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5M11
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BU of 5m11 by Molmil
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
分子名称: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
著者Lasica, A.M, Goulas, T, Mizgalska, D, Zhou, X, Ksiazek, M, Madej, M, Guo, Y, Guevara, T, Nowak, M, Potempa, B, Goel, A, Sztukowska, M, Prabhakar, A.T, Bzowska, M, Widziolek, M, Thogersen, I.B, Enghild, J.J, Simonian, M, Kulczyk, A.W, Nguyen, K.-A, Potempa, J, Gomis-Ruth, F.X.
登録日2016-10-07
公開日2016-11-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Sci Rep, 6, 2016
1SZS
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BU of 1szs by Molmil
The structure of gamma-aminobutyrate aminotransferase mutant: I50Q
分子名称: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-aminobutyrate aminotransferase, ...
著者Liu, W, Peterson, P.E, Langston, J.A, Jin, X, Zhou, X, Fisher, A.J, Toney, M.D.
登録日2004-04-06
公開日2005-03-01
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Kinetic and Crystallographic Analysis of Active Site Mutants of Escherichia coligamma-Aminobutyrate Aminotransferase.
Biochemistry, 44, 2005
1SZU
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BU of 1szu by Molmil
The structure of gamma-aminobutyrate aminotransferase mutant: V241A
分子名称: 1,2-ETHANEDIOL, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-aminobutyrate aminotransferase, ...
著者Liu, W, Peterson, P.E, Langston, J.A, Jin, X, Zhou, X, Fisher, A.J, Toney, M.D.
登録日2004-04-06
公開日2005-03-01
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2.52 Å)
主引用文献Kinetic and Crystallographic Analysis of Active Site Mutants of Escherichia coligamma-Aminobutyrate Aminotransferase.
Biochemistry, 44, 2005
6LH0
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BU of 6lh0 by Molmil
Crystal structure of a cysteine-pair mutant (P10C-S291C) of a bacterial bile acid transporter in an inward-facing apo-state
分子名称: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Transporter, sodium/bile acid symporter family
著者Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X.
登録日2019-12-06
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.812 Å)
主引用文献Substrate binding in the bile acid transporter ASBT Yf from Yersinia frederiksenii.
Acta Crystallogr D Struct Biol, 77, 2021
6LGZ
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Crystal structure of a cysteine-pair mutant (P10C-S291C) of a bacterial bile acid transporter in an inward-facing state complexed with sulfate
分子名称: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, SULFATE ION, Transporter, ...
著者Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X.
登録日2019-12-06
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.428 Å)
主引用文献Substrate binding in the bile acid transporter ASBT Yf from Yersinia frederiksenii.
Acta Crystallogr D Struct Biol, 77, 2021
6LH1
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BU of 6lh1 by Molmil
Crystal structure of a cysteine-pair mutant (Y113C-P190C) of a bacterial bile acid transporter trapped in an outward-facing conformation
分子名称: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CITRIC ACID, Transporter, ...
著者Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X.
登録日2019-12-06
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.861 Å)
主引用文献An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter.
Acta Crystallogr D Struct Biol, 77, 2021
6LGV
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BU of 6lgv by Molmil
Crystal structure of a cysteine-pair mutant (P10C-S291C) of a bacterial bile acid transporter in an inward-facing state complexed with citrate
分子名称: 2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CITRIC ACID, Transporter, ...
著者Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X.
登録日2019-12-06
公開日2020-12-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.847 Å)
主引用文献Substrate binding in the bile acid transporter ASBT Yf from Yersinia frederiksenii.
Acta Crystallogr D Struct Biol, 77, 2021
7CYK
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BU of 7cyk by Molmil
Crystal structure of a second cysteine-pair mutant (V110C-I197C) of a bacterial bile acid transporter before disulfide bond formation
分子名称: MERCURY (II) ION, Transporter, sodium/bile acid symporter family
著者Wang, X, Lyu, Y, Ji, Y, Sun, Z, Zhou, X.
登録日2020-09-03
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.785 Å)
主引用文献An engineered disulfide bridge traps and validates an outward-facing conformation in a bile acid transporter.
Acta Crystallogr D Struct Biol, 77, 2021
1SFF
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BU of 1sff by Molmil
Structure of gamma-aminobutyrate aminotransferase complex with aminooxyacetate
分子名称: 1,2-ETHANEDIOL, 4'-DEOXY-4'-ACETYLYAMINO-PYRIDOXAL-5'-PHOSPHATE, 4-aminobutyrate aminotransferase, ...
著者Liu, W, Peterson, P.E, Carter, R.J, Zhou, X, Langston, J.A, Fisher, A.J, Toney, M.D.
登録日2004-02-19
公開日2004-09-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of unbound and aminooxyacetate-bound Escherichia coli gamma-aminobutyrate aminotransferase.
Biochemistry, 43, 2004
1SF2
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Structure of E. coli gamma-aminobutyrate aminotransferase
分子名称: 1,2-ETHANEDIOL, 4-aminobutyrate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
著者Liu, W, Peterson, P.E, Carter, R.J, Zhou, X, Langston, J.A, Fisher, A.J, Toney, M.D.
登録日2004-02-19
公開日2004-09-14
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures of unbound and aminooxyacetate-bound Escherichia coli gamma-aminobutyrate aminotransferase.
Biochemistry, 43, 2004
2F4M
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BU of 2f4m by Molmil
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
分子名称: CHLORIDE ION, UV excision repair protein RAD23 homolog B, ZINC ION, ...
著者Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
登録日2005-11-23
公開日2006-03-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
2F4O
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BU of 2f4o by Molmil
The Mouse PNGase-HR23 Complex Reveals a Complete Remodulation of the Protein-Protein Interface Compared to its Yeast Orthologs
分子名称: CHLORIDE ION, PHQ-VAL-ALA-ASP-CF0, XP-C repair complementing complex 58 kDa protein, ...
著者Zhao, G, Zhou, X, Wang, L, Kisker, C, Lennarz, W.J, Schindelin, H.
登録日2005-11-23
公開日2006-03-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
8W4E
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BU of 8w4e by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands (C2 form)
分子名称: Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.805 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
5U6I
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BU of 5u6i by Molmil
Discovery of MLi-2, an Orally Available and Selective LRRK2 Inhibitor that Reduces Brain Kinase Activity
分子名称: 3-[2-(morpholin-4-yl)pyridin-4-yl]-5-[(propan-2-yl)oxy]-1H-indazole, Mitogen-activated protein kinase 1, SULFATE ION
著者Scott, J.D, DeMong, D.E, Fell, M.J, Mirescu, C, Basu, K, Greshock, T.J, Morrow, J.A, Xiao, L, Hruza, A, Harris, J, Tiscia, H.E, Chang, R.K, Embrey, M.W, McCauley, J.A, Li, W, Lin, S, Liu, H, Dai, X, Baptista, M, Agnihotri, G, Columbus, J, Mei, H, Poirier, M, Zhou, X, Lin, Y, Yin, Z, Sanders, J.M, Drolet, R.E, Kern, J.T, Kennedy, M.E, Parker, E.M, Stamford, A.W, Nargund, R, Miller, M.W.
登録日2016-12-08
公開日2017-03-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Discovery of a 3-(4-Pyrimidinyl) Indazole (MLi-2), an Orally Available and Selective Leucine-Rich Repeat Kinase 2 (LRRK2) Inhibitor that Reduces Brain Kinase Activity.
J. Med. Chem., 60, 2017
8W4D
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BU of 8w4d by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands
分子名称: Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.173 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8W4C
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BU of 8w4c by Molmil
The sigma-1 receptor from Xenopus laevis in complex with progesterone by soaking
分子名称: PROGESTERONE, Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.676 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8W4B
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BU of 8w4b by Molmil
The sigma-1 receptor from Xenopus laevis in complex with progesterone by co-crystallization
分子名称: PROGESTERONE, Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2023-08-23
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.152 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8WWB
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BU of 8wwb by Molmil
The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (I432 form)
分子名称: 17-oxoandrost-5-en-3beta-yl hydrogen sulfate, Sigma non-opioid intracellular receptor 1
著者Fu, C, Sun, Z, Zhou, X.
登録日2023-10-25
公開日2024-07-17
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8WUE
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BU of 8wue by Molmil
The sigma-1 receptor from Xenopus laevis in complex with dehydroepiandrosterone sulfate by soaking (C2 form)
分子名称: 17-oxoandrost-5-en-3beta-yl hydrogen sulfate, Sigma non-opioid intracellular receptor 1
著者Fu, C, Sun, Z, Zhou, X.
登録日2023-10-20
公開日2024-07-17
実験手法X-RAY DIFFRACTION (3.089 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8YBB
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BU of 8ybb by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis with side opening
分子名称: Sigma non-opioid intracellular receptor 1
著者Xiao, Y, Fu, C, Sun, Z, Zhou, X.
登録日2024-02-12
公開日2024-07-17
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
5TJA
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BU of 5tja by Molmil
I-II linker of TRPML1 channel at pH 6
分子名称: Mucolipin-1
著者Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
登録日2016-10-04
公開日2017-01-25
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
5TJC
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I-II linker of TRPML1 channel at pH 7.5
分子名称: Mucolipin-1
著者Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
登録日2016-10-04
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
5TJB
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I-II linker of TRPML1 channel at pH 4.5
分子名称: Mucolipin-1
著者Li, M, Zhang, W.K, Benvin, N.M, Zhou, X, Su, D, Li, H, Wang, S, Michailidis, I.E, Tong, L, Li, X, Yang, J.
登録日2016-10-04
公開日2017-01-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of dual Ca(2+)/pH regulation of the endolysosomal TRPML1 channel.
Nat. Struct. Mol. Biol., 24, 2017
3ESW
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BU of 3esw by Molmil
Complex of yeast PNGase with GlcNAc2-IAc.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase, UV excision repair protein RAD23, ...
著者Zhao, G, Zhou, X, Lennarz, W.J, Schindelin, H.
登録日2008-10-06
公開日2008-11-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural and mutational studies on the importance of oligosaccharide binding for the activity of yeast PNGase.
Glycobiology, 19, 2009
3HH7
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Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
分子名称: Muscarinic toxin-like protein 3 homolog
著者Roy, A, Zhou, X, Chong, M.Z, D'hoedt, D, Foo, C.S, Rajagopalan, N, Nirthanan, S, Bertrand, D, Sivaraman, J, Kini, R.M.
登録日2009-05-15
公開日2010-01-12
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural and Functional Characterization of a Novel Homodimeric Three-finger Neurotoxin from the Venom of Ophiophagus hannah (King Cobra)
J.Biol.Chem., 285, 2010

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