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7Q71
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BU of 7q71 by Molmil
The crystallographic structure of the Ligand Binding domain of the NR7 nuclear receptor from the amphioxus Branchiostoma lanceolatum
分子名称: CHLORIDE ION, Nuclear hormone receptor 7, PHOSPHATE ION
著者Billas, I.M.L, McEwen, A.G, Hazemann, I, Moras, D, Laudet, V.
登録日2021-11-09
公開日2022-09-14
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A novel nuclear receptor subfamily enlightens the origin of heterodimerization.
Bmc Biol., 20, 2022
6B67
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BU of 6b67 by Molmil
Human PP2Calpha (PPM1A) complexed with cyclic peptide c(MpSIpYVA)
分子名称: CALCIUM ION, Protein phosphatase 1A, cyclic peptide c(MpSIpYVA)
著者Dyda, F, Kosek, D.
登録日2017-10-01
公開日2018-04-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A trapped human PPM1A-phosphopeptide complex reveals structural features critical for regulation of PPM protein phosphatase activity.
J. Biol. Chem., 293, 2018
7Q6F
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BU of 7q6f by Molmil
Vibrio maritimus FtsA 1-396 ATP, double filament
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Cell division protein FtsA, MAGNESIUM ION
著者Nierhaus, T, Kureisaite-Ciziene, D, Lowe, J.
登録日2021-11-07
公開日2022-09-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Bacterial divisome protein FtsA forms curved antiparallel double filaments when binding to FtsN.
Nat Microbiol, 7, 2022
6AYE
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BU of 6aye by Molmil
Human apo-TRPML3 channel at pH 7.4
分子名称: Mucolipin-3
著者Zhou, X, Li, M, Su, D, Jia, Q, Li, H, Li, X, Yang, J.
登録日2017-09-08
公開日2017-11-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Cryo-EM structures of the human endolysosomal TRPML3 channel in three distinct states.
Nat. Struct. Mol. Biol., 24, 2017
6AZ1
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BU of 6az1 by Molmil
Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin
分子名称: E-site tRNA, LACK1, MAGNESIUM ION, ...
著者Shalev-Benami, M, Zhang, Y, Rozenberg, H, Matzov, D, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G.
登録日2017-09-09
公開日2017-12-06
最終更新日2019-07-03
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Atomic resolution snapshot of Leishmania ribosome inhibition by the aminoglycoside paromomycin.
Nat Commun, 8, 2017
6ATV
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BU of 6atv by Molmil
The molecular mechanisms by which NS1 of the 1918 Spanish influenza A virus hijack host protein-protein interactions
分子名称: Adapter molecule crk, proline-rich motif in IAV-NS1
著者Shen, Q, Zeng, D, Zhao, B, Li, P, Cho, J.H.
登録日2017-08-29
公開日2018-08-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.751 Å)
主引用文献Molecular Mechanisms of Tight Binding through Fuzzy Interactions.
Biophys. J., 114, 2018
7JZN
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BU of 7jzn by Molmil
SARS-CoV-2 spike in complex with LCB3 (2RBDs open)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LCB3, ...
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2020-09-02
公開日2020-09-23
最終更新日2020-11-04
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献De novo design of picomolar SARS-CoV-2 miniprotein inhibitors.
Science, 370, 2020
7WEJ
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BU of 7wej by Molmil
Crystal structure of the mouse Wdr47 NTD.
分子名称: WD repeat-containing protein 47
著者Ren, J.Q, Li, D, Feng, W.
登録日2021-12-23
公開日2022-11-30
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Intertwined Wdr47-NTD dimer recognizes a basic-helical motif in Camsap proteins for proper central-pair microtubule formation.
Cell Rep, 41, 2022
6AX4
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Plk-1 polo-box domain in complex with histidine N(tau)-cyclized Macrocycle 5b.
分子名称: AMYLAMINE, Serine/threonine-protein kinase PLK1, histidine N(tau)-cyclized Macrocycle 5b
著者Grant, R.A, Hymel, D, Yaffe, M.B, Burke, T.R.
登録日2017-09-06
公開日2018-09-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Histidine N( tau )-cyclized macrocycles as a new genre of polo-like kinase 1 polo-box domain-binding inhibitors.
Bioorg. Med. Chem. Lett., 28, 2018
7WEK
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BU of 7wek by Molmil
Crystal structure of the mouse Wdr47 NTD in complex with the WBR motif form Camsap3.
分子名称: WBR motif form Calmodulin-regulated spectrin-associated protein 3, WD repeat-containing protein 47
著者Ren, J.Q, Li, D, Feng, W.
登録日2021-12-23
公開日2022-11-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.21 Å)
主引用文献Intertwined Wdr47-NTD dimer recognizes a basic-helical motif in Camsap proteins for proper central-pair microtubule formation.
Cell Rep, 41, 2022
7FC0
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BU of 7fc0 by Molmil
Reconstitution of MbnABC complex from Rugamonas rubra ATCC-43154 (GroupIII)
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Chao, D, Zhaolin, L, Shoujie, L, Li, Z, Dan, Z, Ying, J, Wei, C.
登録日2021-07-13
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.643 Å)
主引用文献Crystal structure and catalytic mechanism of the MbnBC holoenzyme required for methanobactin biosynthesis.
Cell Res., 32, 2022
7QY4
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BU of 7qy4 by Molmil
As isolated MSOX movie series dataset 5 (2 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
著者Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
登録日2022-01-27
公開日2022-08-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
7QYQ
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BU of 7qyq by Molmil
Crystal structure of a DyP-type peroxidase from Pseudomonas putida
分子名称: Dyp-type peroxidase family protein, PROTOPORPHYRIN IX CONTAINING FE
著者Borges, P.T, Silva, D, Frazao, C, Martins, L.O.
登録日2022-01-28
公開日2022-08-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.599 Å)
主引用文献Unveiling molecular details behind improved activity at neutral to alkaline pH of an engineered DyP-type peroxidase.
Comput Struct Biotechnol J, 20, 2022
2J78
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BU of 2j78 by Molmil
Beta-glucosidase from Thermotoga maritima in complex with gluco- hydroximolactam
分子名称: (2S,3S,4R,5R)-6-(HYDROXYAMINO)-2-(HYDROXYMETHYL)-2,3,4,5-TETRAHYDROPYRIDINE-3,4,5-TRIOL, 1,2-ETHANEDIOL, ACETATE ION, ...
著者Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
登録日2006-10-06
公開日2006-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
7QXK
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BU of 7qxk by Molmil
As isolated MSOX movie series dataset 1 (0.4 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
著者Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
登録日2022-01-26
公開日2022-08-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
2J7D
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BU of 2j7d by Molmil
Beta-glucosidase from Thermotoga maritima in complex with methoxycarbonyl-substituted glucoimidazole
分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ...
著者Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
登録日2006-10-06
公開日2006-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
6BEB
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BU of 6beb by Molmil
Crystal structure of VACV D13 in complex with Rifamycin SV
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Scaffold protein D13, ...
著者Garriga, D, Accurso, C, Coulibaly, F.
登録日2017-10-25
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7QYC
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BU of 7qyc by Molmil
As isolated MSOX movie series dataset 20 (8 MGy) of the copper nitrite reductase from Bradyrhizobium sp. ORS 375 (two-domain)
分子名称: COPPER (II) ION, Copper-containing nitrite reductase, GLYCEROL, ...
著者Rose, S.L, Baba, S, Okumura, H, Antonyuk, S.V, Sasaki, D, Tosha, T, Kumasaka, T, Eady, R.R, Yamamoto, M, Hasnain, S.S.
登録日2022-01-27
公開日2022-08-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Single crystal spectroscopy and multiple structures from one crystal (MSOX) define catalysis in copper nitrite reductases.
Proc.Natl.Acad.Sci.USA, 119, 2022
7W9H
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BU of 7w9h by Molmil
Crystal structure of the receiver domain of the transcription regulator FleR from Pseudomonas aeruginosa
分子名称: ACETATE ION, CALCIUM ION, Response regulator protein FleR
著者Sahoo, P.K, Sheenu, n, Jain, D.
登録日2021-12-09
公開日2022-12-14
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献REC domain stabilizes the active heptamer of sigma 54 -dependent transcription factor, FleR from Pseudomonas aeruginosa.
Iscience, 26, 2023
6BDO
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BU of 6bdo by Molmil
Structure of bacterial type II NADH dehydrogenase from Caldalkalibacillus thermarum complexed with a quinone inhibitor HQNO at 2.8A resolution
分子名称: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE
著者Cook, G.M, Aragao, D, Nakatani, Y.
登録日2017-10-23
公開日2018-05-16
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the NDH-2 - HQNO inhibited complex provides molecular insight into quinone-binding site inhibitors.
Biochim. Biophys. Acta, 1859, 2018
6BEH
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BU of 6beh by Molmil
Crystal structure of VACV D13 in complex with Rifapentine
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, RIFAPENTINE, ...
著者Garriga, D, Accurso, C, Coulibaly, F.
登録日2017-10-25
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the inhibition of poxvirus assembly by the antibiotic rifampicin.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6AVU
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BU of 6avu by Molmil
Human alpha-V beta-3 Integrin (open conformation) in complex with the therapeutic antibody LM609
分子名称: Fab LM609 heavy chain, Fab LM609 light chain, Integrin alpha-V, ...
著者Borst, A.J, James, Z.N, Zagotta, W.N, Ginsberg, M, Rey, F.A, DiMaio, F, Backovic, M, Veesler, D.
登録日2017-09-04
公開日2017-11-01
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献The Therapeutic Antibody LM609 Selectively Inhibits Ligand Binding to Human alpha V beta 3 Integrin via Steric Hindrance.
Structure, 25, 2017
5T4L
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BU of 5t4l by Molmil
PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
分子名称: (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid, Aspartate aminotransferase
著者Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
登録日2016-08-29
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2J7G
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BU of 2j7g by Molmil
Beta-glucosidase from Thermotoga maritima in complex with methyl acetic acid-substituted glucoimidazole
分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ...
著者Gloster, T.M, Zechel, D, Vasella, A, Davies, G.J.
登録日2006-10-07
公開日2006-10-18
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Glycosidase Inhibition: An Assessment of the Binding of 18 Putative Transition-State Mimics.
J.Am.Chem.Soc., 129, 2007
6B1B
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BU of 6b1b by Molmil
STRUCTURE OF 4-HYDROXYPHENYLACETATE 3-MONOOXYGENASE (HPAB), OXYGENASE COMPONENT FROM ESCHERICHIA COLI MUTANT XS6 (APO Enzyme)
分子名称: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit, trimethylamine oxide
著者Zhou, D, Kandavelu, P, Wang, B.C, Yan, Y, Rose, J.P.
登録日2017-09-18
公開日2019-05-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.944 Å)
主引用文献Structural Insights into Catalytic Versatility of the Flavin-dependent Hydroxylase (HpaB) from Escherichia coli.
Sci Rep, 9, 2019

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