Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8HI2
DownloadVisualize
BU of 8hi2 by Molmil
Structure of EV71 VLP frozen at -183 degree embedded in crystalline ice
分子名称: Genome polyprotein, Genome polyprotein (Fragment)
著者Shi, H, Wu, C, Zhang, X.
登録日2022-11-18
公開日2023-02-01
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
8HHS
DownloadVisualize
BU of 8hhs by Molmil
Structure of human apoferritin embedded in crystalline ice
分子名称: Ferritin heavy chain
著者Shi, H, Wu, C, Zhang, X.
登録日2022-11-17
公開日2023-02-15
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
5YC6
DownloadVisualize
BU of 5yc6 by Molmil
The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH4.6
分子名称: 1-(4-BROMOPHENYL)METHANAMINE, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Jiang, L.G, Zhang, X, Huang, M.D.
登録日2017-09-06
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases
Rsc Adv, 8, 2018
6GSC
DownloadVisualize
BU of 6gsc by Molmil
Sphingobacterium sp. T2 manganese superoxide dismutase catalyses the oxidative demethylation of polymeric lignin via generation of hydroxyl radical
分子名称: MANGANESE (II) ION, Superoxide dismutase
著者Rashid, G.M.M, Zhang, X, Wilkinson, R.C, Fulop, V, Cottyn, B, Baumberger, S, Bugg, T.D.H.
登録日2018-06-13
公開日2018-10-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Sphingobacterium sp. T2 Manganese Superoxide Dismutase Catalyzes the Oxidative Demethylation of Polymeric Lignin via Generation of Hydroxyl Radical.
ACS Chem. Biol., 13, 2018
6J7G
DownloadVisualize
BU of 6j7g by Molmil
Human H-ferritin mutant-C90A/C102A/C130A/D144C
分子名称: Ferritin heavy chain
著者Zang, J, Chen, H, Zhang, X, Zhao, G.
登録日2019-01-18
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.868 Å)
主引用文献Disulfide-mediated conversion of 8-mer bowl-like protein architecture into three different nanocages.
Nat Commun, 10, 2019
7DB7
DownloadVisualize
BU of 7db7 by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound GDI05-001
分子名称: 1-[3-[2-(1H-indol-3-yl)ethylsulfamoyl]phenyl]-3-(1,3-thiazol-2-yl)urea, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, ...
著者Xu, M, Zhang, X, Xu, L, Chen, S.
登録日2020-10-19
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
8IHP
DownloadVisualize
BU of 8ihp by Molmil
Structure of Semliki Forest virus VLP in complex with the receptor VLDLR-LA3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Capsid protein, ...
著者Cao, D, Ma, B, Cao, Z, Zhang, X, Xiang, Y.
登録日2023-02-23
公開日2023-04-12
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of Semliki Forest virus in complex with its receptor VLDLR.
Cell, 186, 2023
5YC7
DownloadVisualize
BU of 5yc7 by Molmil
The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH7.4
分子名称: 1-(4-BROMOPHENYL)METHANAMINE, SULFATE ION, Urokinase-type plasminogen activator
著者Jiang, L.G, Zhang, X, Huang, M.D.
登録日2017-09-06
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases
Rsc Adv, 8, 2018
8WOR
DownloadVisualize
BU of 8wor by Molmil
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
登録日2023-10-07
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
8WOT
DownloadVisualize
BU of 8wot by Molmil
Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
登録日2023-10-07
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
8WOQ
DownloadVisualize
BU of 8woq by Molmil
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
登録日2023-10-07
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
8WOS
DownloadVisualize
BU of 8wos by Molmil
Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Liu, W, Tang, M, Wang, J, Zhang, X, Wu, S, Ru, H.
登録日2023-10-07
公開日2024-03-20
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural insights into cholesterol transport and hydrolase activity of a putative human RNA transport protein SIDT1.
Cell Discov, 10, 2024
8HZN
DownloadVisualize
BU of 8hzn by Molmil
Mouse Pendrin bound chloride in inward state
分子名称: CHLORIDE ION, Pendrin
著者Liu, Q.Y, Zhang, X, Sun, L, Chen, Z.G.
登録日2023-01-09
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Mouse Pendrin bound chloride in inward state
To Be Published
7DAW
DownloadVisualize
BU of 7daw by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase
分子名称: Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, SULFATE ION
著者Xu, M, Zhang, X, Xu, L, Chen, S.
登録日2020-10-18
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
7DB8
DownloadVisualize
BU of 7db8 by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound PF-3845
分子名称: N-pyridin-3-yl-4-[[3-[5-(trifluoromethyl)pyridin-2-yl]oxyphenyl]methyl]piperidine-1-carboxamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, ...
著者Xu, M, Zhang, X, Xu, L, Chen, S.
登録日2020-10-19
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
4OU1
DownloadVisualize
BU of 4ou1 by Molmil
Crystal structure of a computationally designed retro-aldolase covalently bound to folding probe 1 [(6-methoxynaphthalen-2-yl)(oxiran-2-yl)methanol]
分子名称: (1S,2S)-1-(6-methoxynaphthalen-2-yl)propane-1,2-diol, BENZOIC ACID, PHOSPHATE ION, ...
著者Bhabha, G, Zhang, X, Ekiert, D.C.
登録日2014-02-14
公開日2014-03-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Small molecule probes to quantify the functional fraction of a specific protein in a cell with minimal folding equilibrium shifts.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PEK
DownloadVisualize
BU of 4pek by Molmil
Crystal structure of a computationally designed retro-aldolase, RA114.3
分子名称: Retro-aldolase
著者Bhabha, G, Zhang, X, Liu, Y, Ekiert, D.C.
登録日2014-04-23
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献De novo-designed enzymes as small-molecule-regulated fluorescence imaging tags and fluorescent reporters.
J.Am.Chem.Soc., 136, 2014
4PEJ
DownloadVisualize
BU of 4pej by Molmil
Crystal structure of a computationally designed retro-aldolase, RA110.4 (Cys free)
分子名称: Retro-aldolase
著者Bhabha, G, Zhang, X, Liu, Y, Ekiert, D.C.
登録日2014-04-23
公開日2015-04-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献De novo-designed enzymes as small-molecule-regulated fluorescence imaging tags and fluorescent reporters.
J.Am.Chem.Soc., 136, 2014
8OPI
DownloadVisualize
BU of 8opi by Molmil
VHH Z70 mutant 1 in interaction with PHF6 Tau peptide
分子名称: PHF6 Tau peptide, VHH Z70 mutant 1
著者Dupre, E, Mortelecque, J, NGuyen, M, Hanoulle, X, Landrieu, I.
登録日2023-04-07
公開日2023-05-31
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献A selection and optimization strategy for single-domain antibodies targeting the PHF6 linear peptide within the tau intrinsically disordered protein.
J.Biol.Chem., 300, 2024
8OP0
DownloadVisualize
BU of 8op0 by Molmil
VHH Z70 mutant 20 in interaction with PHF6 Tau peptide
分子名称: Tau PHF6 peptide, VHH Z70 mutant 20
著者Dupre, E, Mortelecque, J, NGuyen, M, Hanoulle, X, Landrieu, I.
登録日2023-04-06
公開日2023-05-31
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献A selection and optimization strategy for single-domain antibodies targeting the PHF6 linear peptide within the tau intrinsically disordered protein.
J.Biol.Chem., 300, 2024
5ZGC
DownloadVisualize
BU of 5zgc by Molmil
Crystal Structure of SIRT3 in complex with H4K16bhb peptide
分子名称: Histone H4K16bhb peptide, NAD-dependent protein deacetylase sirtuin-3, mitochondrial, ...
著者Li, H, Zhang, X.
登録日2018-03-08
公開日2019-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal Structure of SIRT3 in complex with H4K16bhb peptide
To be published
5Z1C
DownloadVisualize
BU of 5z1c by Molmil
The crystal structure of uPA in complex with 4-Iodobenzylamine at pH7.4
分子名称: 1-(4-iodophenyl)methanamine, Urokinase-type plasminogen activator
著者Jiang, L.G, Zhang, X, Luo, Z.P, Huang, M.D.
登録日2017-12-25
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases
Rsc Adv, 49, 2018
6I52
DownloadVisualize
BU of 6i52 by Molmil
Yeast RPA bound to ssDNA
分子名称: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Replication factor A protein 1, Replication factor A protein 2, ...
著者Yates, L.A, Aramayo, R.J, Zhang, X.
登録日2018-11-12
公開日2018-12-19
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献A structural and dynamic model for the assembly of Replication Protein A on single-stranded DNA.
Nat Commun, 9, 2018
6IFU
DownloadVisualize
BU of 6ifu by Molmil
Cryo-EM structure of type III-A Csm-CTR2-dsDNA complex
分子名称: CTR2, Type III-A CRISPR-associated RAMP protein Csm3, Type III-A CRISPR-associated RAMP protein Csm4, ...
著者You, L, Ma, J, Wang, J, Zhang, X, Wang, Y.
登録日2018-09-21
公開日2018-12-12
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Cell, 176, 2019
6IFR
DownloadVisualize
BU of 6ifr by Molmil
Type III-A Csm complex, Cryo-EM structure of Csm-NTR, ATP bound
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Type III-A CRISPR-associated RAMP protein Csm3, ...
著者You, L, Ma, J, Wang, J, Zhang, X, Wang, Y.
登録日2018-09-21
公開日2018-12-12
最終更新日2019-01-23
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Cell, 176, 2019

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon