Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4PQK
DownloadVisualize
BU of 4pqk by Molmil
C-Terminal domain of DNA binding protein
分子名称: Maltose ABC transporter periplasmic protein, Truncated replication protein RepA, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Schumacher, M.A, Chinnam, N, Tonthat, N.K.
登録日2014-03-03
公開日2014-06-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.401 Å)
主引用文献Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PT7
DownloadVisualize
BU of 4pt7 by Molmil
Structure of initiator
分子名称: Replication initiator A family protein, SULFATE ION
著者Schumacher, M.A.
登録日2014-03-10
公開日2014-06-25
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PQL
DownloadVisualize
BU of 4pql by Molmil
N-Terminal domain of DNA binding protein
分子名称: 1,2-ETHANEDIOL, Truncated replication protein RepA
著者Schumacher, M.A, Chinnam, N, Tonthat, N.K.
登録日2014-03-03
公開日2014-06-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.444 Å)
主引用文献Mechanism of staphylococcal multiresistance plasmid replication origin assembly by the RepA protein.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LSD
DownloadVisualize
BU of 4lsd by Molmil
Myokine structure
分子名称: Fibronectin type III domain-containing protein 5
著者Schumacher, M.A, Ohashi, T, Shah, R.S, Chinnam, N, Erickson, H.
登録日2013-07-22
公開日2013-10-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献The structure of irisin reveals a novel intersubunit beta-sheet fibronectin type III (FNIII) dimer: implications for receptor activation.
J.Biol.Chem., 288, 2013
6U9X
DownloadVisualize
BU of 6u9x by Molmil
Structure of T. brucei MERS1-RNA complex
分子名称: Mitochondrial edited mRNA stability factor 1, RNA (5'-R(*GP*AP*GP*AP*GP*GP*GP*GP*GP*UP*U)-3')
著者Schumacher, M.A.
登録日2019-09-09
公開日2019-11-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6UMK
DownloadVisualize
BU of 6umk by Molmil
Structure of E. coli FtsZ(L178E)-GDP complex
分子名称: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Schumacher, M.A.
登録日2019-10-09
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献High-resolution crystal structures of Escherichia coli FtsZ bound to GDP and GTP.
Acta Crystallogr.,Sect.F, 76, 2020
6UNX
DownloadVisualize
BU of 6unx by Molmil
Structure of E. coli FtsZ(L178E)-GTP complex
分子名称: Cell division protein FtsZ, GUANOSINE-5'-TRIPHOSPHATE
著者Schumacher, M.A.
登録日2019-10-13
公開日2020-02-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献High-resolution crystal structures of Escherichia coli FtsZ bound to GDP and GTP.
Acta Crystallogr.,Sect.F, 76, 2020
3HZI
DownloadVisualize
BU of 3hzi by Molmil
Structure of mdt protein
分子名称: 5'-D(*DAP*DCP*DTP*DAP*DTP*DCP*DCP*DCP*DCP*DTP*DTP*DAP*DAP*DGP*DGP*DGP*DGP*DAP*DTP*DAP*DG)-3', ADENOSINE-5'-TRIPHOSPHATE, HTH-type transcriptional regulator hipB, ...
著者Schumacher, M.A.
登録日2009-06-23
公開日2009-07-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009
5TZF
DownloadVisualize
BU of 5tzf by Molmil
Structure of the BldD CTD(D116A)-(c-di-GMP)2 intermediate, form 1
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein
著者Schumacher, M.A.
登録日2016-11-21
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
5TZG
DownloadVisualize
BU of 5tzg by Molmil
Structure of the BldD CTD(D116A)-(c-di-GMP)2, form 2
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein, ZINC ION
著者Schumacher, M.A.
登録日2016-11-21
公開日2017-04-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
7U3A
DownloadVisualize
BU of 7u3a by Molmil
Structure of the Streptomyces venezuelae GlgX-c-di-GMP complex
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.34 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U3D
DownloadVisualize
BU of 7u3d by Molmil
Structure of S. venezuelae GlgX-c-di-GMP-acarbose complex (4.6)
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-27
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U3B
DownloadVisualize
BU of 7u3b by Molmil
Structure of S. venezuelae GlgX bound to c-di-GMP and acarbose (pH 8.5)
分子名称: 4-O-(4,6-dideoxy-4-{[(1S,2S,3S,4R,5S)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranosyl)-beta-D-glucopyranose, 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Glycogen debranching enzyme GlgX, ...
著者Schumacher, M.A, Tschowri, N.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
7U39
DownloadVisualize
BU of 7u39 by Molmil
Structure of the apo form of Streptomyces venezuelae GlgX, the glycogen debranching enzyme
分子名称: Glycogen debranching enzyme GlgX
著者Schumacher, M.A.
登録日2022-02-26
公開日2022-10-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.51 Å)
主引用文献Allosteric regulation of glycogen breakdown by the second messenger cyclic di-GMP.
Nat Commun, 13, 2022
2G66
DownloadVisualize
BU of 2g66 by Molmil
Crystal structure of a collagen-like peptide with 3(S)Hyp in the Xaa position
分子名称: collagen
著者Schumacher, M.A, Mizuno, K, Bachinger, H.P.
登録日2006-02-24
公開日2006-08-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of a Collagen-like Polypeptide with 3(S)-Hydroxyproline Residues in the Xaa Position Forms a Standard 7/2 Collagen Triple Helix
J.Biol.Chem., 281, 2006
2GIA
DownloadVisualize
BU of 2gia by Molmil
Crystal structures of trypanosoma bruciei MRP1/MRP2
分子名称: ACETIC ACID, mitochondrial RNA-binding protein 1, mitochondrial RNA-binding protein 2
著者Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
登録日2006-03-28
公開日2006-09-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
2GID
DownloadVisualize
BU of 2gid by Molmil
Crystal structures of trypanosoma bruciei MRP1/MRP2
分子名称: mitochondrial RNA-binding protein 1, mitochondrial RNA-binding protein 2
著者Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
登録日2006-03-28
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
2GJE
DownloadVisualize
BU of 2gje by Molmil
Structure of a guideRNA-binding protein complex bound to a gRNA
分子名称: RNA tetramer, guide RNA 40-mer, mitochondrial RNA-binding protein 1, ...
著者Schumacher, M.A, Karamooz, E, Zikova, A, Trantirek, L, Lukes, J.
登録日2006-03-30
公開日2006-09-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Crystal Structures of T. brucei MRP1/MRP2 Guide-RNA Binding Complex Reveal RNA Matchmaking Mechanism.
Cell(Cambridge,Mass.), 126, 2006
1UPF
DownloadVisualize
BU of 1upf by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V BOUND TO THE DRUG 5-FLUOROURACIL
分子名称: 5-FLUOROURACIL, SULFATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE
著者Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
登録日1998-06-17
公開日1999-06-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
1LII
DownloadVisualize
BU of 1lii by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE 2 AND AMP-PCP
分子名称: ADENOSINE, CHLORIDE ION, MAGNESIUM ION, ...
著者Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
登録日2002-04-17
公開日2002-05-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LIJ
DownloadVisualize
BU of 1lij by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO PRODRUG 2 7-IODOTUBERCIDIN AND AMP-PCP
分子名称: 2-RIBOFURANOSYL-3-IODO-2,3-DIHYDRO-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, CHLORIDE ION, MAGNESIUM ION, ...
著者Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
登録日2002-04-17
公開日2002-05-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LIK
DownloadVisualize
BU of 1lik by Molmil
STRUCTURE OF T. GONDII ADENOSINE KINASE BOUND TO ADENOSINE
分子名称: ADENOSINE, CHLORIDE ION, SULFATE ION, ...
著者Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Roos, D.S, Ullman, B, Brennan, R.G.
登録日2002-04-17
公開日2002-05-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1LIO
DownloadVisualize
BU of 1lio by Molmil
STRUCTURE OF APO T. GONDII ADENOSINE KINASE
分子名称: adenosine kinase
著者Schumacher, M.A, Scott, D.M, Mathews, I.I, Ealick, S.E, Brennan, R.G.
登録日2002-04-17
公開日2002-06-12
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Toxoplasma gondii adenosine kinase reveal a novel catalytic mechanism and prodrug binding.
J.Mol.Biol., 298, 2000
1KQ2
DownloadVisualize
BU of 1kq2 by Molmil
Crystal Structure of an Hfq-RNA Complex
分子名称: 5'-R(*AP*UP*UP*UP*UP*UP*G)-3', Host factor for Q beta
著者Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
登録日2002-01-03
公開日2002-07-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
1UPU
DownloadVisualize
BU of 1upu by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V, BOUND TO PRODUCT URIDINE-1-MONOPHOSPHATE (UMP)
分子名称: PHOSPHATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE
著者Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
登録日1998-04-16
公開日1999-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon