Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5UKO
DownloadVisualize
BU of 5uko by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522IA Fab
分子名称: DH522IA Fab fragment heavy chain, DH522IA Fab fragment light chain
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
8BGN
DownloadVisualize
BU of 8bgn by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Diacetylchitobiose deacetylase, ...
著者Rypniewski, W, Bejger, M, Biniek-Antosiak, K.
登録日2022-10-28
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
8BGO
DownloadVisualize
BU of 8bgo by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus with substrate N,N-diacetylchitobiose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Diacetylchitobiose deacetylase, ZINC ION
著者Rypniewski, W, Bejger, M, Biniek-Antosiak, K.
登録日2022-10-28
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
8BGP
DownloadVisualize
BU of 8bgp by Molmil
N,N-diacetylchitobiose deacetylase from Pyrococcus chitonophagus anomalous data
分子名称: Diacetylchitobiose deacetylase, ZINC ION
著者Rypniewski, W, Biniek-Antosiak, K, Bejger, M.
登録日2022-10-28
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Structural, Thermodynamic and Enzymatic Characterization of N , N -Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus.
Int J Mol Sci, 23, 2022
2ULL
DownloadVisualize
BU of 2ull by Molmil
MULTIPLE CONFORMATION STRUCTURE OF ALPHA-LYTIC PROTEASE AT 120 K
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE
著者Rader, S.D, Agard, D.A.
登録日1996-11-26
公開日1997-07-07
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution.
Protein Sci., 6, 1997
5LXL
DownloadVisualize
BU of 5lxl by Molmil
NMR structure of the N-terminal domain of the Bacteriophage T5 decoration protein pb10
分子名称: Decoration protein
著者Vernhes, E, Gilquin, B, Cuniasse, P, Boulanger, P, Zinn-Justin, S.
登録日2016-09-22
公開日2017-04-19
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献High affinity anchoring of the decoration protein pb10 onto the bacteriophage T5 capsid.
Sci Rep, 7, 2017
6VVJ
DownloadVisualize
BU of 6vvj by Molmil
Cap1G-TPUA
分子名称: RNA (130-MER)
著者Summers, M.F, Brown, J.D.
登録日2020-02-18
公開日2020-04-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for transcriptional start site control of HIV-1 RNA fate.
Science, 368, 2020
6VU1
DownloadVisualize
BU of 6vu1 by Molmil
Cap3G-TAR-F1 is an RNA hairpin. The 1H-1H NOESY data was collected at 308 K in 10 mM KH2PO4 pH 7.4.
分子名称: RNA (34-MER)
著者Summers, M.F, Brown, J.D.
登録日2020-02-14
公開日2020-04-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural basis for transcriptional start site control of HIV-1 RNA fate.
Science, 368, 2020
8A46
DownloadVisualize
BU of 8a46 by Molmil
Crystal structure of the human Kelch domain of Keap1 in complex with compound S217879
分子名称: 2-[(1S,2R,8S)-2,4,32-trimethyl-28,28-bis(oxidanylidene)-19,22,27-trioxa-28$l^{6}-thia-1,14,15,16-tetrazahexacyclo[21.5.3.1^{3,7}.1^{9,13}.0^{12,16}.0^{26,30}]tritriaconta-3(33),4,6,9(32),10,12,14,23,25,30-decaen-8-yl]ethanoic acid, Kelch-like ECH-associated protein 1
著者Weber, C, Vuillard, L, Delerive, P, Miallau, L.
登録日2022-06-10
公開日2022-07-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.323 Å)
主引用文献Selective disruption of NRF2-KEAP1 interaction leads to NASH resolution and reduction of liver fibrosis in mice.
JHEP Rep, 5, 2023
6DE7
DownloadVisualize
BU of 6de7 by Molmil
Crystal Structure at 4.3 A Resolution of Glycosylated HIV-1 Clade A BG505 SOSIP.664 Prefusion Env Trimer with Interdomain Stabilization 113C-429GCG in Complex with Broadly Neutralizing Antibodies PGT122 and 35O22
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 heavy chain, ...
著者Gorman, J, Kwong, P.D.
登録日2018-05-11
公開日2018-06-06
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (4.123 Å)
主引用文献Interdomain Stabilization Impairs CD4 Binding and Improves Immunogenicity of the HIV-1 Envelope Trimer.
Cell Host Microbe, 23, 2018
5UKQ
DownloadVisualize
BU of 5ukq by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab
分子名称: DH522.2 Fab fragment heavy chain, DH522.2 Fab fragment light chain, GLYCEROL
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
4GUM
DownloadVisualize
BU of 4gum by Molmil
Cystal structure of locked-trimer of human MIF
分子名称: CHLORIDE ION, Macrophage migration inhibitory factor
著者Fan, C, Lolis, E.
登録日2012-08-29
公開日2013-07-03
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献MIF intersubunit disulfide mutant antagonist supports activation of CD74 by endogenous MIF trimer at physiologic concentrations.
Proc.Natl.Acad.Sci.USA, 110, 2013
1SGM
DownloadVisualize
BU of 1sgm by Molmil
Crystal Structure of Hypothetical Protein YXAF
分子名称: Putative HTH-type transcriptional regulator yxaF
著者Seetharaman, J, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2004-02-24
公開日2004-08-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a putative HTH-type transcriptional regulator yxaF from Bacillus subtilis.
Proteins, 63, 2006
1GBD
DownloadVisualize
BU of 1gbd by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY ALA COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID INHIBITOR, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1G9C
DownloadVisualize
BU of 1g9c by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM BOTULINUM NEUROTOXIN B COMPLEXED WITH AN INHIBITOR (EXPERIMENT 4)
分子名称: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, BOTULINUM NEUROTOXIN TYPE B, ZINC ION
著者Eswaramoorthy, S, Swaminathan, S.
登録日2000-11-22
公開日2002-11-13
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A Novel Mechanism for Clostridium botulinum Neurotoxin Inhibition
BIOCHEMISTRY, 41, 2002
2H5D
DownloadVisualize
BU of 2h5d by Molmil
0.9A resolution crystal structure of alpha-lytic protease complexed with a transition state analogue, MeOSuc-Ala-Ala-Pro-Val boronic acid
分子名称: ALPHA-LYTIC PROTEASE, GLYCEROL, MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID INHIBITOR, ...
著者Fuhrmann, C.N, Agard, D.A.
登録日2006-05-25
公開日2006-09-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Subangstrom crystallography reveals that short ionic hydrogen bonds, and not a His-Asp low-barrier hydrogen bond, stabilize the transition state in serine protease catalysis
J.Am.Chem.Soc., 128, 2006
1GBI
DownloadVisualize
BU of 1gbi by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY LEU COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-PHENYLALANINE BORONIC ACID INHIBITOR, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBL
DownloadVisualize
BU of 1gbl by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBJ
DownloadVisualize
BU of 1gbj by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBC
DownloadVisualize
BU of 1gbc by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY ALA COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBE
DownloadVisualize
BU of 1gbe by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY LEU
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1GBH
DownloadVisualize
BU of 1gbh by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY LEU COMPLEX WITH METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID
分子名称: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
6BXI
DownloadVisualize
BU of 6bxi by Molmil
X-ray crystal structure of NDR1 kinase domain
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase 38
著者Xiong, S, Sicheri, F.
登録日2017-12-18
公開日2018-08-29
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Auto-Inhibition of the NDR1 Kinase Domain by an Atypically Long Activation Segment.
Structure, 26, 2018
1G9A
DownloadVisualize
BU of 1g9a by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM BOTULINUM NEUROTOXIN B COMPLEXED WITH AN INHIBITOR (EXPERIMENT 3)
分子名称: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, BOTULINUM NEUROTOXIN TYPE B, ZINC ION
著者Eswaramoorthy, S, Swaminathan, S.
登録日2000-11-22
公開日2002-11-13
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Novel Mechanism for Clostridium botulinum Neurotoxin Inhibition
BIOCHEMISTRY, 41, 2002
1GBA
DownloadVisualize
BU of 1gba by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA AND GLY 216 REPLACED BY ALA
分子名称: ALPHA-LYTIC PROTEASE, SULFATE ION
著者Mace, J.E, Agard, D.A.
登録日1995-09-06
公開日1996-01-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon