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6LY9
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The membrane-embedded Vo domain of V/A-ATPase from Thermus thermophilus
分子名称: V-type ATP synthase subunit C, V-type ATP synthase subunit E, V-type ATP synthase subunit I, ...
著者Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2020-02-13
公開日2020-09-09
最終更新日2020-09-30
実験手法ELECTRON MICROSCOPY (3.93 Å)
主引用文献Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
3W8Q
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BU of 3w8q by Molmil
Structure of the Human Mitogen-Activated Protein Kinase Kinase 1 (MEK1)
分子名称: Dual specificity mitogen-activated protein kinase kinase 1, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Nakae, S, Kitamura, M, Shirai, T, Tada, T.
登録日2013-03-20
公開日2014-03-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of mitogen-activated protein kinase kinase 1 in the DFG-out conformation.
Acta Crystallogr.,Sect.F, 77, 2021
3W9A
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BU of 3w9a by Molmil
Crystal structure of the catalytic domain of the glycoside hydrolase family 131 protein from Coprinopsis cinerea
分子名称: GLYCEROL, Putative uncharacterized protein
著者Miyazaki, T, Tanaka, Y, Tamura, M, Yoshida, M, Nishikawa, A, Tonozuka, T.
登録日2013-04-01
公開日2013-05-22
最終更新日2013-07-10
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal structure of the N-terminal domain of a glycoside hydrolase family 131 protein from Coprinopsis cinerea
Febs Lett., 587, 2013
3VY2
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BU of 3vy2 by Molmil
N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Takagi, R, Nakanishi, T, Kitamura, M.
登録日2012-09-21
公開日2013-09-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of N33D mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VQT
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BU of 3vqt by Molmil
Crystal structure analysis of the translation factor RF3
分子名称: GUANOSINE-5'-DIPHOSPHATE, Peptide chain release factor 3
著者Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
登録日2012-03-30
公開日2012-09-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VR1
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BU of 3vr1 by Molmil
Crystal structure analysis of the translation factor RF3
分子名称: GUANOSINE-5',3'-TETRAPHOSPHATE, Peptide chain release factor 3
著者Kihira, K, Shomura, Y, Shibata, N, Kitamura, M, Higuchi, Y.
登録日2012-04-03
公開日2012-09-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure analysis of the translation factor RF3 (release factor 3)
Febs Lett., 586, 2012
3VYA
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BU of 3vya by Molmil
W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Takagi, R, Nakanishi, T, Kitamura, M.
登録日2012-09-22
公開日2013-09-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of W32Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
3VV1
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Crystal Structure of Caenorhabditis elegans galectin LEC-6
分子名称: MAGNESIUM ION, Protein LEC-6, beta-D-galactopyranose-(1-4)-alpha-L-fucopyranose
著者Makyio, H, Takeuchi, T, Tamura, M, Nishiyama, K, Takahashi, H, Natsugari, H, Arata, Y, Kasai, K, Yamada, Y, Wakatsuki, S, Kato, R.
登録日2012-07-10
公開日2013-05-22
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of preferential binding of fucose-containing saccharide by the Caenorhabditis elegans galectin LEC-6
Glycobiology, 23, 2013
3VY5
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N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Takagi, R, Nakanishi, T, Kitamura, M.
登録日2012-09-21
公開日2013-09-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of N33Q mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
To be Published
1FLM
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BU of 1flm by Molmil
DIMER OF FMN-BINDING PROTEIN FROM DESULFOVIBRIO VULGARIS (MIYAZAKI F)
分子名称: FLAVIN MONONUCLEOTIDE, PROTEIN (FMN-BINDING PROTEIN)
著者Suto, K, Kawagoe, K, Shibata, N, Morimoto, K, Higuchi, Y, Kitamura, M, Nakaya, T, Yasuoka, N.
登録日1999-03-10
公開日2000-03-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献How do the x-ray structure and the NMR structure of FMN-binding protein differ?
Acta Crystallogr.,Sect.D, 56, 2000
1WLK
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BU of 1wlk by Molmil
L122E mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Shibata, N, Higuchi, Y.
登録日2004-06-28
公開日2005-07-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
1WLI
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BU of 1wli by Molmil
L122Y mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Shibata, N, Higuchi, Y.
登録日2004-06-28
公開日2005-07-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis.
J.Biochem., 141, 2007
3A20
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BU of 3a20 by Molmil
L122K mutant of FMN-binding protein from Desulfovibrio vulgaris (Miyazaki F)
分子名称: FLAVIN MONONUCLEOTIDE, FMN-binding protein
著者Shibata, N, Higuchi, Y.
登録日2009-04-27
公開日2009-05-19
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Determination of the role of the Carboxyl-terminal leucine-122 in FMN-binding protein by mutational and structural analysis
J.Biochem., 141, 2007
2NTA
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BU of 2nta by Molmil
Crystal Structure of PTP1B-inhibitor Complex
分子名称: 5-(4-CHLORO-5-PHENYL-3-THIENYL)-1,2,5-THIADIAZOLIDIN-3-ONE 1,1-DIOXIDE, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W, Follows, B.
登録日2006-11-07
公開日2007-04-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Probing acid replacements of thiophene PTP1B inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
2NT7
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BU of 2nt7 by Molmil
Crystal structure of PTP1B-inhibitor complex
分子名称: Tyrosine-protein phosphatase non-receptor type 1, {[5-(3-{[1-(BENZYLSULFONYL)PIPERIDIN-4-YL]AMINO}PHENYL)-4-BROMO-2-(2H-TETRAZOL-5-YL)-3-THIENYL]OXY}ACETIC ACID
著者Xu, W, Follows, B.
登録日2006-11-07
公開日2007-04-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Probing acid replacements of thiophene PTP1B inhibitors.
Bioorg.Med.Chem.Lett., 17, 2007
2QBQ
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BU of 2qbq by Molmil
Crystal structure of ptp1b-inhibitor complex
分子名称: 4-BROMO-3-(CARBOXYMETHOXY)-5-{3-[(3,3,5,5-TETRAMETHYLCYCLOHEXYL)AMINO]PHENYL}THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W.
登録日2007-06-18
公開日2008-03-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase 1B inhibitors: from the active site to the second phosphotyrosine binding site.
J.Med.Chem., 50, 2007
2QBR
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Crystal structure of ptp1b-inhibitor complex
分子名称: 5-[3-(BENZYLAMINO)PHENYL]-4-BROMO-3-(CARBOXYMETHOXY)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W.
登録日2007-06-18
公開日2008-03-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase 1B inhibitors: from the active site to the second phosphotyrosine binding site.
J.Med.Chem., 50, 2007
2QBP
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BU of 2qbp by Molmil
Crystal structure of ptp1b-inhibitor complex
分子名称: 5-(3-{[1-(BENZYLSULFONYL)PIPERIDIN-4-YL]AMINO}PHENYL)-4-BROMO-3-(CARBOXYMETHOXY)THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W.
登録日2007-06-18
公開日2008-03-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase 1B inhibitors: from the active site to the second phosphotyrosine binding site.
J.Med.Chem., 50, 2007
2QBS
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BU of 2qbs by Molmil
Crystal structure of ptp1b-inhibitor complex
分子名称: 4-BROMO-3-(CARBOXYMETHOXY)-5-[3-(CYCLOHEXYLAMINO)PHENYL]THIOPHENE-2-CARBOXYLIC ACID, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W.
登録日2007-06-18
公開日2008-03-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase 1B inhibitors: from the active site to the second phosphotyrosine binding site.
J.Med.Chem., 50, 2007
8ID2
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BU of 8id2 by Molmil
Crystal structure of the ubiquitin-like domain in the SF3A1 subunit of human U2 snRNP complexed with the stem-loop 4 of U1 snRNA
分子名称: RNA (5'-R(*GP*GP*GP*GP*AP*CP*UP*GP*CP*GP*UP*UP*CP*GP*CP*GP*CP*UP*UP*UP*CP*CP*CP*C)-3'), Splicing factor 3A subunit 1
著者Terawaki, S, Nameki, N, Kuwasako, K.
登録日2023-02-12
公開日2023-05-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into recognition of SL4, the UUCG stem-loop, of human U1 snRNA by the ubiquitin-like domain, including the C-terminal tail in the SF3A1 subunit of U2 snRNP.
J.Biochem., 174, 2023
2IW4
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BU of 2iw4 by Molmil
CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP
分子名称: FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ...
著者Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
登録日2006-06-26
公開日2006-11-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase.
J.Biol.Chem., 282, 2007
2ZN7
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CRYSTAL STRUCTURES OF PTP1B-Inhibitor Complexes
分子名称: 4-bromo-3-(carboxymethoxy)-5-{3-[cyclohexyl(phenylcarbonyl)amino]phenyl}thiophene-2-carboxylic acid, Tyrosine-protein phosphatase non-receptor type 1
著者Xu, W, Wu, J.
登録日2008-04-22
公開日2008-10-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase-1 B inhibitors: capturing interactions with arginine 24
Chemmedchem, 3, 2008
2ZMM
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BU of 2zmm by Molmil
Crystal structure of PTP1B-inhibitor complex
分子名称: 4-bromo-3-(carboxymethoxy)-5-{3-[cyclohexyl(methylcarbamoyl)amino]phenyl}thiophene-2-carboxylic acid, CHLORIDE ION, MAGNESIUM ION, ...
著者Xu, W, Wu, J.
登録日2008-04-19
公開日2008-10-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure-based optimization of protein tyrosine phosphatase-1 B inhibitors: capturing interactions with arginine 24
Chemmedchem, 3, 2008
5OPQ
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A 3,6-anhydro-D-galactosidase produced by Zobellia galactanivorans. This is an exo-lytic enzyme that hydrolyzes terminal 3,6-anhydro-D-galactose from the non-reducing end of carrageenan oligosaccharides.
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3,6-anhydro-D-galactosidase, ...
著者Ficko-Blean, E, Michel, G, Czjzek, M.
登録日2017-08-10
公開日2017-11-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017
5OLC
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Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans
分子名称: Galactonate dehydratase, MAGNESIUM ION
著者Michel, G, Czjzek, M, Jam, M.
登録日2017-07-27
公開日2017-12-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.
Nat Commun, 8, 2017

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