Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8RF6
DownloadVisualize
BU of 8rf6 by Molmil
Crystal structure of N-terminal SARS-CoV-2 nsp1 in complex with fragment hit 11A7_AL5 refined against the anomalous diffraction data
分子名称: 6-iodanyl-2,3-dihydro-1,3-benzothiazol-2-amine, Host translation inhibitor nsp1
著者Ma, S, Damfo, S, Mykhaylyk, V, Kozielski, F.
登録日2023-12-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献High-confidence placement of low-occupancy fragments into electron density using the anomalous signal of sulfur and halogen atoms.
Acta Crystallogr D Struct Biol, 80, 2024
8RFD
DownloadVisualize
BU of 8rfd by Molmil
Crystal structure of N-terminal SARS-CoV-2 nsp1 in complex with fragment hit 7H2_AL2 refined against the anomalous diffraction data
分子名称: (1~{R})-1-(4-iodophenyl)ethanamine, Host translation inhibitor nsp1
著者Ma, S, Damfo, S, Mykhaylyk, V, Kozielski, F.
登録日2023-12-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献High-confidence placement of low-occupancy fragments into electron density using the anomalous signal of sulfur and halogen atoms.
Acta Crystallogr D Struct Biol, 80, 2024
8RF3
DownloadVisualize
BU of 8rf3 by Molmil
Crystal structure of N-terminal SARS-CoV-2 nsp1 in complex with fragment hit 7G3 refined against the anomalous diffraction data
分子名称: 2-(1-benzothiophen-3-yl)ethanoic acid, Host translation inhibitor nsp1
著者Ma, S, Damfo, S, Mykhaylyk, V, Kozielski, F.
登録日2023-12-12
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献High-confidence placement of low-occupancy fragments into electron density using the anomalous signal of sulfur and halogen atoms.
Acta Crystallogr D Struct Biol, 80, 2024
5ZMC
DownloadVisualize
BU of 5zmc by Molmil
Structural Basis for Reactivation of -146C>T Mutant TERT Promoter by cooperative binding of p52 and ETS1/2
分子名称: DNA (5'-D(P*CP*GP*GP*GP*GP*AP*CP*CP*CP*GP*GP*AP*AP*GP*GP*G)-3'), DNA (5'-D(P*GP*CP*CP*CP*TP*TP*CP*CP*GP*GP*GP*TP*CP*CP*CP*C)-3'), Nuclear factor NF-kappa-B p100 subunit, ...
著者Xu, X, Bharath, S.R, Song, H.
登録日2018-04-02
公開日2018-09-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural basis for reactivating the mutant TERT promoter by cooperative binding of p52 and ETS1.
Nat Commun, 9, 2018
7BNV
DownloadVisualize
BU of 7bnv by Molmil
Crystal Structure of the SARS-CoV-2 Receptor Binding Domain in Complex with Antibody ION-300
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain, Light Chain, ...
著者Hall, G, Cowan, R, Carr, M.
登録日2021-01-22
公開日2021-11-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Cross-Reactive SARS-CoV-2 Neutralizing Antibodies From Deep Mining of Early Patient Responses.
Front Immunol, 12, 2021
7X0F
DownloadVisualize
BU of 7x0f by Molmil
Structure of Pseudomonas NRPS protein, AmbB-TC bound to Ppant
分子名称: 4'-PHOSPHOPANTETHEINE, AMB antimetabolite synthase AmbB
著者ChuYuanKee, M, Bharath, S.R, Song, H.
登録日2022-02-22
公開日2022-06-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural insights into the substrate-bound condensation domains of non-ribosomal peptide synthetase AmbB.
Sci Rep, 12, 2022
7X0E
DownloadVisualize
BU of 7x0e by Molmil
Structure of Pseudomonas NRPS protein, AmbB-TC in apo form
分子名称: AMB antimetabolite synthase AmbB, N-methyl-N-[(2S,3R,4R,5R)-2,3,4,5,6-pentakis(oxidanyl)hexyl]nonanamide
著者ChuYuanKee, M, Bharath, S.R, Song, H.
登録日2022-02-22
公開日2022-07-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the substrate-bound condensation domains of non-ribosomal peptide synthetase AmbB.
Sci Rep, 12, 2022
7X17
DownloadVisualize
BU of 7x17 by Molmil
Structure of Pseudomonas NRPS protein, AmbB-TC bound to Ppant-L-Ala
分子名称: AMB antimetabolite synthase AmbB, S-[2-[3-[[(2S)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (2R)-2-azanylpropanethioate
著者ChuYuanKee, M, Bharath, S.R, Song, H.
登録日2022-02-23
公開日2022-07-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the substrate-bound condensation domains of non-ribosomal peptide synthetase AmbB.
Sci Rep, 12, 2022
5JXE
DownloadVisualize
BU of 5jxe by Molmil
Human PD-1 ectodomain complexed with Pembrolizumab Fab
分子名称: Pembrolizumab Fab heavy chain, Pembrolizumab Fab light chain, Programmed cell death protein 1
著者Na, Z, Bharath, S.R, Song, H.
登録日2016-05-13
公開日2016-08-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for blocking PD-1-mediated immune suppression by therapeutic antibody pembrolizumab.
Cell Res., 27, 2017
6SBI
DownloadVisualize
BU of 6sbi by Molmil
X-ray structure of murine Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Rupp, B, Naschberger, A, Weiss, A.K.H.
登録日2019-07-21
公開日2020-03-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
6SBJ
DownloadVisualize
BU of 6sbj by Molmil
X-ray structure of mus musculus Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) apo-form uuncomplexed
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Rupp, B, Naschberger, A, Weiss, A.K.H.
登録日2019-07-21
公開日2020-02-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Structural and functional comparison of fumarylacetoacetate domain containing protein 1 in human and mouse.
Biosci.Rep., 40, 2020
5H3U
DownloadVisualize
BU of 5h3u by Molmil
Sm RNA bound to GEMIN5-WD
分子名称: GLYCEROL, Gem-associated protein 5, RNA (5'-R(*AP*AP*UP*UP*UP*UP*UP*GP*AP*C)-3')
著者Bharath, S.R, Tang, X, Song, H.
登録日2016-10-27
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structural basis for specific recognition of pre-snRNA by Gemin5
Cell Res., 26, 2016
5H3T
DownloadVisualize
BU of 5h3t by Molmil
m7G cap bound to GEMIN5-WD
分子名称: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE, GLYCEROL, Gem-associated protein 5
著者Bharath, S.R, Tang, X, Song, H.
登録日2016-10-27
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.571 Å)
主引用文献Structural basis for specific recognition of pre-snRNA by Gemin5
Cell Res., 26, 2016
5H3S
DownloadVisualize
BU of 5h3s by Molmil
apo form of GEMIN5-WD
分子名称: GLYCEROL, Gem-associated protein 5
著者Bharath, S.R, Tang, X, Song, H.
登録日2016-10-27
公開日2016-12-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for specific recognition of pre-snRNA by Gemin5
Cell Res., 26, 2016
6FFT
DownloadVisualize
BU of 6fft by Molmil
Neutron structure of human transthyretin (TTR) S52P mutant in complex with tafamidis at room temperature to 2A resolution (quasi-Laue)
分子名称: 2-(3,5-dichlorophenyl)-1,3-benzoxazole-6-carboxylic acid, Transthyretin
著者Yee, A.W, Moulin, M, Blakeley, M.P, Haertlein, M, Mitchell, E.P, Forsyth, V.T.
登録日2018-01-09
公開日2019-01-02
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
主引用文献A molecular mechanism for transthyretin amyloidogenesis.
Nat Commun, 10, 2019
6FOG
DownloadVisualize
BU of 6fog by Molmil
X-ray structure of homo sapiens Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) in complex with inhibitor oxalate at 1.94A resolution.
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Naschberger, A, Weiss, A.K.H.
登録日2018-02-07
公開日2018-11-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural basis for the bi-functionality of human oxaloacetate decarboxylase FAHD1.
Biochem. J., 475, 2018
6FOH
DownloadVisualize
BU of 6foh by Molmil
X-ray structure of homo sapiens Fumarylacetoacetate hydrolase domain containing protein 1 (FAHD1) at 1.56A resolution.
分子名称: Acylpyruvase FAHD1, mitochondrial, CHLORIDE ION, ...
著者Naschberger, A, Weiss, A.K.H.
登録日2018-02-07
公開日2018-11-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural basis for the bi-functionality of human oxaloacetate decarboxylase FAHD1.
Biochem. J., 475, 2018
5DMQ
DownloadVisualize
BU of 5dmq by Molmil
Crystal structure of mouse eRF1 in complex with Reverse Transcriptase (RT) of Moloney Murine Leukemia Virus
分子名称: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
著者Tang, T, Song, H.
登録日2015-09-09
公開日2016-07-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (4 Å)
主引用文献Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
5DMR
DownloadVisualize
BU of 5dmr by Molmil
Crystal Structure of C-terminal domain of mouse eRF1 in complex with RNase H domain of RT of Moloney Murine Leukemia Virus
分子名称: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
著者Tang, X, Song, H.
登録日2015-09-09
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
4B3F
DownloadVisualize
BU of 4b3f by Molmil
crystal structure of Ighmbp2 helicase
分子名称: DNA-BINDING PROTEIN SMUBP-2, PHOSPHATE ION
著者Lim, S.C, Song, H.
登録日2012-07-24
公開日2012-09-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Ighmbp2 Helicase Structure Reveals the Molecular Basis for Disease-Causing Mutations in Dmsa1.
Nucleic Acids Res., 40, 2012
4Z4R
DownloadVisualize
BU of 4z4r by Molmil
Crystal structure of GII.10 P domain in complex with 300mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, beta-L-fucopyranose
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
4Z4T
DownloadVisualize
BU of 4z4t by Molmil
Crystal structure of GII.10 P domain in complex with 75mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, NITRATE ION, ...
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
4Z4W
DownloadVisualize
BU of 4z4w by Molmil
Crystal structure of GII.10 P domain in complex with 4.7mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, beta-L-fucopyranose
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
4Z4Y
DownloadVisualize
BU of 4z4y by Molmil
Crystal structure of GII.10 P domain in complex with 7.5mM B antigen (trisaccharide)
分子名称: 1,2-ETHANEDIOL, Capsid protein, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Leuthold, M.M, Koromyslova, A.D, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
4Z4Z
DownloadVisualize
BU of 4z4z by Molmil
Crystal structure of GII.10 P domain in complex with 30mM B antigen (trisaccharide)
分子名称: 1,2-ETHANEDIOL, Capsid protein, alpha-L-fucopyranose-(1-2)-[alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Leuthold, M.M, Koromyslova, A.D, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon