Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8SPP
DownloadVisualize
BU of 8spp by Molmil
Crystal structure of a heme enzyme RufO in rufomycin biosynthesis
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Wang, Y, Jordan, S, Li, B.
登録日2023-05-03
公開日2023-08-23
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural and spectroscopic characterization of RufO indicates a new biological role in rufomycin biosynthesis.
J.Biol.Chem., 299, 2023
4BBQ
DownloadVisualize
BU of 4bbq by Molmil
Crystal structure of the CXXC and PHD domain of Human Lysine-specific Demethylase 2A (KDM2A)(FBXL11)
分子名称: 1,2-ETHANEDIOL, LYSINE-SPECIFIC DEMETHYLASE 2A, ZINC ION
著者Allerston, C.K, Watson, A.A, Edlich, C, Li, B, Chen, Y, Ball, L, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Laue, E.D, Gileadi, O.
登録日2012-09-27
公開日2012-10-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal Structure of the Cxxc and Phd Domain of Human Lysine-Specific Demethylase 2A (Kdm2A)(Fbxl11)
To be Published
7F57
DownloadVisualize
BU of 7f57 by Molmil
Kainate-bound GluK2-1xNeto2 complex, at the desensitized state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
著者He, L.L, Gao, Y.W, Li, B, Zhao, Y.
登録日2021-06-21
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F56
DownloadVisualize
BU of 7f56 by Molmil
DNQX-bound GluK2-1xNeto2 complex, with asymmetric LBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
著者He, L.L, Gao, Y.W, Li, B, Zhao, Y.
登録日2021-06-21
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F5A
DownloadVisualize
BU of 7f5a by Molmil
DNQX-bound GluK2-2xNeto2 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, kainate 2, ...
著者He, L.L, Gao, Y.W, Li, B, Zhao, Y.
登録日2021-06-21
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F59
DownloadVisualize
BU of 7f59 by Molmil
DNQX-bound GluK2-1xNeto2 complex
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor ionotropic, ...
著者He, L.L, Gao, Y.W, Li, B, Zhao, Y.
登録日2021-06-21
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Kainate receptor modulation by NETO2.
Nature, 599, 2021
7F5B
DownloadVisualize
BU of 7f5b by Molmil
LBD-TMD focused reconstruction of DNQX-bound GluK2-1xNeto2 complex
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者He, L.L, Gao, Y.W, Li, B, Zhao, Y.
登録日2021-06-21
公開日2021-09-29
最終更新日2021-12-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Kainate receptor modulation by NETO2.
Nature, 599, 2021
8K4I
DownloadVisualize
BU of 8k4i by Molmil
Crystal structure of YajQ STM0435
分子名称: YajQ
著者Dai, Y, Zhang, M, Wang, W, Li, B.
登録日2023-07-19
公開日2024-04-17
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献A c-di-GMP binding effector STM0435 modulates flagellar motility and pathogenicity in Salmonella
Virulence, 15, 2024
8K5Q
DownloadVisualize
BU of 8k5q by Molmil
Crystal structure of YajQ STM0435 with c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), YajQ
著者Dai, Y, Zhang, M, Wang, W, Li, B.
登録日2023-07-23
公開日2024-04-17
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献A c-di-GMP binding effector STM0435 modulates flagellar motility and pathogenicity in Salmonella
Virulence, 15, 2024
3SFV
DownloadVisualize
BU of 3sfv by Molmil
Crystal structure of the GDP-bound Rab1a S25N mutant in complex with the coiled-coil domain of LidA from Legionella pneumophila
分子名称: GUANOSINE-5'-DIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
著者Yin, K, Lu, D, Zhu, D, Zhang, H, Li, B, Xu, S, Gu, L.
登録日2011-06-14
公開日2012-04-18
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural Insights into a Unique Legionella pneumophila Effector LidA Recognizing Both GDP and GTP Bound Rab1 in Their Active State
Plos Pathog., 8, 2012
4PT6
DownloadVisualize
BU of 4pt6 by Molmil
The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
分子名称: Coagulation factor VIII
著者Kym, G, Shi, K, Kamajaya, A, Hamdouche, S, Kostecki, J.S, Wannier, T, Li, B, Nikolovski, P, Mayo, S.L.
登録日2014-03-10
公開日2015-04-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The discobody: an engineered discoidin domain from factor VIII that binds v 3 integrin with antibody-like affinities
To be Published
4REY
DownloadVisualize
BU of 4rey by Molmil
Crystal Structure of the GRASP65-GM130 C-terminal peptide complex
分子名称: Golgi reassembly-stacking protein 1, Golgin subfamily A member 2, SULFATE ION
著者Shi, N, Hu, F, Li, B.
登録日2014-09-24
公開日2015-09-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural Basis for the Interaction between the Golgi Reassembly-stacking Protein GRASP65 and the Golgi Matrix Protein GM130.
J.Biol.Chem., 290, 2015
3TKL
DownloadVisualize
BU of 3tkl by Molmil
Crystal structure of the GTP-bound Rab1a in complex with the coiled-coil domain of LidA from Legionella pneumophila
分子名称: GUANOSINE-5'-TRIPHOSPHATE, LidA protein, substrate of the Dot/Icm system, ...
著者Cheng, W, Yin, K, Lu, D, Li, B, Zhu, D, Chen, Y, Zhang, H, Xu, S, Chai, J, Gu, L.
登録日2011-08-27
公開日2012-06-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.183 Å)
主引用文献Structural insights into a unique Legionella pneumophila effector LidA recognizing both GDP and GTP bound Rab1 in their active state
Plos Pathog., 8, 2012
8JBI
DownloadVisualize
BU of 8jbi by Molmil
SteC 202-375 mutant- C276S
分子名称: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Secreted effector kinase SteC
著者Zhang, M, Dai, Y, Li, B.
登録日2023-05-09
公開日2024-02-28
実験手法X-RAY DIFFRACTION (2.356 Å)
主引用文献Salmonella manipulates macrophage cytoskeleton to penetrate gut-vascular barrier and promote dissemination during infection
To Be Published
4LMQ
DownloadVisualize
BU of 4lmq by Molmil
Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12
分子名称: Stromal cell-derived factor 1, hu30D8 Fab heavy chain, hu30D8 Fab light chain
著者Zhong, Z, Wang, J, Li, B, Xiang, H, Ultsch, M, Coons, M, Wong, T, Chiang, N.Y, Clark, S, Clark, R, Quintana, L, Gribling, P, Suto, E, Barck, K, Corpuz, R, Yao, J, Takkar, R, Lee, W.P, Damico-Beyer, L.A, Carano, R.D, Adams, C, Kelley, R.F, Wang, W, Ferrara, N.
登録日2013-07-10
公開日2013-08-14
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.773 Å)
主引用文献Development and Preclinical Characterization of a Humanized Antibody Targeting CXCL12.
Clin.Cancer Res., 19, 2013
7DSV
DownloadVisualize
BU of 7dsv by Molmil
Structure of a human NHE1-CHP1 complex under pH 6.5
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Calcineurin B homologous protein 1, Sodium/hydrogen exchanger 1
著者Dong, Y, Gao, Y, Li, B, Zhang, X.C, Zhao, Y.
登録日2021-01-03
公開日2021-06-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and mechanism of the human NHE1-CHP1 complex.
Nat Commun, 12, 2021
7DSW
DownloadVisualize
BU of 7dsw by Molmil
Structure of a human NHE1-CHP1 complex under pH 7.5
分子名称: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, Sodium/hydrogen exchanger 1
著者Dong, Y, Gao, Y, Li, B, Zhang, X.C, Zhao, Y.
登録日2021-01-03
公開日2021-06-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure and mechanism of the human NHE1-CHP1 complex.
Nat Commun, 12, 2021
7DSX
DownloadVisualize
BU of 7dsx by Molmil
Structure of a human NHE1-CHP1 complex under pH 7.5, bound by cariporide
分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, Calcineurin B homologous protein 1, N-[bis(azanyl)methylidene]-3-methylsulfonyl-4-propan-2-yl-benzamide, ...
著者Dong, Y, Gao, Y, Li, B, Zhang, X.C, Zhao, Y.
登録日2021-01-03
公開日2021-06-23
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structure and mechanism of the human NHE1-CHP1 complex.
Nat Commun, 12, 2021
7D7E
DownloadVisualize
BU of 7d7e by Molmil
Structure of PKD1L3-CTD/PKD2L1 in apo state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Polycystic kidney disease 2-like 1 protein, ...
著者Su, Q, Chen, M, Li, B, Wang, Y, Jing, D, Zhan, X, Yu, Y, Shi, Y.
登録日2020-10-03
公開日2021-08-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis for Ca 2+ activation of the heteromeric PKD1L3/PKD2L1 channel.
Nat Commun, 12, 2021
7W72
DownloadVisualize
BU of 7w72 by Molmil
Structure of a human glycosylphosphatidylinositol (GPI) transamidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, GPI transamidase component PIG-S, ...
著者Zhang, H, Su, J, Li, B, Gao, Y, Zhang, X.C, Zhao, Y.
登録日2021-12-02
公開日2022-02-16
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of human glycosylphosphatidylinositol transamidase.
Nat.Struct.Mol.Biol., 29, 2022
2G0D
DownloadVisualize
BU of 2g0d by Molmil
Nisin cyclase
分子名称: Nisin biosynthesis protein nisC, ZINC ION
著者Nair, S.K.
登録日2006-02-12
公開日2006-05-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Structure and mechanism of the lantibiotic cyclase involved in nisin biosynthesis
Science, 311, 2006
2G02
DownloadVisualize
BU of 2g02 by Molmil
Nisin cyclase
分子名称: Nisin biosynthesis protein nisC, ZINC ION
著者Nair, S.K.
登録日2006-02-10
公開日2006-05-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure and Mechanism of the Lantibiotic Cyclase Involved in Nisin Biosynthesis
Science, 311, 2006
5U8T
DownloadVisualize
BU of 5u8t by Molmil
Structure of Eukaryotic CMG Helicase at a Replication Fork and Implications
分子名称: Cell division control protein 45, DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA replication complex GINS protein PSF1, ...
著者Li, B, Georgescu, R, Yuan, Z, Santos, R, Sun, J, Zhang, D, Yurieva, O, Li, H, O'Donnell, M.E.
登録日2016-12-15
公開日2017-02-08
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7KH2
DownloadVisualize
BU of 7kh2 by Molmil
Structure of N-citrylornithine decarboxylase bound with PLP
分子名称: GLYCEROL, N-citrylornithine decarboxylase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Deng, X, Tomchick, D, Phillips, M, Michael, A.
登録日2020-10-19
公開日2020-12-16
最終更新日2021-07-28
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Alternative pathways utilize or circumvent putrescine for biosynthesis of putrescine-containing rhizoferrin.
J.Biol.Chem., 296, 2020
2H9G
DownloadVisualize
BU of 2h9g by Molmil
Crystal structure of phage derived Fab BdF1 with human Death Receptor 5 (DR5)
分子名称: Fab BdF1, heavy chain, light chain, ...
著者Hymowitz, S.G, Compaan, D.M.
登録日2006-06-09
公開日2006-08-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献Activation of the Proapoptotic Death Receptor DR5 by Oligomeric Peptide and Antibody Agonists.
J.Mol.Biol., 361, 2006

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon