Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5OD9
DownloadVisualize
BU of 5od9 by Molmil
Structure of the engineered metalloesterase MID1sc9
分子名称: (2~{S})-2-phenylpropanoic acid, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Studer, S, Mittl, P.R.E, Hilvert, D.
登録日2017-07-05
公開日2018-12-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Evolution of a highly active and enantiospecific metalloenzyme from short peptides.
Science, 362, 2018
7K4P
DownloadVisualize
BU of 7k4p by Molmil
Crystal structure of Kemp Eliminase HG3
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4S
DownloadVisualize
BU of 7k4s by Molmil
Crystal structure of Kemp Eliminase HG3.7
分子名称: Endo-1,4-beta-xylanase, SULFATE ION
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4Z
DownloadVisualize
BU of 7k4z by Molmil
Crystal structure of Kemp Eliminase HG3.17 in complex with the transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, Endo-1,4-beta-xylanase, PENTAETHYLENE GLYCOL
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4Q
DownloadVisualize
BU of 7k4q by Molmil
Crystal structure of Kemp Eliminase HG3 in complex with the transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, Endo-1,4-beta-xylanase, SULFATE ION
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4V
DownloadVisualize
BU of 7k4v by Molmil
Crystal structure of Kemp Eliminase HG3.17
分子名称: Endo-1,4-beta-xylanase, TETRAETHYLENE GLYCOL
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4R
DownloadVisualize
BU of 7k4r by Molmil
Crystal structure of Kemp Eliminase HG3 K50Q
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4T
DownloadVisualize
BU of 7k4t by Molmil
Crystal structure of Kemp Eliminase HG3.17
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.999 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4X
DownloadVisualize
BU of 7k4x by Molmil
Crystal structure of Kemp Eliminase HG3.7 in complex with the transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, ACETATE ION, Endo-1,4-beta-xylanase, ...
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4Y
DownloadVisualize
BU of 7k4y by Molmil
Crystal structure of Kemp Eliminase HG3.17 at 343 K
分子名称: Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4U
DownloadVisualize
BU of 7k4u by Molmil
Crystal structure of Kemp Eliminase HG3 K50Q in complex with the transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7K4W
DownloadVisualize
BU of 7k4w by Molmil
Crystal structure of Kemp Eliminase HG3.17 in the inactive state
分子名称: CALCIUM ION, Endo-1,4-beta-xylanase
著者Padua, R.A.P, Otten, R, Bunzel, A, Nguyen, V, Pitsawong, W, Patterson, M, Sui, S, Perry, S.L, Cohen, A.E, Hilvert, D, Kern, D.
登録日2020-09-16
公開日2020-12-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献How directed evolution reshapes the energy landscape in an enzyme to boost catalysis.
Science, 370, 2020
7LGQ
DownloadVisualize
BU of 7lgq by Molmil
Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ATP and 8x(Asp-Arg)-Asn
分子名称: 8x(Asp-Arg)-Asn, ADENOSINE-5'-TRIPHOSPHATE, Cyanophycin synthase, ...
著者Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
登録日2021-01-20
公開日2021-08-18
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
7LGJ
DownloadVisualize
BU of 7lgj by Molmil
Cyanophycin synthetase 1 from Synechocystis sp. UTEX2470 with ADPCP and 8x(Asp-Arg)-NH2
分子名称: 8x(Asp-Arg)-NH2, Cyanophycin synthase, MAGNESIUM ION, ...
著者Sharon, I, Grogg, M, Hilvert, D, Schmeing, T.M.
登録日2021-01-20
公開日2021-08-18
最終更新日2021-10-06
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structures and function of the amino acid polymerase cyanophycin synthetase.
Nat.Chem.Biol., 17, 2021
5OJ9
DownloadVisualize
BU of 5oj9 by Molmil
Structure of Mb NMH
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Hayashi, T, Pott, M, Mori, T, Mittl, P, Green, A, Hivert, D.
登録日2017-07-21
公開日2018-01-24
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.483 Å)
主引用文献A Noncanonical Proximal Heme Ligand Affords an Efficient Peroxidase in a Globin Fold.
J. Am. Chem. Soc., 140, 2018
8RD5
DownloadVisualize
BU of 8rd5 by Molmil
Crystal structure of Kemp Eliminase HG3.R5 with bound transition state analog 6-nitrobenzotriazole
分子名称: 6-NITROBENZOTRIAZOLE, ACETATE ION, Endo-1,4-beta-xylanase, ...
著者Schaub, D, Schwander, T, Hueppi, S, Buller, R.M.
登録日2023-12-07
公開日2024-09-04
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Enriching productive mutational paths accelerates enzyme evolution.
Nat.Chem.Biol., 2024
3B5L
DownloadVisualize
BU of 3b5l by Molmil
Crystal Structure of a Novel Engineered Retroaldolase: RA-61
分子名称: AMMONIUM ION, Endoxylanase, SULFATE ION
著者Stoddard, B.L, Doyle, L.A.
登録日2007-10-26
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献De novo computational design of retro-aldol enzymes.
Science, 319, 2008
6WVS
DownloadVisualize
BU of 6wvs by Molmil
Hyperstable de novo TIM barrel variant DeNovoTIM15
分子名称: DeNovoTIM15 hyperstable de novo TIM barrel
著者Bick, M.J, Haydon, I.C, Caldwell, S.J, Zeymer, C, Huang, P, Fernandez-Velasco, D.A, Baker, D.
登録日2020-05-06
公開日2020-11-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion.
Proc.Natl.Acad.Sci.USA, 117, 2020
3HOJ
DownloadVisualize
BU of 3hoj by Molmil
Crystal Structure of a Novel Engineered Retroaldolase: RA-22
分子名称: RETROALDOLASE-22
著者Stoddard, B.L, Doyle, L.A.
登録日2009-06-02
公開日2009-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献De Novo Computational Design of Retro-Aldol Enzymes
Science, 319, 2008
3I1C
DownloadVisualize
BU of 3i1c by Molmil
Crystal Structure of a Novel Engineered Diels-Alderase: DA_20_00_A74I
分子名称: Diisopropyl-fluorophosphatase, GLYCEROL
著者Lambert, A.R, Stoddard, B.L.
登録日2009-06-26
公開日2009-08-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction.
Science, 329, 2010
1Y0L
DownloadVisualize
BU of 1y0l by Molmil
Catalytic elimination antibody 34E4 in complex with hapten
分子名称: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic Antibody Fab 34E4 Heavy chain, ...
著者Debler, E.W, Ito, S, Heine, A, Wilson, I.A.
登録日2004-11-15
公開日2005-04-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural origins of efficient proton abstraction from carbon by a catalytic antibody
Proc.Natl.Acad.Sci.USA, 102, 2005
1Y18
DownloadVisualize
BU of 1y18 by Molmil
Fab fragment of catalytic elimination antibody 34E4 E(H50)D mutant in complex with hapten
分子名称: 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID, CHLORIDE ION, Catalytic antibody 34E4 heavy chain, ...
著者Debler, E.W, Ito, S, Heine, A, Wilson, I.A.
登録日2004-11-17
公開日2005-04-05
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural origins of efficient proton abstraction from carbon by a catalytic antibody
Proc.Natl.Acad.Sci.USA, 102, 2005
7UQV
DownloadVisualize
BU of 7uqv by Molmil
Pseudobacteroides cellulosolvens pseudo-CphB
分子名称: Cyanophycinase
著者Sharon, I, Schmeing, T.M.
登録日2022-04-20
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of cyanophycinase in complex with a cyanophycin degradation intermediate.
Biochim Biophys Acta Gen Subj, 1866, 2022
7UQW
DownloadVisualize
BU of 7uqw by Molmil
PCC6803 Cyanophycinase S132DAP covalently bound to cyanophycin dimer
分子名称: (2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid, Cyanophycinase, FORMAMIDE, ...
著者Sharon, I, Schmeing, T.M.
登録日2022-04-20
公開日2022-08-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of cyanophycinase in complex with a cyanophycin degradation intermediate.
Biochim Biophys Acta Gen Subj, 1866, 2022
3O6Y
DownloadVisualize
BU of 3o6y by Molmil
Robust computational design, optimization, and structural characterization of retroaldol enzymes
分子名称: Retro-Aldolase, SULFATE ION
著者Althoff, E.A, Wang, L, Jiang, L, Moody, J, Bolduc, J, Lassila, J.K, Wang, Z.Z, Smith, M, Hari, S, Herschlag, D, Stoddard, B.L, Baker, D.
登録日2010-07-29
公開日2011-06-29
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Structural analyses of covalent enzyme-substrate analog complexes reveal strengths and limitations of de novo enzyme design.
J.Mol.Biol., 415, 2012

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon