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4NXH
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BU of 4nxh by Molmil
2'-Trifluoromethylthiouridine-modified E. coli 23S rRNA Sarcin Ricin Loop
分子名称: 23S ribosomal RNA Sarcin Ricin Loop, GLYCEROL, SULFATE ION
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-12-09
公開日2014-12-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.158 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
5NQI
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BU of 5nqi by Molmil
E.coli 16S rRNA Sarcin-Ricin Loop containing a 5-hydroxymethylcytosine modification
分子名称: E.Coli 27-mer SRL RNA
著者Ennifar, E, Micura, R.
登録日2017-04-20
公開日2017-07-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.851 Å)
主引用文献Synthesis, Thermodynamic Properties, and Crystal Structure of RNA Oligonucleotides Containing 5-Hydroxymethylcytosine.
J. Org. Chem., 82, 2017
4NMG
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BU of 4nmg by Molmil
2'-Trifluoromethylthio-2'-deoxyuridine-modified SRL
分子名称: 23S ribosomal RNA Sarcin Ricin Loop
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-11-15
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
4NLF
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BU of 4nlf by Molmil
2'-trifluoromethylthio-2'-deoxycytidine-modified SRL
分子名称: 23S ribosomal RNA Sarcin Ricin Loop, SULFATE ION
著者Ennifar, E, Micura, R, Kosutic, M.
登録日2013-11-14
公開日2014-11-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Surprising base pairing and structural properties of 2'-trifluoromethylthio-modified ribonucleic acids.
J.Am.Chem.Soc., 136, 2014
3DVV
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BU of 3dvv by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)
分子名称: CHLORIDE ION, HIV-1 genomic RNA, POTASSIUM ION, ...
著者Ennifar, E, Dumas, P, Olieric, V.
登録日2008-07-21
公開日2008-08-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A fast strategy for Selenium derivatization and phasing of RNA structures
To be Published
9Q87
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BU of 9q87 by Molmil
Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+
分子名称: 16S rRNA, 23S rRNA, 5S rRNA, ...
著者Leonarski, f, Henning-Knechtel, A, Kirmizialtin, S, Ennifar, E, Auffinger, P.
登録日2025-02-23
公開日2025-05-14
実験手法ELECTRON MICROSCOPY (1.55 Å)
主引用文献Principles of ion binding to RNA inferred from the analysis of a 1.55 Angs. resolution bacterial ribosome structure - Part I: Mg2+.
Nucleic Acids Res, 2024
5FUG
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BU of 5fug by Molmil
Crystal structure of a human YL1-H2A.Z-H2B complex
分子名称: HISTONE H2A.Z, HISTONE H2B TYPE 1-J, VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 72 HOMOLOG
著者Latrick, C.M, Marek, M, Ouararhni, K, Papin, C, Stoll, I, Ignatyeva, M, Obri, A, Ennifar, E, Dimitrov, S, Romier, C, Hamiche, A.
登録日2016-01-27
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular Basis and Specificity of H2A.Z-H2B Recognition and Deposition by the Histone Chaperone Yl1
Nat.Struct.Mol.Biol., 23, 2016
3Q4L
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BU of 3q4l by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, SODIUM ION, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4J
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BU of 3q4j by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
3Q4K
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BU of 3q4k by Molmil
Structure of a small peptide ligand bound to E.coli DNA sliding clamp
分子名称: DNA polymerase III subunit beta, peptide ligand
著者Wolff, P, Olieric, V, Briand, J.P, Chaloin, O, Dejaegere, A, Dumas, P, Ennifar, E, Guichard, G, Wagner, J, Burnouf, D.
登録日2010-12-23
公開日2011-12-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure-based design of short peptide ligands binding onto the E. coli processivity ring.
J.Med.Chem., 54, 2011
1DK1
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BU of 1dk1 by Molmil
DETAILED VIEW OF A KEY ELEMENT OF THE RIBOSOME ASSEMBLY: CRYSTAL STRUCTURE OF THE S15-RRNA COMPLEX
分子名称: 30S RIBOSOMAL PROTEIN S15, MAGNESIUM ION, POTASSIUM ION, ...
著者Nikulin, A, Serganov, A, Ennifar, E, Tischenko, S, Nevskaya, N.
登録日1999-12-06
公開日2000-04-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the S15-rRNA complex.
Nat.Struct.Biol., 7, 2000
3DW7
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BU of 3dw7 by Molmil
Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2656-SeCH3 modified
分子名称: Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW5
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BU of 3dw5 by Molmil
Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23S rRNA, U2656-OCH3 modified
分子名称: Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW6
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BU of 3dw6 by Molmil
Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-SECH3 modified
分子名称: GLYCEROL, Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DW4
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BU of 3dw4 by Molmil
Crystal Structure of the Sarcin/Ricin Domain from E. COLI 23 S rRNA, U2650-OCH3 modified
分子名称: GLYCEROL, Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
3DVZ
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BU of 3dvz by Molmil
Crystal Structure of the Sarcin/Ricin Domain from E. coli 23 S rRNA
分子名称: GLYCEROL, Sarcin/Ricin Domain from E. Coli 23 S rRNA
著者Olieric, V, Rieder, U, Lang, K, Serganov, A, Schulze-Briese, C, Micura, R, Dumas, P, Ennifar, E.
登録日2008-07-21
公開日2009-03-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A fast selenium derivatization strategy for crystallization and phasing of RNA structures.
Rna, 15, 2009
4TR7
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BU of 4tr7 by Molmil
Crystal structure of DNA polymerase sliding clamp from Mycobaterium tuberculosis
分子名称: DNA polymerase III subunit beta
著者Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
登録日2014-06-14
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TR8
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BU of 4tr8 by Molmil
Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa
分子名称: DNA polymerase III subunit beta, SODIUM ION
著者Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
登録日2014-06-15
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TR6
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BU of 4tr6 by Molmil
Crystal structure of DNA polymerase sliding clamp from Bacillus subtilis
分子名称: DNA polymerase III subunit beta, SODIUM ION
著者Burnouf, D, Olieric, V, Ennifar, E, Wolff, P.
登録日2014-06-14
公開日2014-09-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
4TSZ
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BU of 4tsz by Molmil
Crystal structure of DNA polymerase sliding clamp from Pseudomonas aeruginosa with ligand
分子名称: ACE-GLN-ALC-ASP-LEU-ZCL peptide, DNA polymerase III subunit beta
著者Olieric, V, Burnouf, D, Ennifar, E, Wolff, P.
登録日2014-06-19
公開日2014-09-10
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
J.Med.Chem., 57, 2014
2QEK
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BU of 2qek by Molmil
HIV-1 subtype F DIS RNA extended duplex form
分子名称: HIV-1 subtype F DIS genomic RNA, MAGNESIUM ION, POTASSIUM ION
著者Freisz, S, Ennifar, E, Dumas, P.
登録日2007-06-26
公開日2008-05-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C44
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BU of 3c44 by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycin
分子名称: CHLORIDE ION, HIV-1 subtype F genomic RNA, PAROMOMYCIN, ...
著者Freisz, S, Ennifar, E, Dumas, P.
登録日2008-01-29
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C5D
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BU of 3c5d by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin
分子名称: 'HIV-1 subtype F genomic RNA, (2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R ,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMET HYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL, POTASSIUM ION
著者Freisz, S, Lang, K, Micura, R, Dumas, P, Ennifar, E.
登録日2008-01-31
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C7R
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BU of 3c7r by Molmil
Crystal Structure of HIV-1 subtype F DIS extended duplex RNA bound to neomycin
分子名称: HIV-1 subtype F genomic RNA, NEOMYCIN, POTASSIUM ION
著者Freisz, S, Lang, K, Micura, R, Dumas, P, Ennifar, E.
登録日2008-02-08
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008
3C3Z
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BU of 3c3z by Molmil
Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin
分子名称: HIV-1 subtype F genomic RNA, RIBOSTAMYCIN
著者Freisz, S, Lang, K, Micura, R, Dumas, P, Ennifar, E.
登録日2008-01-29
公開日2008-05-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Angew.Chem.Int.Ed.Engl., 47, 2008

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