Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6ZM2
DownloadVisualize
BU of 6zm2 by Molmil
Crystal structure of the DEAH-box ATPase Prp2 in complex with ADP-BeF3 and ssRNA
分子名称: 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ADENOSINE-5'-DIPHOSPHATE, ...
著者Hamann, F, Ficner, R.
登録日2020-07-01
公開日2021-04-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of Prp2 bound to RNA and ADP-BeF 3 - reveals structural features important for RNA unwinding by DEAH-box ATPases.
Acta Crystallogr D Struct Biol, 77, 2021
2GBS
DownloadVisualize
BU of 2gbs by Molmil
NMR structure of Rpa0253 from Rhodopseudomonas palustris. Northeast structural genomics consortium target RpR3
分子名称: Hypothetical protein Rpa0253
著者Ramelot, T.A, Cort, J.R, Conover, K, Chen, Y, Ma, L.C, Ciano, M, Xiao, R, Acton, T.B, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
登録日2006-03-11
公開日2006-04-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural genomics reveals EVE as a new ASCH/PUA-related domain.
Proteins, 75, 2009
8TC9
DownloadVisualize
BU of 8tc9 by Molmil
Human asparaginyl-tRNA synthetase bound to OSM-S-106
分子名称: Asparagine--tRNA ligase, cytoplasmic, GLYCEROL, ...
著者Dogovski, C, Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
登録日2023-06-30
公開日2024-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
8TC8
DownloadVisualize
BU of 8tc8 by Molmil
Human asparaginyl-tRNA synthetase bound to adenosine 5'-sulfamate
分子名称: 5'-O-[N-(L-ASPARAGINYL)SULFAMOYL]ADENOSINE, Asparagine--tRNA ligase, cytoplasmic, ...
著者Dogovski, C, Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
登録日2023-06-30
公開日2024-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
8TC7
DownloadVisualize
BU of 8tc7 by Molmil
Human asparaginyl-tRNA synthetase, apo form
分子名称: Asparagine--tRNA ligase, cytoplasmic, CHLORIDE ION, ...
著者Dogovski, C, Metcalfe, R.D, Xie, S.C, Morton, C.J, Tilley, L, Griffin, M.D.W.
登録日2023-06-30
公開日2024-02-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Reaction hijacking inhibition of Plasmodium falciparum asparagine tRNA synthetase.
Nat Commun, 15, 2024
6ZYT
DownloadVisualize
BU of 6zyt by Molmil
Monomeric streptavidin with a conjugated biotinylated pyrrolidine
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, SULFATE ION, Streptavidin/Rhizavidin Hybrid
著者Nodling, A.R, Lipka-Lloyd, M, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2020-08-03
公開日2021-08-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
7JQ8
DownloadVisualize
BU of 7jq8 by Molmil
Solution NMR structure of human Brd3 ET domain
分子名称: Bromodomain-containing protein 3, Integrase peptide
著者Aiyer, S, Swapna, G.V.T, Roth, J.M, Montelione, G.T.
登録日2020-08-10
公開日2021-06-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins.
Structure, 29, 2021
7JMY
DownloadVisualize
BU of 7jmy by Molmil
Solution NMR structure of human Brd3 ET domain
分子名称: Bromodomain-containing protein 3
著者Aiyer, S, Swapna, G.V.T, Roth, J.M, Montelione, G.T.
登録日2020-08-03
公開日2021-03-03
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins.
Structure, 29, 2021
8U5G
DownloadVisualize
BU of 8u5g by Molmil
Crystal structure of the co-expressed SDS22:PP1:I3 complex
分子名称: E3 ubiquitin-protein ligase PPP1R11, FE (III) ION, PHOSPHATE ION, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2023-09-12
公開日2023-12-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The SDS22:PP1:I3 complex: SDS22 binding to PP1 loosens the active site metal to prime metal exchange.
J.Biol.Chem., 300, 2023
7JYN
DownloadVisualize
BU of 7jyn by Molmil
Solution NMR structure of human Brd3 ET complexed with NSD3(148-184) peptide
分子名称: Bromodomain-containing protein 3, Histone-lysine N-methyltransferase NSD3
著者Aiyer, S, Swapna, G.V.T, Roth, M.J, Montelione, G.T.
登録日2020-08-31
公開日2021-06-23
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献A common binding motif in the ET domain of BRD3 forms polymorphic structural interfaces with host and viral proteins.
Structure, 29, 2021
8UMO
DownloadVisualize
BU of 8umo by Molmil
Murine CD94-NKG2A receptor in complex with Qa-1b presenting AMAPRTLLL
分子名称: BROMIDE ION, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
著者MacLachlan, B.J, Rossjohn, J, Vivian, J.P.
登録日2023-10-18
公開日2024-01-17
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the murine CD94-NKG2A receptor in complex with Qa-1 b presenting an MHC-I leader peptide.
Febs J., 291, 2024
8TUB
DownloadVisualize
BU of 8tub by Molmil
HLA B7:02 with HPNGYKSLSTL
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, ...
著者Littler, D.R, Rossjohn, J, Chaurasia, P, Petersen, J.
登録日2023-08-16
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献CD8 + T-cell responses towards conserved influenza B virus epitopes across anatomical sites and age.
Nat Commun, 15, 2024
8TUH
DownloadVisualize
BU of 8tuh by Molmil
HLA B7:02 with RPIIRPATL
分子名称: 1,2-ETHANEDIOL, ARG-PRO-ILE-ILE-ARG-PRO-ALA-THR-LEU, Beta-2-microglobulin, ...
著者Littler, D.R, Rossjohn, J, Chaurasia, P, Petersen, J.
登録日2023-08-16
公開日2024-03-13
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.200106 Å)
主引用文献CD8 + T-cell responses towards conserved influenza B virus epitopes across anatomical sites and age.
Nat Commun, 15, 2024
8TWQ
DownloadVisualize
BU of 8twq by Molmil
Structure of bacteriophage lambda RexA protein
分子名称: CADMIUM ION, Protein rexA, SULFATE ION
著者Adams, M.C, Chappie, J.S, Schiltz, C.J.
登録日2023-08-21
公開日2024-04-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of bacteriophage lambda RexA provides novel insights into the DNA binding properties of Rex-like phage exclusion proteins.
Nucleic Acids Res., 52, 2024
6ZOZ
DownloadVisualize
BU of 6zoz by Molmil
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x1 disulphide-bond mutant, S383C, D985C, K986P, V987P, single Arg S1/S2 cleavage site) in Locked State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
6ZWC
DownloadVisualize
BU of 6zwc by Molmil
Z-SBTub2 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 2-[2-(3,4,5-trimethoxyphenyl)ethyl]-1,3-benzothiazole, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
登録日2020-07-28
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
6ZOY
DownloadVisualize
BU of 6zoy by Molmil
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x1 disulphide-bond mutant, S383C, D985C, K986P, V987P, single Arg S1/S2 cleavage site) in Closed State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
6ZWB
DownloadVisualize
BU of 6zwb by Molmil
Z-SBTub3 photoswitch bound to tubulin-DARPin D1 complex
分子名称: 5-[2-(1,3-benzothiazol-2-yl)ethyl]-2-methoxy-phenol, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
著者Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
登録日2020-07-28
公開日2020-12-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.747 Å)
主引用文献A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
6ZP0
DownloadVisualize
BU of 6zp0 by Molmil
Structure of SARS-CoV-2 Spike Protein Trimer (single Arg S1/S2 cleavage site) in Closed State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
6ZP1
DownloadVisualize
BU of 6zp1 by Molmil
Structure of SARS-CoV-2 Spike Protein Trimer (K986P, V987P, single Arg S1/S2 cleavage site) in Closed State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
6ZOX
DownloadVisualize
BU of 6zox by Molmil
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x2 disulphide-bond mutant, G413C, V987C, single Arg S1/S2 cleavage site)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2021-06-02
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
6ZP2
DownloadVisualize
BU of 6zp2 by Molmil
Structure of SARS-CoV-2 Spike Protein Trimer (K986P, V987P, single Arg S1/S2 cleavage site) in Locked State
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BILIVERDINE IX ALPHA, ...
著者Xiong, X, Qu, K, Scheres, S.H.W, Briggs, J.A.G.
登録日2020-07-08
公開日2020-07-22
最終更新日2022-03-02
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献A thermostable, closed SARS-CoV-2 spike protein trimer.
Nat.Struct.Mol.Biol., 27, 2020
8YD8
DownloadVisualize
BU of 8yd8 by Molmil
Structure of FADD/Caspase-8/cFLIP death effector domain assembly
分子名称: CASP8 and FADD-like apoptosis regulator subunit p43, Caspase-8, FAS-associated death domain protein
著者Lin, S.-C, Yang, C.-Y.
登録日2024-02-19
公開日2024-05-15
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Deciphering DED assembly mechanisms in FADD-procaspase-8-cFLIP complexes regulating apoptosis.
Nat Commun, 15, 2024
8YD7
DownloadVisualize
BU of 8yd7 by Molmil
Structure of FADD/Caspase-8/cFLIP death effector domain assembly
分子名称: CASP8 and FADD-like apoptosis regulator subunit p12, Caspase-8, FAS-associated death domain protein, ...
著者Lin, S.-C, Yang, C.-Y.
登録日2024-02-19
公開日2024-05-15
実験手法X-RAY DIFFRACTION (3.32 Å)
主引用文献Deciphering DED assembly mechanisms in FADD-procaspase-8-cFLIP complexes regulating apoptosis.
Nat Commun, 15, 2024
7KJP
DownloadVisualize
BU of 7kjp by Molmil
Disulfide Stabilized Norovirus GI.1 VLP Shell Region
分子名称: Capsid protein VP1
著者Gorman, J, Kwong, P.D.
登録日2020-10-26
公開日2020-12-02
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Disulfide stabilization of human norovirus GI.1 virus-like particles focuses immune response toward blockade epitopes.
NPJ Vaccines, 5, 2020

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon