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5D92
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BU of 5d92 by Molmil
Structure of a phosphatidylinositolphosphate (PIP) synthase from Renibacterium Salmoninarum
分子名称: 5'-O-[(R)-{[(S)-{(2R)-2,3-bis[(9E)-octadec-9-enoyloxy]propoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine, AF2299 protein,Phosphatidylinositol synthase, MAGNESIUM ION, ...
著者Clarke, O.B, Tomasek, D.T, Jorge, C.D, Belcher Dufrisne, M, Kim, M, Banerjee, S, Rajashankar, K.R, Hendrickson, W.A, Santos, H, Mancia, F.
登録日2015-08-18
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.62 Å)
主引用文献Structural basis for phosphatidylinositol-phosphate biosynthesis.
Nat Commun, 6, 2015
5K3X
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BU of 5k3x by Molmil
Crystal Structure of the sulfite dehydrogenase, SorT R78K mutant from Sinorhizobium meliloti
分子名称: (MOLYBDOPTERIN-S,S)-OXO-MOLYBDENUM, GLYCEROL, Putative sulfite oxidase
著者Lee, M, McGrath, A, Maher, M.
登録日2016-05-20
公開日2017-05-24
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The central active site arginine in sulfite oxidizing enzymes alters kinetic properties by controlling electron transfer and redox interactions.
Biochim. Biophys. Acta, 1859, 2017
8RPR
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BU of 8rpr by Molmil
Crystal Structure of SgvM methyltransferase in complex with alpha-ketoleucine and Zn2+ ion
分子名称: 2-OXO-4-METHYLPENTANOIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Saleem-Batcha, R, Zou, Z, Breiltgens, J, Mueller, M, Andexer, J.N.
登録日2024-01-16
公開日2024-07-24
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structures and Protein Engineering of the alpha-Keto Acid C-Methyltransferases SgvM and MrsA for Rational Substrate Transfer.
Chembiochem, 2024
8A82
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BU of 8a82 by Molmil
Fe(II)/aKG-dependent halogenase OocPQ
分子名称: Cupin_8 domain-containing protein, FE (III) ION, GLYCEROL, ...
著者Fraley, A.E, Meoded, R.A, Schmalhofer, M, Bergande, C, Groll, M, Piel, J.
登録日2022-06-21
公開日2023-03-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Heterocomplex structure of a polyketide synthase component involved in modular backbone halogenation.
Structure, 31, 2023
7SWL
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BU of 7swl by Molmil
CryoEM structure of the N-terminal-deleted Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-20
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
7T0V
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BU of 7t0v by Molmil
CryoEM structure of the crosslinked Rix7 AAA-ATPase
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Kocaman, S, Stanley, R.E, Lo, Y.H, Krahn, J, Dandey, V.P, Sobhany, M, Petrovich, M, Williams, J.G, Deterding, L.J, Borgnia, M.J, Etigunta, S.
登録日2021-11-30
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Communication network within the essential AAA-ATPase Rix7 drives ribosome assembly.
Pnas Nexus, 1, 2022
10MH
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BU of 10mh by Molmil
TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGET
分子名称: DNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*5NCP*GP*CP*AP*TP*GP*G)-3'), PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI), ...
著者Sheikhnejad, G, Brank, A, Christman, J.K, Goddard, A, Alvarez, E, Ford Junior, H, Marquez, V.E, Marasco, C.J, Sufrin, J.R, O'Gara, M, Cheng, X.
登録日1998-08-10
公開日1999-02-09
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Mechanism of inhibition of DNA (cytosine C5)-methyltransferases by oligodeoxyribonucleotides containing 5,6-dihydro-5-azacytosine.
J.Mol.Biol., 285, 1999
116D
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BU of 116d by Molmil
CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXIS
分子名称: DNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')
著者Bingman, C.A, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal and molecular structure of the A-DNA dodecamer d(CCGTACGTACGG). Choice of fragment helical axis.
J.Mol.Biol., 227, 1992
117D
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BU of 117d by Molmil
CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)
分子名称: DNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')
著者Bingman, C.A, Jain, S, Zon, G, Sundaralingam, M.
登録日1993-02-10
公開日1993-04-15
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal and molecular structure of the alternating dodecamer d(GCGTACGTACGC) in the A-DNA form: comparison with the isomorphous non-alternating dodecamer d(CCGTACGTACGG).
Nucleic Acids Res., 20, 1992
1AK9
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BU of 1ak9 by Molmil
SUBTILISIN MUTANT 8321
分子名称: CALCIUM ION, ISOPROPYL ALCOHOL, SODIUM ION, ...
著者Whitlow, M, Howard, A.J, Wood, J.F.
登録日1997-05-30
公開日1997-11-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Large increases in general stability for subtilisin BPN' through incremental changes in the free energy of unfolding.
Biochemistry, 28, 1989
124D
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BU of 124d by Molmil
STRUCTURE OF A DNA:RNA HYBRID DUPLEX: WHY RNASE H DOES NOT CLEAVE PURE RNA
分子名称: DNA (5'-D(*GP*TP*CP*AP*CP*AP*TP*G)-3'), RNA (5'-R(*CP*AP*UP*GP*UP*GP*AP*C)-3')
著者Fedoroff, O.Y, Salazar, M, Reid, B.R.
登録日1993-05-07
公開日1993-10-31
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of a DNA:RNA Hybrid Duplex. Why Rnase H Does not Cleave Pure RNA
J.Mol.Biol., 233, 1993
3EB9
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BU of 3eb9 by Molmil
Crystal structure of 6-phosphogluconolactonase from trypanosoma brucei complexed with citrate
分子名称: 6-phosphogluconolactonase, CITRATE ANION, ZINC ION
著者Poggi, L, Delarue, M, Duclert-Savatier, N, Stoven, V.
登録日2008-08-27
公開日2009-05-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into the enzymatic mechanism of 6-phosphogluconolactonase from Trypanosoma brucei using structural data and molecular dynamics simulation.
J.Mol.Biol., 388, 2009
3EQS
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BU of 3eqs by Molmil
Crystal structure of human MDM2 in complex with a 12-mer peptide inhibitor
分子名称: 12-mer peptide inhibitor, E3 ubiquitin-protein ligase Mdm2, GUANIDINE
著者Pazgier, M, Lu, W.
登録日2008-10-01
公開日2009-03-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis for high-affinity peptide inhibition of p53 interactions with MDM2 and MDMX.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EQY
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BU of 3eqy by Molmil
Crystal structure of human MDMX in complex with a 12-mer peptide inhibitor
分子名称: 12-mer peptide inhibitor, GUANIDINE, Mdm4 protein, ...
著者Pazgier, M, Lu, W.
登録日2008-10-01
公開日2009-03-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Structural basis for high-affinity peptide inhibition of p53 interactions with MDM2 and MDMX.
Proc.Natl.Acad.Sci.USA, 106, 2009
3EY2
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BU of 3ey2 by Molmil
A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High Resolution
分子名称: 5'-D(*GP*CP*GP*TP*AP*(USM)P*AP*CP*GP*C)-3', N-methylpropane-1,3-diamine
著者Egli, M, Pallan, P.S.
登録日2008-10-17
公開日2009-04-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献A conformational transition in the structure of a 2'-thiomethyl-modified DNA visualized at high resolution.
Chem.Commun.(Camb.), 15, 2009
3EWI
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BU of 3ewi by Molmil
Structural analysis of the C-terminal domain of murine CMP-Sialic acid Synthetase
分子名称: N-acylneuraminate cytidylyltransferase
著者Oschlies, M, Dickmanns, A, Stummeyer, K, Gerardy-Schahn, R, Ficner, R, Muenster-Kuehnel, A.K.
登録日2008-10-15
公開日2009-08-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A C-terminal phosphatase module conserved in vertebrate CMP-sialic acid synthetases provides a tetramerization interface for the physiologically active enzyme.
J.Mol.Biol., 393, 2009
3EY6
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BU of 3ey6 by Molmil
Crystal structure of the FK506-binding domain of human FKBP38
分子名称: FK506-binding protein 8
著者Parthier, C, Maestre-Martinez, M, Neumann, P, Edlich, F, Fischer, G, Luecke, C, Stubbs, M.T.
登録日2008-10-19
公開日2009-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献A charge-sensitive loop in the FKBP38 catalytic domain modulates Bcl-2 binding.
J.Mol.Recognit., 24, 2011
3F3T
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BU of 3f3t by Molmil
Kinase domain of cSrc in complex with inhibitor RL38 (Type III)
分子名称: 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea, Proto-oncogene tyrosine-protein kinase Src
著者Gruetter, C, Klueter, S, Getlik, M, Rauh, D.
登録日2008-10-31
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A new screening assay for allosteric inhibitors of cSrc
Nat.Chem.Biol., 5, 2009
3F1R
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BU of 3f1r by Molmil
Crystal structure of FGF20 dimer
分子名称: Fibroblast growth factor 20, SULFATE ION
著者Kalinina, J, Mohammadi, M.
登録日2008-10-28
公開日2009-07-28
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Homodimerization controls the fibroblast growth factor 9 subfamily's receptor binding and heparan sulfate-dependent diffusion in the extracellular matrix
Mol.Cell.Biol., 29, 2009
4R1Y
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BU of 4r1y by Molmil
Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitor
分子名称: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 3-(diethylamino)propyl (3-{[5-(3,4-dimethoxyphenyl)-2-oxo-2H-1,3,4-thiadiazin-3(6H)-yl]methyl}phenyl)carbamate, Hepatocyte growth factor receptor
著者Blaukat, A, Bladt, F, Friese-Hamim, M, Knuehl, C, Fittschen, C, Graedler, U, Meyring, M, Dorsch, D, Stieber, F, Schadt, O.
登録日2014-08-08
公開日2015-03-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification and optimization of pyridazinones as potent and selective c-Met kinase inhibitors.
Bioorg.Med.Chem.Lett., 25, 2015
4R6Q
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BU of 4r6q by Molmil
Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity.
分子名称: 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ...
著者Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M.
登録日2014-08-26
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity.
Acta Crystallogr.,Sect.D, 71, 2015
4RDL
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BU of 4rdl by Molmil
Crystal structure of Norovirus Boxer P domain in complex with Lewis y tetrasaccharide
分子名称: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
登録日2014-09-19
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.449 Å)
主引用文献Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
6W0L
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BU of 6w0l by Molmil
Henipavirus W protein interacts with 14-3-3 to modulate host gene expression
分子名称: 14-3-3 protein sigma, CALCIUM ION, Phosphorylated W peptide
著者Edwards, M, Hoad, M, Tsimbalyuk, S, Menicucci, A, Messaoudi, I, Forwood, J, Basler, C.
登録日2020-03-01
公開日2020-04-22
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Henipavirus W Proteins Interact with 14-3-3 To Modulate Host Gene Expression.
J.Virol., 94, 2020
4RDK
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BU of 4rdk by Molmil
Crystal structure of Norovirus Boxer P domain in complex with Lewis b tetrasaccharide
分子名称: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
著者Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
登録日2014-09-19
公開日2015-01-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.629 Å)
主引用文献Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
7ARS
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The de novo designed hybrid alpha/beta-miniprotein (with Se-Methionine)
分子名称: MAGNESIUM ION, alpha/beta-peptide, trifluoroacetic acid
著者Bejger, M, Fortuna, P, Drewniak-Switalska, M, Rypniewski, W, Berlicki, L.
登録日2020-10-26
公開日2021-07-14
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献A computationally designed beta-amino acid-containing miniprotein.
Chem.Commun.(Camb.), 57, 2021

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