.O, Lee, J.H, Kim, J, Schmidt, M, Vukica, S, Wulff, M, Moffat, K.
登録日2012-11-13
公開日2013-03-20
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography
NAT.CHEM., 5, 2013

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon