Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HEX
DownloadVisualize
BU of 8hex by Molmil
C5 portal vertex in HCMV B-capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Major capsid protein, ...
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-11-01
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
5ZNL
DownloadVisualize
BU of 5znl by Molmil
Crystal structure of PDE10A catalytic domain complexed with LHB-6
分子名称: MAGNESIUM ION, N-[2-(7-methoxy-4-morpholin-4-yl-quinazolin-6-yl)oxyethyl]-1,3-benzothiazol-2-amine, ZINC ION, ...
著者Li, Z, Huang, Y, Zhan, C.G, Luo, H.B.
登録日2018-04-09
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Absolute Binding Free Energy Calculation and Design of a Subnanomolar Inhibitor of Phosphodiesterase-10.
J. Med. Chem., 62, 2019
8HEU
DownloadVisualize
BU of 8heu by Molmil
C12 portal in HCMV A-capsid
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-04-26
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
8HEV
DownloadVisualize
BU of 8hev by Molmil
C12 portal in HCMV B-capsid
分子名称: Portal protein, Unknown peptide
著者Li, Z, Yu, X.
登録日2022-11-08
公開日2023-04-26
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Cryo-electron microscopy structures of capsids and in situ portals of DNA-devoid capsids of human cytomegalovirus.
Nat Commun, 14, 2023
7C2C
DownloadVisualize
BU of 7c2c by Molmil
Esterase AlinE4 mutant, D162A
分子名称: ACETATE ION, CADMIUM ION, GLYCEROL, ...
著者Li, Z, Li, J.
登録日2020-05-07
公開日2020-05-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献C-terminal swapped dimers revealed a new catalytic mechanism of SGNH-hydrolase family esterases
To Be Published
8JSI
DownloadVisualize
BU of 8jsi by Molmil
Cryo-EM structure of a DNA-protein complex
分子名称: Argonaute family protein, DNA (5'-D(P*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*C)-3'), DNA (5'-D(P*GP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*T)-3'), ...
著者Li, Z.
登録日2023-06-20
公開日2024-06-26
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Cryo-EM structure of a DNA-protein complex
To Be Published
8KEU
DownloadVisualize
BU of 8keu by Molmil
Crystal Structures of Endo-beta-1,4-xylanase II mutant T2CT28C
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Endo-1,4-beta-xylanase II, IODIDE ION
著者Li, Z.
登録日2023-08-13
公開日2024-08-14
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High resolution crystal structure of xylanase T2CT28C
To Be Published
7BQT
DownloadVisualize
BU of 7bqt by Molmil
Epstein-Barr virus, C12 portal dodecamer
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2020-03-25
公開日2020-09-30
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.8 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BQX
DownloadVisualize
BU of 7bqx by Molmil
Epstein-Barr virus, C5 portal vertex
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2020-03-25
公開日2020-09-30
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BR8
DownloadVisualize
BU of 7br8 by Molmil
Epstein-Barr virus, C5 penton vertex, CATC absent.
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Li, Z, Yu, X.
登録日2020-03-26
公開日2020-09-30
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7BSI
DownloadVisualize
BU of 7bsi by Molmil
Epstein-Barr virus, one asymmetric unit structure of the icosahedral tegumented capsid
分子名称: Major capsid protein, Small capsomere-interacting protein, Triplex capsid protein 1, ...
著者Li, Z, Yu, X.
登録日2020-03-30
公開日2020-09-30
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7DPO
DownloadVisualize
BU of 7dpo by Molmil
Crystal Structure of BRD2(BD2)with Ligand ZB-BD-224 bound
分子名称: 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4,5-dihydro-2,3a1,5-triazadibenzo[cd,h]azulen-1(2H)-one, Bromodomain-containing protein 2
著者Li, Z, Lu, T, Chen, P, Luo, C, Zhou, B.
登録日2020-12-21
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29994035 Å)
主引用文献Structure Base Design of A new chemotype of Four-Cycle Compounds as Bromodomain and Extra-Terminal (BET) Inhibitors with The Second Bromodomain Bias and Highly Anti-inflammatory Potency
To Be Published
7DPN
DownloadVisualize
BU of 7dpn by Molmil
Crystal structure of BRD2(BD1)with ligand ZB-BD-224 bound
分子名称: 5-(1-naphthoyl)-11-methyl-8-((methylsulfonyl)methyl)-4,5-dihydro-2,3a1,5-triazadibenzo[cd,h]azulen-1(2H)-one, Bromodomain-containing protein 2
著者Li, Z, Lu, T, Chen, P, Luo, C, Zhou, B.
登録日2020-12-20
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79998839 Å)
主引用文献Structure Base Design of A new chemotype of Four-Cycle Compounds as Bromodomain and Extra-Terminal (BET) Inhibitors with The Second Bromodomain Bias and Highly Anti-inflammatory Potency
To Be Published
7BR7
DownloadVisualize
BU of 7br7 by Molmil
Epstein-Barr virus, C1 portal-proximal penton vertex, CATC binding
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2020-03-26
公開日2020-09-30
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献CryoEM structure of the tegumented capsid of Epstein-Barr virus.
Cell Res., 30, 2020
7EFS
DownloadVisualize
BU of 7efs by Molmil
Fructose-bisphosphate aldolase in Artemisia sieversiana pollen
分子名称: Fructose-bisphosphate aldolase
著者Li, Z, Wei, C, Ji Fu, W, Zhi Qiang, X.
登録日2021-03-23
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Identification of fructose-bisphosphate aldose as a novel type of major allergen from Artemisia pollen
To Be Published
7ETJ
DownloadVisualize
BU of 7etj by Molmil
C5 portal vertex in the partially-enveloped virion capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2021-05-13
公開日2021-07-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ET2
DownloadVisualize
BU of 7et2 by Molmil
Human Cytomegalovirus, C12 portal
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2021-05-12
公開日2021-07-14
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ETM
DownloadVisualize
BU of 7etm by Molmil
C6 portal vertex in the enveloped virion capsid
分子名称: Portal protein
著者Li, Z, Yu, X.
登録日2021-05-13
公開日2021-07-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ETO
DownloadVisualize
BU of 7eto by Molmil
C1 CVSC-binding penton vertex in the virion capsid of Human Cytomegalovirus
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2021-05-13
公開日2021-07-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
7ET3
DownloadVisualize
BU of 7et3 by Molmil
C5 portal vertex in the enveloped virion capsid
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Li, Z, Yu, X.
登録日2021-05-12
公開日2021-07-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural basis for genome packaging, retention, and ejection in human cytomegalovirus.
Nat Commun, 12, 2021
5K08
DownloadVisualize
BU of 5k08 by Molmil
RecA mini intein-Zeise's salt complex
分子名称: 3,3',3''-phosphanetriyltripropanoic acid, RecA mini intein, SULFATE ION, ...
著者Li, Z, Li, H.M.
登録日2016-05-17
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献Structural insights into protein splicing inhibition by platinum therapeutics as potential anti-microbials
To be published
8I3S
DownloadVisualize
BU of 8i3s by Molmil
Local CryoEM structure of the SARS-CoV-2 S6P in complex with 7B3 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain od Fab 7B3, Light chain of Fab 7B3, ...
著者Li, Z, Yu, F, Cao, S, ZHao, H.
登録日2023-01-17
公開日2023-10-04
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Broadly neutralizing antibodies derived from the earliest COVID-19 convalescents protect mice from SARS-CoV-2 variants challenge.
Signal Transduct Target Ther, 8, 2023
8I3U
DownloadVisualize
BU of 8i3u by Molmil
Local CryoEM structure of the SARS-CoV-2 S6P in complex with 14B1 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of Fab 14B1, Light chain of Fab 14B1, ...
著者Li, Z, Yu, F, Cao, S.
登録日2023-01-18
公開日2023-10-04
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Broadly neutralizing antibodies derived from the earliest COVID-19 convalescents protect mice from SARS-CoV-2 variants challenge.
Signal Transduct Target Ther, 8, 2023
6OWU
DownloadVisualize
BU of 6owu by Molmil
THE PRP8 INTEIN OF CRYPTOCOCCUS NEOFORMANS in complex with Zn2+
分子名称: PRP8 protein, ZINC ION
著者Li, Z, Li, H.
登録日2019-05-11
公開日2019-10-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Spliceosomal Prp8 intein at the crossroads of protein and RNA splicing.
Plos Biol., 17, 2019
3LWE
DownloadVisualize
BU of 3lwe by Molmil
The crystal structure of MPP8
分子名称: M-phase phosphoprotein 8
著者Li, Z, Li, Z, Ruan, J, Xu, C, Tong, Y, Pan, P.W, Tempel, W, Crombet, L, Min, J, Zang, J, Structural Genomics Consortium (SGC)
登録日2010-02-23
公開日2010-03-02
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for specific binding of human MPP8 chromodomain to histone H3 methylated at lysine 9.
Plos One, 6, 2011

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon