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3C4S
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BU of 3c4s by Molmil
Crystal structure of the Ssl0352 protein from Synechocystis sp. Northeast Structural Genomics Consortium target SgR42
分子名称: Ssl0352 protein
著者Vorobiev, S.M, Chen, Y, Seetharaman, J, Wang, D, Maglaqui, M, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-01-30
公開日2008-02-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of the Ssl0352 protein from Synechocystis sp.
To be Published
3BU4
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BU of 3bu4 by Molmil
RIBONUCLEASE T1 COMPLEX WITH 2'GMP
分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, PROTEIN (RIBONUCLEASE T1)
著者Loris, R, Devos, S, Langhorst, U, Decanniere, K, Bouckaert, J, Maes, D, Transue, T.R, Steyaert, J.
登録日1998-09-14
公開日1998-09-23
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Conserved water molecules in a large family of microbial ribonucleases.
Proteins, 36, 1999
3BZW
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BU of 3bzw by Molmil
Crystal structure of a putative lipase from Bacteroides thetaiotaomicron
分子名称: ACETATE ION, Putative lipase, SULFATE ION
著者Palani, K, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-01-18
公開日2008-02-05
最終更新日2021-02-03
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Crystal structure of a putative lipase from Bacteroides thetaiotaomicron.
To be Published
8VM9
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BU of 8vm9 by Molmil
The crystal structure of rhinovirus B14 RNA replication element sD-loop mutant in complex with Fab BL3-6
分子名称: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (85-MER)
著者Das, N.K, Koirala, D.
登録日2024-01-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
8VMA
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BU of 8vma by Molmil
The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
分子名称: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (88-MER)
著者Das, N.K, Koirala, D.
登録日2024-01-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.54 Å)
主引用文献Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
8W35
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BU of 8w35 by Molmil
Aca2 from Pectobacterium phage ZF40 bound to RNA
分子名称: Anti-CRISPR associated (Aca) protein, Aca2, IR2 and IR-RBS RNA
著者Wilkinson, M.E, Birkholz, N, Kimanius, D, Fineran, P.C.
登録日2024-02-21
公開日2024-07-24
最終更新日2024-08-14
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Phage anti-CRISPR control by an RNA- and DNA-binding helix-turn-helix protein.
Nature, 631, 2024
8VM8
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BU of 8vm8 by Molmil
The crystal structure of coxsackievirus B3 RNA replication element sD-loop mutant in complex with Fab BL3-6
分子名称: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (93-MER)
著者Das, N.K, Koirala, D.
登録日2024-01-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
7ROA
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BU of 7roa by Molmil
Crystal structure of EntV136 from Enterococcus faecalis
分子名称: EntV
著者Stogios, P.J, Evdokimova, E, Kim, Y, Garsin, D, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
登録日2021-07-30
公開日2022-10-12
最終更新日2023-01-25
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural and functional analysis of EntV reveals a 12 amino acid fragment protective against fungal infections.
Nat Commun, 13, 2022
2ZB6
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BU of 2zb6 by Molmil
Crystal structure of the measles virus hemagglutinin (oligo-sugar type)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin protein
著者Hashiguchi, T, Kajikawa, M, Maita, N, Takeda, M, Kuroki, K, Sasaki, K, Kohda, D, Yanagi, Y, Maenaka, K.
登録日2007-10-16
公開日2007-11-06
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of measles virus hemagglutinin provides insight into effective vaccines
Proc.Natl.Acad.Sci.Usa, 104, 2007
8WQO
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BU of 8wqo by Molmil
Crystal structure of BRD4-BD1 bound with DI106
分子名称: (3~{R})-6-[[4-(3,5-dimethyl-1~{H}-pyrazol-4-yl)pyrimidin-2-yl]amino]-1,3-dimethyl-4-propan-2-yl-3~{H}-quinoxalin-2-one, Isoform C of Bromodomain-containing protein 4
著者Cao, D, Xiong, B.
登録日2023-10-12
公開日2024-07-24
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Rational design and evaluation of BET-Aurora A dual-inhibitors for treatment of cancers
To Be Published
8VMB
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BU of 8vmb by Molmil
The crystal structure of rhinovirus C15 RNA replication element sB-loop mutant in complex with Fab BL3-6
分子名称: Heavy Chain of Fab BL3-6, Light Chain of Fab BL3-6, RNA (83-MER)
著者Das, N.K, Koirala, D.
登録日2024-01-13
公開日2024-07-24
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (2.97 Å)
主引用文献Structural basis for a highly conserved RNA-mediated enteroviral genome replication.
Nucleic Acids Res., 2024
2ZGZ
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BU of 2zgz by Molmil
PARM with GMPPNP
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Plasmid segregation protein parM
著者Popp, D, Narita, A, Oda, T, Fujisawa, T, Matsuo, H, Nitanai, Y, Iwasa, M, Maeda, K, Onishi, H, Maeda, Y.
登録日2008-01-30
公開日2008-02-12
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Molecular structure of the ParM polymer and the mechanism leading to its nucleotide-driven dynamic instability
Embo J., 27, 2008
7Z2K
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BU of 7z2k by Molmil
Crystal structure of SARS-CoV-2 Main Protease in orthorhombic space group p212121
分子名称: 3C-like proteinase nsp5, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A.
登録日2022-02-28
公開日2023-03-22
最終更新日2024-07-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献SARS-CoV-2 M pro responds to oxidation by forming disulfide and NOS/SONOS bonds.
Nat Commun, 15, 2024
2ZM7
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BU of 2zm7 by Molmil
Structure of 6-Aminohexanoate-dimer Hydrolase, S112A/G181D Mutant Complexed with 6-Aminohexanoate-dimer
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-AMINOHEXANOIC ACID, 6-aminohexanoate-dimer hydrolase, ...
著者Ohki, T, Shibata, N, Higuchi, Y, Kawashima, Y, Takeo, M, Kato, D, Negoro, S.
登録日2008-04-14
公開日2009-04-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold
Febs J., 276, 2009
8W9Y
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BU of 8w9y by Molmil
The cryo-EM structure of human sphingomyelin synthase-related protein
分子名称: Sphingomyelin synthase-related protein 1
著者Hu, K, Zhang, Q, Chen, Y, Yao, D, Zhou, L, Cao, Y.
登録日2023-09-06
公開日2024-02-28
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of human sphingomyelin synthase and its mechanistic implications for sphingomyelin synthesis.
Nat.Struct.Mol.Biol., 31, 2024
2ERH
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BU of 2erh by Molmil
Crystal Structure of the E7_G/Im7_G complex; a designed interface between the colicin E7 DNAse and the Im7 immunity protein
分子名称: Colicin E7, Colicin E7 immunity protein
著者Joachimiak, L.A, Kortemme, T, Stoddard, B.L, Baker, D.
登録日2005-10-24
公開日2006-07-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Computational Design of a New Hydrogen Bond Network and at Least a 300-fold Specificity Switch at a Protein-Protein Interface.
J.Mol.Biol., 361, 2006
8VLB
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BU of 8vlb by Molmil
Crystal structure of EloBC-VHL-CDO1 complex bound to compound 4 molecular glue
分子名称: CITRIC ACID, Cysteine dioxygenase type 1, Elongin-B, ...
著者Shu, W, Ma, X, Tutter, A, Buckley, D, Golosov, A, Michaud, G.
登録日2024-01-11
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A small molecule VHL molecular glue degrader for cysteine dioxygenase 1
To Be Published
6CFF
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BU of 6cff by Molmil
Stimulator of Interferon Genes Human
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Stimulator of interferon genes protein
著者Fernandez, D, Li, L, Ergun, S.L.
登録日2018-02-14
公開日2019-03-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.396 Å)
主引用文献STING Polymer Structure Reveals Mechanisms for Activation, Hyperactivation, and Inhibition.
Cell, 178, 2019
7ZDR
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BU of 7zdr by Molmil
IF(apo/as isolated) conformation of CydDC mutant (H85A.C) in AMP-PNP(CydD) bound state (Dataset-16)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDB
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BU of 7zdb by Molmil
IF(heme/bound) conformation of CydDC in ADP+Pi(CydC)/ATP(CydD) bound state (Dataset-2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
8VL9
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BU of 8vl9 by Molmil
Crystal structure of EloBC-VHL-CDO1 complex bound to compound 8 molecular glue
分子名称: CITRIC ACID, Cysteine dioxygenase type 1, Elongin-B, ...
著者Shu, W, Ma, X, Tutter, A, Buckley, D, Golosov, A, Michaud, G.
登録日2024-01-11
公開日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A small molecule VHL molecular glue degrader for cysteine dioxygenase 1
To Be Published
7ZDG
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BU of 7zdg by Molmil
IF(heme/confined) conformation of CydDC (Dataset-5)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, HEME B/C
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDS
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BU of 7zds by Molmil
IF(apo/as isolated) conformation of CydDC mutant (E500Q.C) (Dataset-18)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDV
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BU of 7zdv by Molmil
IF(apo/as isolated) conformation of CydDC mutant (E500Q.C) in AMP-PNP(CydD) bound state (Dataset-20)
分子名称: ATP-binding/permease protein CydC, ATP-binding/permease protein CydD, MAGNESIUM ION, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023
7ZDA
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BU of 7zda by Molmil
IF(apo/asym) conformation of CydDC in ADP+Pi(CydC)/ATP(CydD) bound state (Dataset-2)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP-binding/permease protein CydC, ...
著者Wu, D, Safarian, S.
登録日2022-03-29
公開日2023-04-19
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.17 Å)
主引用文献Dissecting the conformational complexity and mechanism of a bacterial heme transporter.
Nat.Chem.Biol., 19, 2023

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件を2024-08-14に公開中

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