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8UAF
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BU of 8uaf by Molmil
E. coli Sir2_HerA complex (12:6) bound with NAD+
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Shen, Z.F, Lin, Q.P, Fu, T.M.
登録日2023-09-20
公開日2023-12-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Assembly-mediated activation of the SIR2-HerA supramolecular complex for anti-phage defense.
Mol.Cell, 83, 2023
8FFI
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BU of 8ffi by Molmil
Structure of tetramerized MapSPARTA upon guide RNA-mediated target DNA binding
分子名称: MAGNESIUM ION, TIR-APAZ, guide RNA, ...
著者Shen, Z.F, Yang, X.Y, Fu, T.M.
登録日2022-12-08
公開日2023-08-23
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Oligomerization-mediated activation of a short prokaryotic Argonaute.
Nature, 621, 2023
3V3H
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BU of 3v3h by Molmil
Kinetic and structural studies of thermostabilized mutants of HCA II.
分子名称: CHLORIDE ION, Carbonic anhydrase 2, ZINC ION
著者Boone, C.D, Fisher, S.Z, McKenna, R.
登録日2011-12-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Kinetic and structural characterization of thermostabilized mutants of human carbonic anhydrase II.
Protein Eng.Des.Sel., 25, 2012
3V3I
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BU of 3v3i by Molmil
Kinetic and structural studies of thermostabilized mutants of HCA II.
分子名称: CHLORIDE ION, Carbonic anhydrase 2, ZINC ION
著者Boone, C.D, Fisher, S.Z, McKenna, R.
登録日2011-12-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Kinetic and structural characterization of thermostabilized mutants of human carbonic anhydrase II.
Protein Eng.Des.Sel., 25, 2012
3V3G
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BU of 3v3g by Molmil
Kinetic and structural studies of thermostabilized mutants of HCA II.
分子名称: CHLORIDE ION, Carbonic anhydrase 2, ZINC ION
著者Boone, C.D, Fisher, S.Z, McKenna, R.
登録日2011-12-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.5581 Å)
主引用文献Kinetic and structural characterization of thermostabilized mutants of human carbonic anhydrase II.
Protein Eng.Des.Sel., 25, 2012
3V3J
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BU of 3v3j by Molmil
Kinetic and structural studies of thermostabilized mutants of HCA II.
分子名称: Carbonic anhydrase 2, ZINC ION
著者Boone, C.D, Fisher, S.Z, McKenna, R.
登録日2011-12-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Kinetic and structural characterization of thermostabilized mutants of human carbonic anhydrase II.
Protein Eng.Des.Sel., 25, 2012
3V3F
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BU of 3v3f by Molmil
Kinetic and structural studies of thermostabilized mutants of HCA II.
分子名称: CHLORIDE ION, Carbonic anhydrase 2, ZINC ION
著者Boone, C.D, Fisher, S.Z, McKenna, R.
登録日2011-12-13
公開日2012-06-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetic and structural characterization of thermostabilized mutants of human carbonic anhydrase II.
Protein Eng.Des.Sel., 25, 2012
7LLF
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BU of 7llf by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-83
分子名称: 5-[(azetidin-3-yl)amino]-N-[(1R)-1-{3-[5-({[(1R,3S)-3-hydroxycyclopentyl]amino}methyl)thiophen-2-yl]phenyl}ethyl]-2-methylbenzamide, BORIC ACID, GLYCEROL, ...
著者Ratia, K.M, Xiong, R, Thatcher, G.R.
登録日2021-02-03
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures.
Biorxiv, 2021
7LOS
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BU of 7los by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-65
分子名称: 5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-[[[(3~{R})-oxolan-3-yl]amino]methyl]thiophen-2-yl]phenyl]ethyl]benzamide, CHLORIDE ION, Non-structural protein 3, ...
著者Ratia, K.M, Xiong, R, Thatcher, G.R.
登録日2021-02-10
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures.
Biorxiv, 2021
7LLZ
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BU of 7llz by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-69
分子名称: N-[(1R)-1-(3-{5-[(acetylamino)methyl]thiophen-2-yl}phenyl)ethyl]-5-[(azetidin-3-yl)amino]-2-methylbenzamide, Non-structural protein 3, SULFATE ION, ...
著者Ratia, K.M, Xiong, R, Thatcher, G.R.
登録日2021-02-04
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures.
Biorxiv, 2021
7LBR
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BU of 7lbr by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-89
分子名称: 5-[(azetidin-3-yl)amino]-N-[(1R)-1-{3-[5-({[(1S,3R)-3-hydroxycyclopentyl]amino}methyl)thiophen-2-yl]phenyl}ethyl]-2-methylbenzamide, GLYCEROL, Non-structural protein 3, ...
著者Ratia, K.M, Xiong, R, Thatcher, G.R.
登録日2021-01-08
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures.
Biorxiv, 2021
7LBS
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BU of 7lbs by Molmil
SARS-CoV-2 papain-like protease (PLpro) bound to inhibitor XR8-24
分子名称: 5-[(azetidin-3-yl)amino]-2-methyl-N-[(1R)-1-(3-{5-[(pyrrolidin-1-yl)methyl]thiophen-2-yl}phenyl)ethyl]benzamide, BORIC ACID, GLYCEROL, ...
著者Ratia, K.M, Xiong, R, Thatcher, G.R.
登録日2021-01-08
公開日2021-02-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Potent, Novel SARS-CoV-2 PLpro Inhibitors Block Viral Replication in Monkey and Human Cell Cultures.
Biorxiv, 2021
2LG4
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BU of 2lg4 by Molmil
3D solution structure of antimicrobial peptide aurelin
分子名称: Aurelin
著者Shenkarev, Z, Altukhov, D.
登録日2011-07-20
公開日2012-07-25
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Recombinant expression and solution structure of antimicrobial peptide aurelin from jellyfish Aurelia aurita.
Biochem.Biophys.Res.Commun., 429, 2012
2LJ7
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BU of 2lj7 by Molmil
3D solution structure of plant defensin Lc-def
分子名称: Defensin Lc-def
著者Shenkarev, Z, Mineev, K, Gizatullina, A.
登録日2011-09-07
公開日2012-09-12
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Heterologous expression and solution structure of defensin from lentil Lens culinaris.
Biochem.Biophys.Res.Commun., 451, 2014
4HZ9
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BU of 4hz9 by Molmil
Crystal structure of the type VI native effector-immunity complex Tae3-Tai3 from Ralstonia pickettii
分子名称: Putative cytoplasmic protein, Putative periplasmic protein
著者Dong, C, Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-11-14
公開日2013-08-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the inhibition of type VI effector Tae3 by its immunity protein Tai3
Biochem.J., 454, 2013
8HDL
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BU of 8hdl by Molmil
Crystal structure of ASFV trans geranylgeranyl diphosphate synthase B318L
分子名称: Trans-prenyltransferase
著者Zhao, H.F.
登録日2022-11-04
公開日2023-09-06
実験手法X-RAY DIFFRACTION (3.198 Å)
主引用文献Exploring AlphaFold2's Performance on Predicting Amino Acid Side-Chain Conformations and Its Utility in Crystal Structure Determination of B318L Protein.
Int J Mol Sci, 24, 2023
4HZB
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BU of 4hzb by Molmil
Crystal structure of the type VI SeMet effector-immunity complex Tae3-Tai3 from Ralstonia pickettii
分子名称: Putative cytoplasmic protein, Putative periplasmic protein
著者Dong, C, Zhang, H, Gao, Z.Q, Dong, Y.H.
登録日2012-11-15
公開日2013-08-21
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural insights into the inhibition of type VI effector Tae3 by its immunity protein Tai3
Biochem.J., 454, 2013
7V55
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BU of 7v55 by Molmil
Crystal structure of phospholipase D from Pseudomonas aeruginosa PAO1 using in situ proteolysis
分子名称: CALCIUM ION, Phospholipase D
著者Yang, Y, Li, Z.
登録日2021-08-16
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA.
Nat Commun, 13, 2022
7V53
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BU of 7v53 by Molmil
Crystal structure of full-length phospholipase D from Pseudomonas aeruginosa PAO1
分子名称: Phospholipase D
著者Yang, Y, Li, Z.
登録日2021-08-16
公開日2022-08-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA.
Nat Commun, 13, 2022
7WDK
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BU of 7wdk by Molmil
The structure of PldA-PA3488 complex
分子名称: Phospholipase D, Tli4_C domain-containing protein
著者Zhao, L, Yang, X.Y, Li, Z.Q.
登録日2021-12-21
公開日2022-10-26
最終更新日2022-11-09
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural insights into PA3488-mediated inactivation of Pseudomonas aeruginosa PldA
Nat Commun, 13, 2022
6ZCT
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BU of 6zct by Molmil
Nonstructural protein 10 (nsp10) from SARS CoV-2
分子名称: ZINC ION, nsp10
著者Rogstam, A, Nyblom, M, Christensen, S, Sele, C, Lindvall, T, Rasmussen, A.A, Andre, I, Fisher, S.Z, Knecht, W, Kozielski, F.
登録日2020-06-12
公開日2020-06-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal Structure of Non-Structural Protein 10 from Severe Acute Respiratory Syndrome Coronavirus-2.
Int J Mol Sci, 21, 2020
7CHU
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BU of 7chu by Molmil
Geobacillus virus E2 - ORF18
分子名称: Putative pectin lyase
著者Gong, Y.
登録日2020-07-06
公開日2021-04-14
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.008 Å)
主引用文献Structural and functional characterization of the deep-sea thermophilic bacteriophage GVE2 tailspike protein.
Int.J.Biol.Macromol., 164, 2020
5LRN
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BU of 5lrn by Molmil
Structure of mono-zinc MCR-1 in P21 space group
分子名称: GLYCEROL, Phosphatidylethanolamine transferase Mcr-1, ZINC ION
著者Hinchliffe, P, Paterson, N.G, Spencer, J.
登録日2016-08-19
公開日2016-12-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Insights into the Mechanistic Basis of Plasmid-Mediated Colistin Resistance from Crystal Structures of the Catalytic Domain of MCR-1.
Sci Rep, 7, 2017
3DEZ
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BU of 3dez by Molmil
Crystal structure of Orotate phosphoribosyltransferase from Streptococcus mutans
分子名称: Orotate phosphoribosyltransferase, SULFATE ION
著者Liu, C.P, Gao, Z.Q, Hou, H.F, Li, L.F, Su, X.D, Dong, Y.H.
登録日2008-06-11
公開日2009-06-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of orotate phosphoribosyltransferase from the caries pathogen Streptococcus mutans
Acta Crystallogr.,Sect.F, 66, 2010
6CDP
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BU of 6cdp by Molmil
Vaccine-elicited HIV-1 neutralizing antibody vFP20.01 in complex with HIV-1 fusion peptide residue 512-519
分子名称: HIV-1 fusion peptide 512-519, SULFATE ION, vFP20.01 Fab heavy chain, ...
著者Xu, K, Liu, K, Kwong, P.D.
登録日2018-02-08
公開日2018-05-16
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (2.456 Å)
主引用文献Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
Nat. Med., 24, 2018

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