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3P78
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BU of 3p78 by Molmil
P38 inhibitor-bound
分子名称: 1-{5-tert-butyl-3-[(1,1-dioxidothiomorpholin-4-yl)carbonyl]thiophen-2-yl}-3-naphthalen-2-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
3P7B
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p38 inhibitor-bound
分子名称: 1-{5-tert-butyl-3-[(5-oxo-1,4-diazepan-1-yl)carbonyl]thiophen-2-yl}-3-naphthalen-1-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
3P79
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P38 inhibitor-bound
分子名称: 1-{3-tert-butyl-1-[2-(1,1-dioxidothiomorpholin-4-yl)-2-oxoethyl]-1H-pyrazol-5-yl}-3-naphthalen-2-ylurea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
著者Moffett, K.K, Namboodiri, H.
登録日2010-10-12
公開日2011-10-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of a novel class of non-ATP site DFG-out state p38 inhibitors utilizing computationally assisted virtual fragment-based drug design (vFBDD).
Bioorg.Med.Chem.Lett., 21, 2011
1YGU
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BU of 1ygu by Molmil
Crystal structure of the tandem phosphatase domains of RPTP CD45 with a pTyr peptide
分子名称: Leukocyte common antigen, Polyoma Middle T antigen
著者Nam, H, Poy, F, Saito, H, Frederick, C.A.
登録日2005-01-05
公開日2005-02-22
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis for the function and regulation of the receptor protein tyrosine phosphatase CD45.
J.Exp.Med., 201, 2005
2JMK
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BU of 2jmk by Molmil
Solution structure of ta0956
分子名称: Hypothetical protein Ta0956
著者Koo, B, Jung, J, Jung, H, Nam, H, Kim, Y, Yee, A, Arrowsmith, C.H, Lee, W.
登録日2006-11-20
公開日2007-10-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution structure of the hypothetical novel-fold protein TA0956 from Thermoplasma acidophilum
Proteins, 69, 2007
6S1X
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X-ray structure of human glutamate carboxypeptidase II (GCPII)-E424M inactive mutant, in complex with a inhibitor KB1160
分子名称: (2~{S})-2-[[(3~{S})-3-[3-[(4-iodophenyl)carbonylamino]propanoylamino]-4-oxidanyl-4-oxidanylidene-butyl]carbamoylamino]pentanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Barinka, C, Kutil, Z.
登録日2019-06-19
公開日2020-05-13
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Novel beta- and gamma-Amino Acid-Derived Inhibitors of Prostate-Specific Membrane Antigen.
J.Med.Chem., 63, 2020
6RBC
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BU of 6rbc by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a inhibitor KB1157
分子名称: (2~{S})-2-[[(2~{R})-2-[4-[(4-iodophenyl)carbonylamino]butanoylamino]-3-oxidanyl-3-oxidanylidene-propyl]carbamoylamino]pentanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Barinka, C, Kutil, Z.
登録日2019-04-10
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Novel beta- and gamma-Amino Acid-Derived Inhibitors of Prostate-Specific Membrane Antigen.
J.Med.Chem., 63, 2020
8GZC
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Crystal structure of EP300 HAT domain in complex with compound 10
分子名称: (2~{R},4~{R})-4-fluoranyl-1-[1-(4-methoxyphenyl)cyclohexyl]carbonyl-~{N}-(1~{H}-pyrazolo[4,3-b]pyridin-5-yl)pyrrolidine-2-carboxamide, Histone acetyltransferase p300, ZINC ION
著者Takahashi, M, Hanzawa, H.
登録日2022-09-26
公開日2023-01-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of DS-9300: A Highly Potent, Selective, and Once-Daily Oral EP300/CBP Histone Acetyltransferase Inhibitor.
J.Med.Chem., 66, 2023
3ABZ
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BU of 3abz by Molmil
Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus
分子名称: Beta-glucosidase I, GLYCEROL
著者Yoshida, E, Hidaka, M, Fushinobu, S, Katayama, T, Kumagai, H.
登録日2009-12-25
公開日2010-08-11
最終更新日2013-10-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Role of a PA14 domain in determining substrate specificity of a glycoside hydrolase family 3 beta-glucosidase from Kluyveromyces marxianus.
Biochem.J., 431, 2010
3AC0
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BU of 3ac0 by Molmil
Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose
分子名称: Beta-glucosidase I, beta-D-glucopyranose
著者Yoshida, E, Hidaka, M, Fushinobu, S, Katayama, T, Kumagai, H.
登録日2009-12-25
公開日2010-08-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Role of a PA14 domain in determining substrate specificity of a glycoside hydrolase family 3 beta-glucosidase from Kluyveromyces marxianus.
Biochem.J., 431, 2010
7UJ4
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BU of 7uj4 by Molmil
Inhibition of Human Menin by SNDX-5613
分子名称: 2-({4-[7-({(1r,4r)-4-[(ethanesulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N-ethyl-5-fluoro-N-(propan-2-yl)benzamide, Isoform 2 of Menin, MAGNESIUM ION
著者McKeever, B.M, Kulkarni, S, McGeehan, G.M.
登録日2022-03-30
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献MEN1 mutations mediate clinical resistance to menin inhibition.
Nature, 615, 2023
7K15
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Crystal structure of the Human Leukotriene B4 Receptor 1 in Complex with Selective Antagonist MK-D-046
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, FLAVIN MONONUCLEOTIDE, HEXAETHYLENE GLYCOL, ...
著者Michaelian, N, Han, G.W, Cherezov, V.
登録日2020-09-07
公開日2021-02-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Structural insights on ligand recognition at the human leukotriene B4 receptor 1.
Nat Commun, 12, 2021
5AZ4
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BU of 5az4 by Molmil
Crystal structure of a 79KDa fragment of FlgE, the hook protein from Campylobacter jejuni
分子名称: Flagellar hook subunit protein
著者Samatey, F.A, Kido, Y.
登録日2015-09-25
公開日2016-10-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural insights into bacterial flagellar hooks similarities and specificities.
Sci Rep, 6, 2016
5ZE9
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BU of 5ze9 by Molmil
Crystal structure of AMP-PNP bound mutant A3B3 complex from Enterococcus hirae V-ATPase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
著者Maruyama, S, Suzuki, K, Sasaki, H, Mizutani, K, Saito, Y, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Ichiro, Y, Murata, T.
登録日2018-02-27
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Metastable asymmetrical structure of a shaftless V1motor.
Sci Adv, 5, 2019
6JZJ
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Structure of FimA type-2 (FimA2) prepilin of the type V major fimbrium
分子名称: Major fimbrium subunit FimA type-2, SULFATE ION
著者Okada, K, Shoji, M, Nakayam, K, Imada, K.
登録日2019-05-02
公開日2020-04-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange.
Nat Microbiol, 5, 2020
8E90
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Inhibition of Human Menin by SNDX-5613
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-({4-[7-({(1r,4r)-4-[(ethanesulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N-ethyl-5-fluoro-N-(propan-2-yl)benzamide, ...
著者McKeever, B.M, KULKARNI, S, McGeehan, G.M.
登録日2022-08-26
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MEN1 mutations mediate clinical resistance to menin inhibition.
Nature, 615, 2023
8F76
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BU of 8f76 by Molmil
Human olfactory receptor OR51E2 bound to propionate in complex with miniGs399
分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
著者Billesboelle, C.B, Manglik, A.
登録日2022-11-18
公開日2023-03-22
最終更新日2023-04-05
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of odorant recognition by a human odorant receptor.
Nature, 615, 2023
5ZEA
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Crystal structure of the nucleotide-free mutant A3B3
分子名称: GLYCEROL, V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
著者Maruyama, S, Suzuki, K, Mizutani, K, Saito, Y, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Ichiro, Y, Murata, T.
登録日2018-02-27
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.384 Å)
主引用文献Metastable asymmetrical structure of a shaftless V1motor.
Sci Adv, 5, 2019
6JZK
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BU of 6jzk by Molmil
Structure of FimA type-1 (FimA1) prepilin of the type V major fimbrium
分子名称: GLYCEROL, Major fimbrium subunit FimA type-1, S,R MESO-TARTARIC ACID, ...
著者Okada, K, Shoji, M, Nakayam, K, Imada, K.
登録日2019-05-02
公開日2020-04-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of polymerized type V pilin reveals assembly mechanism involving protease-mediated strand exchange.
Nat Microbiol, 5, 2020
1AVK
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CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
分子名称: AMINE OXIDASE
著者Wilce, M.C.J, Guss, J.M, Freeman, H.C, Tanizawa, K, Yamaguchi, H.
登録日1997-09-16
公開日1998-03-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the copper-containing amine oxidase from Arthrobacter globiformis in the holo and apo forms: implications for the biogenesis of topaquinone.
Biochemistry, 36, 1997
1AV4
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CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
分子名称: AMINE OXIDASE, COPPER (II) ION
著者Wilce, M.C.J, Guss, J.M, Freeman, H.C.
登録日1997-09-24
公開日1998-03-25
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the copper-containing amine oxidase from Arthrobacter globiformis in the holo and apo forms: implications for the biogenesis of topaquinone.
Biochemistry, 36, 1997
1AVL
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CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
分子名称: AMINE OXIDASE, COPPER (II) ION
著者Wilce, M.C.J, Guss, J.M, Freeman, H.C.
登録日1997-09-17
公開日1998-03-18
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structures of the copper-containing amine oxidase from Arthrobacter globiformis in the holo and apo forms: implications for the biogenesis of topaquinone.
Biochemistry, 36, 1997
3B1S
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BU of 3b1s by Molmil
Crystal structure of the cytoplasmic domain of FlhB from Aquifex aeolicus
分子名称: Flagellar biosynthetic protein flhB
著者Meshcheryakov, V.A, Samatey, F.A.
登録日2011-07-08
公開日2012-07-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Inhibition of a type III secretion system by the deletion of a short loop in one of its membrane proteins
Acta Crystallogr.,Sect.D, 69, 2013
3B0Z
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Crystal structure of cytoplasmic domain of FlhB from Salmonella typhimurium
分子名称: Flagellar biosynthetic protein flhB, SODIUM ION, ZINC ION
著者Meshcheryakov, V.A, Samatey, F.A.
登録日2011-06-17
公開日2012-06-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Inhibition of a type III secretion system by the deletion of a short loop in one of its membrane proteins
Acta Crystallogr.,Sect.D, 69, 2013
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