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5USH
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BU of 5ush by Molmil
Structure of vaccinia virus D8 protein bound to human Fab vv66
分子名称: Fab vv66 heavy chain, Fab vv66 light chain, IMV membrane protein
著者Zajonc, D.M.
登録日2017-02-13
公開日2017-09-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure-function characterization of three human antibodies targeting the vaccinia virus adhesion molecule D8.
J. Biol. Chem., 293, 2018
5CEQ
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BU of 5ceq by Molmil
DLK in complex with inhibitor 2-((1-cyclopentyl-5-(1-(oxetan-3-yl)piperidin-4-yl)-1H-pyrazol-3-yl)amino)isonicotinonitrile
分子名称: 2-[[1-cyclopentyl-5-[1-(oxetan-3-yl)piperidin-4-yl]pyrazol-3-yl]amino]pyridine-4-carbonitrile, Mitogen-activated protein kinase kinase kinase 12
著者HARRIS, S.F, YIN, J.
登録日2015-07-07
公開日2015-10-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.911 Å)
主引用文献Scaffold-Hopping and Structure-Based Discovery of Potent, Selective, And Brain Penetrant N-(1H-Pyrazol-3-yl)pyridin-2-amine Inhibitors of Dual Leucine Zipper Kinase (DLK, MAP3K12).
J.Med.Chem., 58, 2015
6BMZ
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BU of 6bmz by Molmil
Influenza A M2 transmembrane domain bound to a spiroadamantane inhibitor
分子名称: (1r,1'S,3'S,5'S,7'S)-spiro[cyclohexane-1,2'-tricyclo[3.3.1.1~3,7~]decan]-4-amine, CHLORIDE ION, Matrix protein 2
著者Thomaston, J.L, DeGrado, W.F.
登録日2017-11-15
公開日2018-09-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.634 Å)
主引用文献Inhibitors of the M2 Proton Channel Engage and Disrupt Transmembrane Networks of Hydrogen-Bonded Waters.
J. Am. Chem. Soc., 140, 2018
5YVT
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BU of 5yvt by Molmil
Crystal structure of the alpha gamma heterodimer of human IDH3 in complex with Mg(2+) and NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, ...
著者Ma, T, Ding, J.
登録日2017-11-27
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Insights into the inhibitory mechanisms of NADH on the alpha gamma heterodimer of human NAD-dependent isocitrate dehydrogenase.
Sci Rep, 8, 2018
6BRS
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BU of 6brs by Molmil
The Crystal Structure of the Ferredoxin Protease FusC in complex with Arabidopsis Ferredoxin, Ethylmercury phosphate soaked dataset
分子名称: Ferredoxin-2, chloroplastic, MERCURY (II) ION, ...
著者Grinter, R.
登録日2017-11-30
公開日2018-06-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献FusC, a member of the M16 protease family acquired by bacteria for iron piracy against plants.
PLoS Biol., 16, 2018
2OUH
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BU of 2ouh by Molmil
Crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP10
分子名称: SULFATE ION, Thrombospondin-1
著者Tan, K, Joachimiak, A, Wang, J, Lawler, J.
登録日2007-02-11
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain.
J.Biol.Chem., 283, 2008
3L1L
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BU of 3l1l by Molmil
Structure of Arg-bound Escherichia coli AdiC
分子名称: ARGININE, Arginine/agmatine antiporter, nonyl beta-D-glucopyranoside
著者Gao, X, Zhou, L, Shi, Y.
登録日2009-12-13
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Mechanism of substrate recognition and transport by an amino acid antiporter
Nature, 463, 2010
5WTJ
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BU of 5wtj by Molmil
Crystal structure of an endonuclease
分子名称: CRISPR-associated endoribonuclease C2c2
著者Liu, L, Wang, Y.
登録日2016-12-13
公開日2017-02-08
最終更新日2017-08-30
実験手法X-RAY DIFFRACTION (3.503 Å)
主引用文献Two Distant Catalytic Sites Are Responsible for C2c2 RNase Activities
Cell, 168, 2017
5W0K
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BU of 5w0k by Molmil
Crystal structure of EBV gHgL/CL40/gp42 N-domain
分子名称: CL40 IgG heavy chain, CL40 IgG light chain, Envelope glycoprotein H, ...
著者Sathiyamoorthy, K, Jardetzky, T.S.
登録日2017-05-31
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Inhibition of EBV-mediated membrane fusion by anti-gHgL antibodies.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6CI4
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BU of 6ci4 by Molmil
Crystal structure of the formyltransferase PseJ from Anoxybacillus kamchatkensis soaked with UDP-4-amino-4,6-dideoxy-L-AltNAc
分子名称: (2R,3R,4S,5R,6S)-3-(acetylamino)-5-amino-4-hydroxy-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate, formyltransferase PseJ
著者Harb, I, Reimer, J.M, Schmeing, T.M.
登録日2018-02-23
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.824068 Å)
主引用文献Structural Insight into a Novel Formyltransferase and Evolution to a Nonribosomal Peptide Synthetase Tailoring Domain.
ACS Chem. Biol., 13, 2018
3FH7
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BU of 3fh7 by Molmil
Leukotriene A4 Hydrolase complexed with inhibitor 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}pyrrolidin-1-yl]butanoate.
分子名称: 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}pyrrolidin-1-yl]butanoate, ACETATE ION, GLYCEROL, ...
著者Mamat, B, Davies, D.R.
登録日2008-12-08
公開日2010-01-05
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Discovery of 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}-1-pyrrolidinyl]butanoic acid (DG-051) as a novel leukotriene A4 hydrolase inhibitor of leukotriene B4 biosynthesis.
J.Med.Chem., 53, 2010
5ZOV
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BU of 5zov by Molmil
Inward-facing conformation of L-ascorbate transporter UlaA
分子名称: ASCORBIC ACID, CALCIUM ION, PTS ascorbate-specific subunit IIBC
著者Wang, J.W.
登録日2018-04-16
公開日2018-08-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.333 Å)
主引用文献Inward-facing conformation of l-ascorbate transporter suggests an elevator mechanism
Cell Discov, 4, 2018
7LV8
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BU of 7lv8 by Molmil
Structure of the Marseillevirus nucleosome
分子名称: DNA (123-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
著者Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
登録日2021-02-24
公開日2021-05-05
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
7LV9
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BU of 7lv9 by Molmil
Marseillevirus heterotrimeric (hexameric) nucleosome
分子名称: DNA (96-MER), Histone doublet Beta-Alpha (Alpha), Histone doublet Beta-Alpha (Beta), ...
著者Valencia-Sanchez, M.I, Abini-Agbomson, S, Armache, K.-J.
登録日2021-02-24
公開日2021-05-05
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献The structure of a virus-encoded nucleosome.
Nat.Struct.Mol.Biol., 28, 2021
5X26
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BU of 5x26 by Molmil
Crystal structure of EGFR 696-1022 L858R in complex with SKLB(3)
分子名称: CHLORIDE ION, Epidermal growth factor receptor, N2-[4-(4-methylpiperazin-1-yl)phenyl]-N8-phenyl-9-propan-2-yl-purine-2,8-diamine
著者Yun, C.H.
登録日2017-01-31
公開日2018-02-07
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.951 Å)
主引用文献Structural insights into drug development strategy targeting EGFR T790M/C797S.
Oncotarget, 9, 2018
5X2K
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BU of 5x2k by Molmil
Crystal structure of EGFR 696-1022 T790M in complex with WZ4003
分子名称: Epidermal growth factor receptor, N-{3-[(5-chloro-2-{[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}prop-2-enamide
著者Zhu, S.J, Zhao, P, Yun, C.H.
登録日2017-02-01
公開日2018-02-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.201 Å)
主引用文献Structural insights into drug development strategy targeting EGFR T790M/C797S.
Oncotarget, 9, 2018
7VLX
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BU of 7vlx by Molmil
Cryo-EM structures of Listeria monocytogenes man-PTS
分子名称: Mannose/fructose/sorbose family PTS transporter subunit IIC, PTS mannose family transporter subunit IID, alpha-D-mannopyranose
著者Wang, J.W.
登録日2021-10-05
公開日2021-12-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Structural Basis of Pore Formation in the Mannose Phosphotransferase System by Pediocin PA-1.
Appl.Environ.Microbiol., 88, 2022
7VLY
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BU of 7vly by Molmil
Cryo-EM structure of Listeria monocytogenes man-PTS complexed with pediocin PA-1
分子名称: Bacteriocin pediocin PA-1, Mannose/fructose/sorbose family PTS transporter subunit IIC, PTS mannose family transporter subunit IID, ...
著者Wang, J.W.
登録日2021-10-05
公開日2021-12-01
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (2.45 Å)
主引用文献Structural Basis of Pore Formation in the Mannose Phosphotransferase System by Pediocin PA-1.
Appl.Environ.Microbiol., 88, 2022
2PNT
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BU of 2pnt by Molmil
Crystal structure of the PDZ domain of human GRASP (GRP1) in complex with the C-terminal peptide of the metabotropic glutamate receptor type 1
分子名称: CHLORIDE ION, General receptor for phosphoinositides 1-associated scaffold protein
著者Elkins, J, Papagrigoriou, E, Cooper, C, Gileadi, C, Uppenberg, J, Bray, J, von Delft, F, Pike, A.C.W, Ugochukwu, E, Umeano, C, Gileadi, O, Edwards, A, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2007-04-25
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms
Protein Sci., 19, 2010
7VI9
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BU of 7vi9 by Molmil
Cryo-EM structure of bacteriophage lambda procapsid at 5.03 Angstrom
分子名称: Major capsid protein
著者Wang, J.W.
登録日2021-09-26
公開日2021-12-15
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (5.03 Å)
主引用文献Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
7VII
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BU of 7vii by Molmil
cryoEM structure of bacteriophage lambda capsid at 5.6 Angstrom
分子名称: Capsid decoration protein, Major capsid protein
著者Wang, J.W.
登録日2021-09-27
公開日2021-12-15
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
5V2N
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BU of 5v2n by Molmil
Crystal Structure of APO Human SETD8
分子名称: 1,2-ETHANEDIOL, N-lysine methyltransferase KMT5A
著者Skene, R.J.
登録日2017-03-05
公開日2018-03-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The dynamic conformational landscape of the protein methyltransferase SETD8.
Elife, 8, 2019
7VIA
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BU of 7via by Molmil
Focused refinement of asymmetric unit of bacteriophage lambda procapsid at 3.88 Angstrom
分子名称: Major capsid protein
著者Wang, J.W.
登録日2021-09-26
公開日2021-12-15
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.88 Å)
主引用文献Structural basis of bacteriophage lambda capsid maturation.
Structure, 30, 2022
5UKQ
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BU of 5ukq by Molmil
Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab
分子名称: DH522.2 Fab fragment heavy chain, DH522.2 Fab fragment light chain, GLYCEROL
著者Nicely, N.I.
登録日2017-01-23
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Initiation of HIV neutralizing B cell lineages with sequential envelope immunizations.
Nat Commun, 8, 2017
2PA1
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BU of 2pa1 by Molmil
Structure of the PDZ domain of human PDLIM2 bound to a C-terminal extension from human beta-tropomyosin
分子名称: CHLORIDE ION, PDZ and LIM domain protein 2
著者Uppenberg, J, Shrestha, L, Elkins, J, Burgess-Brown, N, Salah, E, Bunkoczi, G, Papagrigoriou, E, Pike, A.C.W, Turnbull, A.P, Ugochukwu, E, Umeano, C, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2007-03-27
公開日2007-05-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Unusual binding interactions in PDZ domain crystal structures help explain binding mechanisms
Protein Sci., 19, 2010

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