Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7YHL
DownloadVisualize
BU of 7yhl by Molmil
Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with free phosphate
分子名称: CRISPR system ring nuclease SSO2081, PHOSPHATE ION
著者Lin, Z, Du, L, Luo, Z.
登録日2022-07-13
公開日2023-02-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of stepwise cyclic tetra-adenylate cleavage by the type III CRISPR ring nuclease Crn1/Sso2081.
Nucleic Acids Res., 51, 2023
7YGH
DownloadVisualize
BU of 7ygh by Molmil
Crystal Structure of the ring nuclease Sso2081 from Saccharolobus solfataricus in complex with cyclic-tetraadenylate (cA4)
分子名称: CRISPR system ring nuclease SSO2081, RNA (5'-R(P*AP*AP*AP*A)-3')
著者Lin, Z, Du, L, Luo, Z.
登録日2022-07-11
公開日2023-02-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Molecular basis of stepwise cyclic tetra-adenylate cleavage by the type III CRISPR ring nuclease Crn1/Sso2081.
Nucleic Acids Res., 51, 2023
5Z6Q
DownloadVisualize
BU of 5z6q by Molmil
Crystal structure of AAA of Spastin
分子名称: CHLORIDE ION, Spastin
著者Lin, Z, Wang, C, Shen, Y.
登録日2018-01-25
公開日2018-12-05
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The AAA protein spastin possesses two levels of basal ATPase activity
FEBS Lett., 592, 2018
5ZGG
DownloadVisualize
BU of 5zgg by Molmil
NMR structure of p75NTR transmembrane domain in complex with NSC49652
分子名称: (2E)-1-(2-hydroxyphenyl)-3-(pyridin-3-yl)prop-2-en-1-one, Tumor necrosis factor receptor superfamily member 16
著者Lin, Z, Ibanez, C.
登録日2018-03-08
公開日2019-03-13
最終更新日2024-11-13
実験手法SOLUTION NMR
主引用文献A Small Molecule Targeting the Transmembrane Domain of Death Receptor p75NTRInduces Melanoma Cell Death and Reduces Tumor Growth.
Cell Chem Biol, 25, 2018
3UB2
DownloadVisualize
BU of 3ub2 by Molmil
TIR domain of Mal/TIRAP
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Toll/interleukin-1 receptor domain-containing adapter protein
著者Shen, Y, Lin, Z.
登録日2011-10-23
公開日2012-05-16
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insights into TIR Domain Specificity of the Bridging Adaptor Mal in TLR4 Signaling
Plos One, 7, 2012
7DFE
DownloadVisualize
BU of 7dfe by Molmil
NMR structure of TuSp2-RP
分子名称: B6 protein
著者Lin, Z, Fan, T, Fan, J.
登録日2020-11-07
公開日2021-11-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献1H, 15N and 13C resonance assignments of a repetitive domain of tubuliform spidroin 2
Biomol.Nmr Assign., 15, 2021
7CSQ
DownloadVisualize
BU of 7csq by Molmil
Solution structure of the complex between p75NTR-DD and TRADD-DD
分子名称: Tumor necrosis factor receptor superfamily member 16, Tumor necrosis factor receptor type 1-associated DEATH domain protein
著者Lin, Z, Zhang, N.
登録日2020-08-16
公開日2021-08-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis of NF-kappa B signaling by the p75 neurotrophin receptor interaction with adaptor protein TRADD through their respective death domains.
J.Biol.Chem., 297, 2021
7X5B
DownloadVisualize
BU of 7x5b by Molmil
Crystal structure of RuvB
分子名称: ADENOSINE-5'-DIPHOSPHATE, Holliday junction ATP-dependent DNA helicase RuvB
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z, Dai, L.
登録日2022-03-04
公開日2023-03-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X5A
DownloadVisualize
BU of 7x5a by Molmil
CryoEM structure of RuvA-Holliday junction complex
分子名称: DNA (26-MER), Holliday junction ATP-dependent DNA helicase RuvA
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-04
公開日2023-03-08
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X7P
DownloadVisualize
BU of 7x7p by Molmil
CryoEM structure of dsDNA-RuvB-RuvA domain3 complex
分子名称: DNA, Holliday junction ATP-dependent DNA helicase RuvA, Holliday junction ATP-dependent DNA helicase RuvB
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-10
公開日2023-03-15
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (7.02 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
7X7Q
DownloadVisualize
BU of 7x7q by Molmil
CryoEM structure of RuvA-RuvB-Holliday junction complex
分子名称: DNA (26-MER), DNA (40-MER), Holliday junction ATP-dependent DNA helicase RuvA, ...
著者Lin, Z, Qu, Q, Zhang, X, Zhou, Z.
登録日2022-03-10
公開日2023-03-15
最終更新日2023-09-20
実験手法ELECTRON MICROSCOPY (7.02 Å)
主引用文献Cryo-EM structure of the RuvAB-Holliday junction intermediate complex from Pseudomonas aeruginosa.
Front Plant Sci, 14, 2023
4HRV
DownloadVisualize
BU of 4hrv by Molmil
Crystal Structure of Lipoprotein GNA1162 from Neisseria meningitidis
分子名称: Putative lipoprotein GNA1162
著者Lin, Z, Cai, X, Shen, Y.
登録日2012-10-28
公開日2013-04-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structure of Neisseria meningitidis lipoprotein GNA1162
Acta Crystallogr.,Sect.F, 69, 2013
2VTF
DownloadVisualize
BU of 2vtf by Molmil
X-ray crystal structure of the Endo-beta-N-acetylglucosaminidase from Arthrobacter protophormiae E173Q mutant reveals a TIM barrel catalytic domain and two ancillary domains
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ENDO-BETA-N-ACETYLGLUCOSAMINIDASE, TRIETHYLENE GLYCOL
著者Ling, Z, Bingham, R.J, Suits, M.D.L, Moir, J.W.B, Fairbanks, A.J, Taylor, E.J.
登録日2008-05-14
公開日2009-03-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The X-Ray Crystal Structure of an Arthrobacter Protophormiae Endo-Beta-N-Acetylglucosaminidase Reveals a (Beta/Alpha)(8) Catalytic Domain, Two Ancillary Domains and Active Site Residues Key for Transglycosylation Activity.
J.Mol.Biol., 389, 2009
6LW3
DownloadVisualize
BU of 6lw3 by Molmil
Crystal structure of RuvC from Pseudomonas aeruginosa
分子名称: Crossover junction endodeoxyribonuclease RuvC
著者Hu, Y, He, Y, Lin, Z.
登録日2020-02-07
公開日2020-02-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Biochemical and structural characterization of the Holliday junction resolvase RuvC from Pseudomonas aeruginosa.
Biochem.Biophys.Res.Commun., 525, 2020
8HQ2
DownloadVisualize
BU of 8hq2 by Molmil
Crystal structure of human ADAM22 in complex with human LGI1 mutant
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ...
著者Liu, H, Lin, Z, Xu, F.
登録日2022-12-13
公開日2023-12-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Crystal structure of human ADAM22 in complex with human LGI1 mutant
To Be Published
4XSK
DownloadVisualize
BU of 4xsk by Molmil
Structure of PAItrap, an uPA mutant
分子名称: GLYCEROL, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Gong, L, Proulle, V, Hong, Z, Lin, Z, Liu, M, Yuan, C, Lin, L, Furie, B, Flaumenhaft, R, Andreasen, P, Furie, B, Huang, M.
登録日2015-01-22
公開日2016-02-03
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of PAItrap, an uPA mutant
To Be Published
4XKL
DownloadVisualize
BU of 4xkl by Molmil
Crystal structure of NDP52 ZF2 in complex with mono-ubiquitin
分子名称: ACETATE ION, Calcium-binding and coiled-coil domain-containing protein 2, GLYCEROL, ...
著者Xie, X, Li, F, Wang, Y, Lin, Z, Chen, X, Liu, J, Pan, L.
登録日2015-01-12
公開日2015-11-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis of ubiquitin recognition by the autophagy receptor CALCOCO2
Autophagy, 11, 2015
6HCF
DownloadVisualize
BU of 6hcf by Molmil
Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
著者Juszkiewicz, S, Chandrasekaran, V, Lin, Z, Kraatz, S, Ramakrishnan, V, Hegde, R.S.
登録日2018-08-14
公開日2018-10-17
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献ZNF598 Is a Quality Control Sensor of Collided Ribosomes.
Mol. Cell, 72, 2018
8GUG
DownloadVisualize
BU of 8gug by Molmil
Structure of VPA0770 toxin bound to VPA0769 antitoxin in Vibrio parahaemolyticus
分子名称: DUF2384 domain-containing protein, RES domain-containing protein
著者Song, X.J, Zhang, Y, Xu, Y.Y, Lin, Z.
登録日2022-09-12
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structural insights of the toxin-antitoxin system VPA0770-VPA0769 in Vibrio parahaemolyticus.
Int.J.Biol.Macromol., 242, 2023
1M8S
DownloadVisualize
BU of 1m8s by Molmil
Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 5.9)
分子名称: 1,4-BUTANEDIOL, CADMIUM ION, phospholipase a2
著者Xu, S, Gu, L, Zhou, Y, Lin, Z.
登録日2002-07-25
公開日2003-02-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio
Biochem.Biophys.Res.Commun., 300, 2003
1M8R
DownloadVisualize
BU of 1m8r by Molmil
Crystal Structures of Cadmium-binding Acidic Phospholipase A2 from the Venom of Agkistrodon halys pallas at 1.9 Resolution (crystal grown at pH 7.4)
分子名称: 1,4-BUTANEDIOL, CADMIUM ION, phospholipase A2
著者Xu, S, Gu, L, Zhou, Y, Lin, Z.
登録日2002-07-25
公開日2003-02-11
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structures of cadmium-binding acidic phospholipase A(2) from the venom of Agkistrodon halys Pallas at 1.9A resolutio
Biochem.Biophys.Res.Commun., 300, 2003
5V6J
DownloadVisualize
BU of 5v6j by Molmil
Glycan binding protein Y3 from mushroom Coprinus comatus possesses anti-leukemic activity
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, TMV resistance protein Y3
著者Li, K, Zhang, P, Gang, Y, Xia, C, Polston, J.E, Li, G, Li, S, Lin, Z, Yang, L.-J, Bruner, S.D, Ding, Y.
登録日2017-03-16
公開日2017-08-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Cytotoxic protein from the mushroom Coprinus comatus possesses a unique mode for glycan binding and specificity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8KFT
DownloadVisualize
BU of 8kft by Molmil
Crystal structure of ZmMOC1 in complex with a nicked Holliday junction soaked in Mn2+ for 15 seconds
分子名称: DNA (25-MER), DNA (33-MER), DNA (5'-D(P*CP*AP*CP*GP*AP*TP*TP*G)-3'), ...
著者Zhang, D, Luo, Z, Lin, Z.
登録日2023-08-16
公開日2024-06-26
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8KFV
DownloadVisualize
BU of 8kfv by Molmil
Crystal structure of ZmMOC1 K229A in complex with a nicked Holliday junction soaked in Mn2+ for 180 seconds
分子名称: 1,2-ETHANEDIOL, DNA (25-MER), DNA (33-MER), ...
著者Zhang, D, Luo, Z, Lin, Z.
登録日2023-08-16
公開日2024-06-26
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024
8KFU
DownloadVisualize
BU of 8kfu by Molmil
Crystal structure of ZmMOC1 in complex with a nicked Holliday junction soaked in Mn2+ for 180 seconds
分子名称: 1,2-ETHANEDIOL, DNA (25-MER), DNA (33-MER), ...
著者Zhang, D, Luo, Z, Lin, Z.
登録日2023-08-16
公開日2024-06-26
最終更新日2024-07-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献MOC1 cleaves Holliday junctions through a cooperative nick and counter-nick mechanism mediated by metal ions.
Nat Commun, 15, 2024

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon