Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8GP5
DownloadVisualize
BU of 8gp5 by Molmil
Structure of X18 UFO protomer in complex with F6 Fab VHVL domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, F6 Fab VH domain, ...
著者Niu, J, Xu, Y.W, Yang, B.
登録日2022-08-25
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Structures and immune recognition of Env trimers from two Asia prevalent HIV-1 CRFs.
Nat Commun, 14, 2023
8GPI
DownloadVisualize
BU of 8gpi by Molmil
HIV-1 Env X18 UFO in complex with 8ANC195 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 Fab heavy chain, ...
著者Niu, J, Xu, Y.W, Yang, B.
登録日2022-08-26
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures and immune recognition of Env trimers from two Asia prevalent HIV-1 CRFs.
Nat Commun, 14, 2023
8GPJ
DownloadVisualize
BU of 8gpj by Molmil
HIV-1 Env X16 UFO in complex with 8ANC195 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 8ANC195 Fab heavy chain, ...
著者Niu, J, Xu, Y.W, Yang, B.
登録日2022-08-26
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structures and immune recognition of Env trimers from two Asia prevalent HIV-1 CRFs.
Nat Commun, 14, 2023
8GPG
DownloadVisualize
BU of 8gpg by Molmil
HIV-1 Env X18 UFO in complex with F6 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, F6 Fab heavy chain, ...
著者Niu, J, Xu, Y.W, Yang, B.
登録日2022-08-26
公開日2023-08-09
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structures and immune recognition of Env trimers from two Asia prevalent HIV-1 CRFs.
Nat Commun, 14, 2023
8HN6
DownloadVisualize
BU of 8hn6 by Molmil
Crystal structure of monoclonal antibody complexed with SARS-CoV-2 RBD
分子名称: Heavy chain of monoclonal antibody 3G10, Light chain of monoclonal antibody 3G10, Spike protein S1
著者Qi, J, Chen, Y.
登録日2022-12-07
公開日2023-05-17
最終更新日2023-06-07
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Characterization of RBD-specific cross-neutralizing antibodies responses against SARS-CoV-2 variants from COVID-19 convalescents.
Front Immunol, 14, 2023
8HN7
DownloadVisualize
BU of 8hn7 by Molmil
Crystal structure of monoclonal antibody complexed with SARS-CoV-2 RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of monoclonal antibody 3C11, Light chain of monoclonal antibody 3C11, ...
著者Qi, J, Chen, Y.
登録日2022-12-07
公開日2023-05-17
最終更新日2023-06-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Characterization of RBD-specific cross-neutralizing antibodies responses against SARS-CoV-2 variants from COVID-19 convalescents.
Front Immunol, 14, 2023
3JTT
DownloadVisualize
BU of 3jtt by Molmil
Cystal structure of Rhesus macaque MHC class I:Mamu-A*02
分子名称: Beta-2-microglobulin, MHC class I Mamu-A*02, peptide of Protein Nef
著者Dai, L, Feng, Y, Qi, J, Gao, G.F.
登録日2009-09-14
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of Rhesus macaque MHC class I:Mamu-A*02
To be Published
3JTS
DownloadVisualize
BU of 3jts by Molmil
GY9-Mamu-A*02-hb2m
分子名称: Beta-2-microglobulin, MHC class I Mamu-A*02, peptide of Gag-Pol polyprotein
著者Dai, L, Feng, Y, Qi, J, Gao, G.F.
登録日2009-09-14
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Structure of Mamu A*2
To be Published
7CGW
DownloadVisualize
BU of 7cgw by Molmil
Complex structure of PD-1 and tislelizumab Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of tislelizumab Fab, Light chain of tislelizumab Fab, ...
著者Hong, Y, Feng, Y.C, Liu, Y.
登録日2020-07-02
公開日2021-04-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Tislelizumab uniquely binds to the CC' loop of PD-1 with slow-dissociated rate and complete PD-L1 blockage.
Febs Open Bio, 11, 2021
7E7E
DownloadVisualize
BU of 7e7e by Molmil
The co-crystal structure of ACE2 with Fab
分子名称: Processed angiotensin-converting enzyme 2, ZINC ION, h11B11-Fab
著者Xiao, J.Y, Zhang, Y.
登録日2021-02-26
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A broadly neutralizing humanized ACE2-targeting antibody against SARS-CoV-2 variants.
Nat Commun, 12, 2021
6L87
DownloadVisualize
BU of 6l87 by Molmil
Solution structure of the tandem PWWP-ARID domains of human RBBP1
分子名称: AT-rich interactive domain-containing protein 4A
著者Gong, W.B, Perrett, S, Feng, Y.G.
登録日2019-11-05
公開日2021-01-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insight into chromatin recognition by multiple domains of the tumor suppressor RBBP1.
J.Mol.Biol., 2021
3BG8
DownloadVisualize
BU of 3bg8 by Molmil
Crystal structure of Factor XIa in complex with Clavatadine A
分子名称: BENZAMIDINE, Coagulation factor XIa light chain, N-(4-carbamimidamidobutyl)ethanamide, ...
著者Xue, Y, Oster, L.
登録日2007-11-26
公開日2008-12-09
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Clavatadine A, a natural product with selective recognition and irreversible inhibition of factor XIa.
J.Med.Chem., 51, 2008
7Y0T
DownloadVisualize
BU of 7y0t by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A in complex with N-imidazolyl-hexanoyl-L-phenylalanyl-L-phenylalanine
分子名称: Bifunctional cytochrome P450/NADPH--P450 reductase, I7X-PHE-PHE, PROTOPORPHYRIN IX CONTAINING FE
著者Jiang, Y, Dong, S, Feng, Y, Cong, Z.
登録日2022-06-06
公開日2023-06-14
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Anchoring a Structurally Editable Proximal Cofactor-like Module to Construct an Artificial Dual-center Peroxygenase.
Angew.Chem.Int.Ed.Engl., 62, 2023
8HDJ
DownloadVisualize
BU of 8hdj by Molmil
Periplasmic domain of RsgI2 of Clostridium thermocellum
分子名称: Anti-sigma-I factor RsgI2, Periplasmic domain of RsgI2
著者Chen, C, Dong, S, Feng, Y.G.
登録日2022-11-04
公開日2023-05-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Essential autoproteolysis of bacterial anti-sigma factor RsgI for transmembrane signal transduction.
Sci Adv, 9, 2023
7WWF
DownloadVisualize
BU of 7wwf by Molmil
Crystal structure of BioH3 from Mycolicibacterium smegmatis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Esterase
著者Yang, J, Xu, Y.C, Gan, J.H, Feng, Y.J.
登録日2022-02-12
公開日2022-07-06
最終更新日2023-01-18
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献Three enigmatic BioH isoenzymes are programmed in the early stage of mycobacterial biotin synthesis, an attractive anti-TB drug target.
Plos Pathog., 18, 2022
7W26
DownloadVisualize
BU of 7w26 by Molmil
monolignol ferulate transferase
分子名称: Ferulate monolignol transferase
著者Xi, L, Shuliu, D, Yue, F, Yi, Z.
登録日2021-11-22
公開日2022-03-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Crystal structure of the plant feruloyl-coenzyme A monolignol transferase provides insights into the formation of monolignol ferulate conjugates.
Biochem.Biophys.Res.Commun., 594, 2022
6KUE
DownloadVisualize
BU of 6kue by Molmil
The structure of BioZ from Agrobacterium tumefaciens
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase III
著者Ouyang, S, Hongxin, G, Sitao, Z.
登録日2019-09-01
公開日2020-09-02
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.992 Å)
主引用文献Biochemical and structural characterization of the BioZ enzyme engaged in bacterial biotin synthesis pathway.
Nat Commun, 12, 2021
8R3Z
DownloadVisualize
BU of 8r3z by Molmil
Cryo-EM structure of the Asgard archaeal Argonaute HrAgo1 bound to a guide RNA
分子名称: HrAgo1, MAGNESIUM ION, RNA (5'-R(P*UP*GP*AP*GP*GP*U*(MG))-3')
著者Finocchio, G, Swarts, D, Jinek, M.
登録日2023-11-10
公開日2024-06-19
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献RNA-guided RNA silencing by an Asgard archaeal Argonaute.
Nat Commun, 15, 2024
6JBQ
DownloadVisualize
BU of 6jbq by Molmil
CryoEM structure of Escherichia coli sigmaE transcription initiation complex containing 5nt of RNA
分子名称: DNA (48-MER), DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
著者Fang, C.L, Zhang, Y.
登録日2019-01-26
公開日2019-05-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献Structures and mechanism of transcription initiation by bacterial ECF factors.
Nucleic Acids Res., 47, 2019
6JCX
DownloadVisualize
BU of 6jcx by Molmil
Mycobacterium tuberculosis transcription initiation complex with ECF sigma factor sigma H and 6nt RNA
分子名称: DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*T)-3'), DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3'), DNA-directed RNA polymerase subunit alpha, ...
著者Li, L, Zhang, Y.
登録日2019-01-30
公開日2019-05-29
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structures and mechanism of transcription initiation by bacterial ECF factors.
Nucleic Acids Res., 47, 2019
6J9E
DownloadVisualize
BU of 6j9e by Molmil
Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7
分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
著者You, L.L, Zhang, Y.
登録日2019-01-22
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.41 Å)
主引用文献Structural basis for transcription antitermination at bacterial intrinsic terminator.
Nat Commun, 10, 2019
6J9F
DownloadVisualize
BU of 6j9f by Molmil
Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with the bacteriophage protein P7
分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
著者You, L.L, Zhang, Y.
登録日2019-01-22
公開日2019-07-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.95 Å)
主引用文献Structural basis for transcription antitermination at bacterial intrinsic terminator.
Nat Commun, 10, 2019
8HTR
DownloadVisualize
BU of 8htr by Molmil
Crystal structure of Bcl2 in complex with S-9c
分子名称: 4-[4-[(2~{S})-2-(2-chlorophenyl)pyrrolidin-1-yl]phenyl]-~{N}-[3-nitro-4-(oxan-4-ylmethylamino)phenyl]sulfonyl-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide, Apoptosis regulator Bcl-2
著者Liu, J, Xu, M, Feng, Y, Liu, Y.
登録日2022-12-21
公開日2024-05-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of the Clinical Candidate Sonrotoclax (BGB-11417), a Highly Potent and Selective Inhibitor for Both WT and G101V Mutant Bcl-2.
J.Med.Chem., 67, 2024
8HTS
DownloadVisualize
BU of 8hts by Molmil
Crystal structure of Bcl2 in complex with S-10r
分子名称: 4-[2-[(2~{S})-2-(2-cyclopropylphenyl)pyrrolidin-1-yl]-7-azaspiro[3.5]nonan-7-yl]-~{N}-[3-nitro-4-(oxan-4-ylmethylamino)phenyl]sulfonyl-2-(1~{H}-pyrrolo[2,3-b]pyridin-5-yloxy)benzamide, Apoptosis regulator Bcl-2
著者Liu, J, Xu, M, Feng, Y, Liu, Y.
登録日2022-12-21
公開日2024-05-15
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Discovery of the Clinical Candidate Sonrotoclax (BGB-11417), a Highly Potent and Selective Inhibitor for Both WT and G101V Mutant Bcl-2.
J.Med.Chem., 67, 2024
8H02
DownloadVisualize
BU of 8h02 by Molmil
Crystal structure of Synechococcus elongatus PCC 7942 RNA polymerase SI3-tail
分子名称: DNA-directed RNA polymerase subunit beta'
著者Shen, L.Q, Zhang, Y.
登録日2022-09-27
公開日2023-04-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.552 Å)
主引用文献An SI3-sigma arch stabilizes cyanobacteria transcription initiation complex.
Proc.Natl.Acad.Sci.USA, 120, 2023

223166

件を2024-07-31に公開中

PDB statisticsPDBj update infoContact PDBjnumon