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8S3O
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BU of 8s3o by Molmil
Structure of native human CD109
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD109 antigen
著者Almeida, V.A, Andersen, G.R.
登録日2024-02-20
公開日2025-03-05
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Structure of native human CD109
To Be Published
7NOZ
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BU of 7noz by Molmil
Structure of the nanobody stablized properdin bound alternative pathway proconvertase C3b:FB:FP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3 alpha chain, Complement C3 beta chain, ...
著者Lorenzen, J, Pedersen, D.V, Andersen, G.R.
登録日2021-02-26
公開日2022-07-27
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structure determination of an unstable macromolecular complex enabled by nanobody-peptide bridging.
Protein Sci., 31, 2022
9FX2
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BU of 9fx2 by Molmil
Structure of methylamine activated CD109
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD109 antigen
著者Almeida, A.V, Andersen, G.R.
登録日2024-07-01
公開日2025-03-19
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structure of methylamine activated CD109
To Be Published
9FX3
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BU of 9fx3 by Molmil
Structure of active human CD109
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CD109 antigen
著者Almeida, A.V, Andersen, G.R.
登録日2024-07-01
公開日2025-03-19
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of active human CD109
To Be Published
4P3A
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BU of 4p3a by Molmil
Crystal structure of the mouse C5a anaphylatoxin
分子名称: Complement C5, FORMIC ACID
著者Yatime, L, Schatz-Jakobsen, J.A, Andersen, G.R.
登録日2014-03-06
公開日2014-06-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and functional characterization of human and murine C5a anaphylatoxins.
Acta Crystallogr. D Biol. Crystallogr., 70, 2014
4P39
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BU of 4p39 by Molmil
Crystal structure of the human C5aR antagonist C5a-A8
分子名称: Complement C5
著者Yatime, L, Schatz-Jakobsen, J.A, Larsen, C, Andersen, G.R.
登録日2014-03-06
公開日2014-06-11
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Structural and functional characterization of human and murine C5a anaphylatoxins.
Acta Crystallogr. D Biol. Crystallogr., 70, 2014
4P2Y
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BU of 4p2y by Molmil
Crystal structure of the human RAGE ectodomain (fragment VC1C2) in complex with mouse S100A6
分子名称: ACETATE ION, Advanced glycosylation end product-specific receptor, CALCIUM ION, ...
著者Yatime, L, Andersen, G.R.
登録日2014-03-05
公開日2015-03-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure of the RAGE:S100A6 Complex Reveals a Unique Mode of Homodimerization for S100 Proteins.
Structure, 2016
4OFV
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BU of 4ofv by Molmil
Refinement of RAGE-DNA complex in 3S58 without DNA
分子名称: Advanced glycosylation end product-specific receptor
著者Yatime, L, Andersen, G.R.
登録日2014-01-15
公開日2014-04-23
最終更新日2025-03-12
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献The specificity of DNA recognition by the RAGE receptor.
J.Exp.Med., 211, 2014
4P3B
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BU of 4p3b by Molmil
Crystal structure of the mouse C5a-desArg anaphylatoxin
分子名称: Complement C5, FORMIC ACID
著者Yatime, L, Schatz-Jakobsen, J.A, Andersen, G.R.
登録日2014-03-06
公開日2014-06-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and functional characterization of human and murine C5a anaphylatoxins.
Acta Crystallogr. D Biol. Crystallogr., 70, 2014
7NP9
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BU of 7np9 by Molmil
Structure of the human CR3 - CD11bCD18 specific nanobody hCR3Nb1
分子名称: SULFATE ION, hCR3Nb1
著者Jensen, R.K, Andersen, G.R.
登録日2021-02-26
公開日2022-03-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Structural insights into the function-modulating effects of nanobody binding to the integrin receptor alpha M beta 2.
J.Biol.Chem., 298, 2022
2E1R
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BU of 2e1r by Molmil
Structure of eEF2 in complex with a sordarin derivative
分子名称: (1S,4S,5S,6R,9S,11S)-6-CHLORO-9-FORMYL-13-ISOPROPYL-5-METHYL-2-({[(3AR,5R,7R ,7AS)-7-METHYL-3-METHYLENEHEXAHYDRO-2H-FURO[2,3-C]PYRAN-5-YL]OXY}METHYL)TETR ACYCLO[7.4.0.02,11.04,8]TRIDEC-12-ENE-1-CARBOXYLIC ACI, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE
著者Soe, R, Mosley, R.T, Andersen, G.R.
登録日2006-10-27
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2
J.Biol.Chem., 282, 2007
2NPF
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BU of 2npf by Molmil
Structure of eEF2 in complex with moriniafungin
分子名称: (1S,4R,5R,9S,11S)-2-({[(2S,5R,6R,7R,9S,10R)-2-(7-CARBOXYHEPTYL)-6-HYDROXY-10-METHOXY-9-METHYL-3-OXO-1,4,8-TRIOXASPIRO[4 .5]DEC-7-YL]OXY}METHYL)-9-FORMYL-13-ISOPROPYL-5-METHYLTETRACYCLO[7.4.0.02,11.04.8]TRIDEC-12-ENE-1-CARBOXYLIC ACID, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE
著者Soe, R, Mosley, R.T, Andersen, G.R.
登録日2006-10-27
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2
J.Biol.Chem., 282, 2007
5HLO
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BU of 5hlo by Molmil
Crystal structure of calcium and zinc-bound human S100A8 in space group C2221
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Lin, H, Andersen, G.R, Yatime, L.
登録日2016-01-15
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of human S100A8 in complex with zinc and calcium.
Bmc Struct.Biol., 16, 2016
5I5K
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BU of 5i5k by Molmil
Structure of complement C5 in complex with eculizumab
分子名称: Complement C5, Eculizumab heavy chain (variable domain), Eculizumab light chain (variable domain), ...
著者Schatz-Jakobsen, J.A, Andersen, G.R.
登録日2016-02-15
公開日2016-03-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structural Basis for Eculizumab-Mediated Inhibition of the Complement Terminal Pathway.
J Immunol., 197, 2016
5I8Q
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BU of 5i8q by Molmil
S. cerevisiae Prp43 in complex with RNA and ADPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43, ...
著者He, Y, Nielsen, K.H, Andersen, G.R.
登録日2016-02-19
公開日2017-02-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Structure of the DEAH/RHA ATPase Prp43p bound to RNA implicates a pair of hairpins and motif Va in translocation along RNA.
RNA, 23, 2017
5HLV
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BU of 5hlv by Molmil
Crystal structure of calcium and zinc-bound human S100A8 in space group P212121
分子名称: ACETATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Lin, H, Andersen, G.R, Yatime, L.
登録日2016-01-15
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of human S100A8 in complex with zinc and calcium.
Bmc Struct.Biol., 16, 2016
4M76
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BU of 4m76 by Molmil
Integrin I domain of complement receptor 3 in complex with C3d
分子名称: Complement C3, Integrin alpha-M, NICKEL (II) ION
著者Bajic, G, Yatime, L, Vorup-Jensen, T, Andersen, G.R.
登録日2013-08-12
公開日2013-10-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献Structural insight on the recognition of surface-bound opsonins by the integrin I domain of complement receptor 3.
Proc.Natl.Acad.Sci.USA, 110, 2013
4LP5
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BU of 4lp5 by Molmil
Crystal structure of the full-length human RAGE extracellular domain (VC1C2 fragment)
分子名称: Advanced glycosylation end product-specific receptor
著者Yatime, L, Andersen, G.R.
登録日2013-07-15
公開日2013-10-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structural insights into the oligomerization mode of the human receptor for advanced glycation end-products.
Febs J., 280, 2013
4LP4
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BU of 4lp4 by Molmil
Crystal structure of the human RAGE VC1 fragment in space group P62
分子名称: Advanced glycosylation end product-specific receptor, SODIUM ION
著者Yatime, L, Andersen, G.R.
登録日2013-07-15
公開日2013-10-16
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural insights into the oligomerization mode of the human receptor for advanced glycation end-products.
Febs J., 280, 2013
4OF5
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BU of 4of5 by Molmil
Refinement of RAGE-DNA complex in 3S59 without DNA
分子名称: Advanced glycosylation end product-specific receptor
著者Yatime, L, Andersen, G.R.
登録日2014-01-14
公開日2014-04-23
最終更新日2025-03-12
実験手法X-RAY DIFFRACTION (2.803 Å)
主引用文献The specificity of DNA recognition by the RAGE receptor.
J.Exp.Med., 211, 2014
7QIV
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BU of 7qiv by Molmil
Structure of human C3b in complex with the EWE nanobody
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3 beta chain, Complement C3b alpha' chain, ...
著者Pedersen, H, Andersen, G.R.
登録日2021-12-16
公開日2022-02-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-Guided Engineering of a Complement Component C3-Binding Nanobody Improves Specificity and Adds Cofactor Activity.
Front Immunol, 13, 2022
7Q60
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BU of 7q60 by Molmil
Structure of TEV cleaved A2ML1 (A2ML1-TE)
分子名称: Alpha-2-macroglobulin-like protein 1
著者Nielsen, N.S, Zarantonello, A, Andersen, G.R.
登録日2021-11-05
公開日2022-04-20
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Cryo-EM structures of human A2ML1 elucidate the protease-inhibitory mechanism of the A2M family.
Nat Commun, 13, 2022
7Q62
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BU of 7q62 by Molmil
Structure of TEV cleaved A2ML1 dimer (A2ML1-TT dimer)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin-like protein 1
著者Nielsen, N.S, Zarantonello, A, Andersen, G.R.
登録日2021-11-05
公開日2022-04-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Cryo-EM structures of human A2ML1 elucidate the protease-inhibitory mechanism of the A2M family.
Nat Commun, 13, 2022
7Q61
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BU of 7q61 by Molmil
Structure of TEV conjugated A2ML1 (A2ML1-TC)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-2-macroglobulin-like protein 1
著者Nielsen, N.S, Zarantonello, A, Andersen, G.R.
登録日2021-11-05
公開日2022-04-20
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Cryo-EM structures of human A2ML1 elucidate the protease-inhibitory mechanism of the A2M family.
Nat Commun, 13, 2022
7Q5Z
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BU of 7q5z by Molmil
Cryo-EM structure of native human A2ML1
分子名称: Alpha-2-macroglobulin-like protein 1
著者Zarantonello, A, Nielsen, N.S, Andersen, G.R.
登録日2021-11-05
公開日2022-04-20
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Cryo-EM structures of human A2ML1 elucidate the protease-inhibitory mechanism of the A2M family.
Nat Commun, 13, 2022

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