Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7RUI
DownloadVisualize
BU of 7rui by Molmil
Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
分子名称: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(5-{[(2-fluorophenyl)carbamoyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-1H-indol-4-yl}-2,2,2-trifluoroethane-1-sulfonamide
著者Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
登録日2021-08-17
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
To Be Published
2M3E
DownloadVisualize
BU of 2m3e by Molmil
The Integrin Alpha L Transmembrane Domain in Bicelles: Structure and Interaction with Integrin Beta 2
分子名称: Integrin alpha-L
著者Surya, W, Li, Y, Millet, O, Diercks, T, Torres, J.
登録日2013-01-17
公開日2014-01-29
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The Integrin Alpha L Transmembrane Domain in Bicelles: Structure and Interaction with Integrin Beta 2
To be Published
2M6U
DownloadVisualize
BU of 2m6u by Molmil
NMR Structure of CbpAN from Streptococcus pneumoniae
分子名称: Choline binding protein A
著者Liu, A, Yan, H, Achila, D, Martinez-Hackert, E, Li, Y, Banerjee, R.
登録日2013-04-10
公開日2014-04-16
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural determinants of host specificity of complement Factor H recruitment by Streptococcus pneumoniae.
Biochem.J., 465, 2015
7T39
DownloadVisualize
BU of 7t39 by Molmil
Co-crystal structure of human PRMT9 in complex with MT221 inhibitor
分子名称: 7-[5-S-(4-{[(2-ethylpyridin-3-yl)methyl]amino}butyl)-5-thio-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Protein arginine N-methyltransferase 9
著者Zeng, H, Dong, A, Hutchinson, A, Seitova, A, Li, Y, Gao, Y.D, Schneider, S, Siliphaivanh, P, Sloman, D, Nicholson, B, Fischer, C, Hicks, J, Brown, P.J, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
登録日2021-12-07
公開日2021-12-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Co-crystal structure of human PRMT9 in complex with MT221 inhibitor
To Be Published
1S1J
DownloadVisualize
BU of 1s1j by Molmil
Crystal Structure of ZipA in complex with indoloquinolizin inhibitor 1
分子名称: (12bS)-1,2,3,4,12,12b-hexahydroindolo[2,3-a]quinolizin-7(6H)-one, Cell division protein zipA
著者Jenning, L.D, Foreman, K.W, Rush III, T.S, Tsao, D.H, Mosyak, L, Li, Y, Sukhdeo, M.N, Ding, W, Dushin, E.G, Kenney, C.H, Moghazeh, S.L, Peterson, P.J, Ruzin, A.V, Tuckman, M, Sutherland, A.G.
登録日2004-01-06
公開日2004-05-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Design and synthesis of indolo[2,3-a]quinolizin-7-one inhibitors of the ZipA-FtsZ interaction
Bioorg.Med.Chem.Lett., 14, 2004
6VAH
DownloadVisualize
BU of 6vah by Molmil
Crystal structure of human TEAD2 transcription factor in complex with Flufenamic acid derivative
分子名称: 2-fluoro-6-[(3-hexylphenyl)amino]benzoic acid, Transcriptional enhancer factor TEF-4, UNKNOWN ATOM OR ION
著者Halabelian, L, Zeng, H, Dong, A, Li, Y, Melin, L, Gagnon, A, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Santhakumar, V, Structural Genomics Consortium (SGC)
登録日2019-12-17
公開日2020-04-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Crystal structure of human TEAD2 transcription factor in complex with Flufenamic acid derivative
to be published
8A9W
DownloadVisualize
BU of 8a9w by Molmil
Crystal structure of PulL C-ter domain
分子名称: SULFATE ION, Type II secretion system protein L
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-06-29
公開日2023-01-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.895 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
2MQ6
DownloadVisualize
BU of 2mq6 by Molmil
Solution structure of Y125F mutant of eRF1 N-domain
分子名称: Eukaryotic peptide chain release factor subunit 1
著者Pillay, S, Li, Y, Wong, L, Pervushin, K.
登録日2014-06-12
公開日2015-06-17
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural insights of eRF1 mutants and their correlation with stop codon recognition
To be Published
8A9X
DownloadVisualize
BU of 8a9x by Molmil
Crystal structure of PulM C-ter domain
分子名称: Type II secretion system protein M
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-06-29
公開日2023-01-25
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.523 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
6C9G
DownloadVisualize
BU of 6c9g by Molmil
AMP-activated protein kinase bound to pharmacological activator R739
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1,5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
著者Yan, Y, Zhou, X.E, Novick, S, Shaw, S.J, Li, Y, Hitoshi, Y, Brunzelle, J.S, Griffin, P.R, Xu, H.E, Melcher, K.
登録日2018-01-26
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states.
J. Biol. Chem., 294, 2019
6C9F
DownloadVisualize
BU of 6c9f by Molmil
AMP-activated protein kinase bound to pharmacological activator R734
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1,5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
著者Yan, Y, Zhou, X.E, Novick, S, Shaw, S.J, Li, Y, Hitoshi, Y, Brunzelle, J.S, Griffin, P.R, Xu, H.E, Melcher, K.
登録日2018-01-26
公開日2018-11-28
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.924 Å)
主引用文献Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states.
J. Biol. Chem., 294, 2019
8AS8
DownloadVisualize
BU of 8as8 by Molmil
E. coli Wadjet JetABC monomer
分子名称: ADENOSINE-5'-DIPHOSPHATE, JetA, JetB, ...
著者Roisne-Hamelin, F, Beckert, B, Li, Y, Myasnikov, A, Gruber, S.
登録日2022-08-18
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage.
Mol.Cell, 82, 2022
1S1S
DownloadVisualize
BU of 1s1s by Molmil
Crystal Structure of ZipA in complex with indoloquinolizin 10b
分子名称: Cell division protein zipA, N-{3-[(12bS)-7-oxo-1,3,4,6,7,12b-hexahydroindolo[2,3-a]quinolizin-12(2H)-yl]propyl}propane-2-sulfonamide
著者Jennings, L.D, Foreman, K.W, Rush III, T.S, Tsao, D.H, Mosyak, L, Li, Y, Sukhdeo, M.N, Ding, W, Dushin, E.G, Kenny, C.H, Moghazeh, S.L, Petersen, P.J, Ruzin, A.V, Tuckman, M, Sutherland, A.G.
登録日2004-01-07
公開日2005-01-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design and synthesis of indolo[2,3-a]quinolizin-7-one inhibitors of the ZipA-FtsZ interaction
BIOORG.MED.CHEM.LETT., 14, 2004
6C9J
DownloadVisualize
BU of 6c9j by Molmil
AMP-activated protein kinase bound to pharmacological activator R734
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
著者Yan, Y, Zhou, X.E, Novick, S, Shaw, S.J, Li, Y, Brunzelle, J.S, Hitoshi, Y, Griffin, P.R, Xu, H.E, Melcher, K.
登録日2018-01-26
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states.
J. Biol. Chem., 294, 2019
8AB1
DownloadVisualize
BU of 8ab1 by Molmil
Crystal structure of the PulL-PulM C-terminal domain heterocomplex
分子名称: Type II secretion system protein L, Type II secretion system protein M
著者Dazzoni, R, Li, Y, Lopez-Castilla, A, Brier, S, Mechaly, A, Cordier, F, Haouz, A, Nilges, M, Francetic, O, Bardiaux, B, Izadi-Pruneyre, N.
登録日2022-07-04
公開日2023-01-11
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structure and dynamic association of an assembly platform subcomplex of the bacterial type II secretion system.
Structure, 31, 2023
7R5F
DownloadVisualize
BU of 7r5f by Molmil
Crystal structure of YTHDF2 with compound YLI_DF_012
分子名称: 5-azanyl-6-methyl-1~{H}-pyrimidine-2,4-dione, CHLORIDE ION, SULFATE ION, ...
著者Nai, F, Li, Y, Caflisch, A.
登録日2022-02-10
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Fragment Ligands of the m 6 A-RNA Reader YTHDF2.
Acs Med.Chem.Lett., 13, 2022
7R5L
DownloadVisualize
BU of 7r5l by Molmil
Crystal structure of YTHDF2 with compound YLI_DC1_015
分子名称: 3,6-dimethyl-2~{H}-1,2,4-triazin-5-one, SULFATE ION, YTH domain-containing family protein 2
著者Nachawati, R, Nai, F, Li, Y, Caflisch, A.
登録日2022-02-10
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fragment Ligands of the m 6 A-RNA Reader YTHDF2.
Acs Med.Chem.Lett., 13, 2022
6C9H
DownloadVisualize
BU of 6c9h by Molmil
non-phosphorylated AMP-activated protein kinase bound to pharmacological activator R734
分子名称: 5'-AMP-activated protein kinase catalytic subunit alpha-1, 5'-AMP-activated protein kinase subunit beta-1, 5'-AMP-activated protein kinase subunit gamma-1, ...
著者Yan, Y, Zhou, X.E, Novick, S, Shaw, S.J, Li, Y, Hitoshi, Y, Brunzelle, J.S, Griffin, P.R, Xu, H.E, Melcher, K.
登録日2018-01-26
公開日2018-11-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structures of AMP-activated protein kinase bound to novel pharmacological activators in phosphorylated, non-phosphorylated, and nucleotide-free states.
J. Biol. Chem., 294, 2019
6WAJ
DownloadVisualize
BU of 6waj by Molmil
Crystal structure of the UBL domain of human NLE1
分子名称: NLE1, UNKNOWN ATOM OR ION
著者Halabelian, L, Zeng, H, Li, Y, Bountra, C, Edwards, A.M, Arrowsmith, C.H, Structural Genomics Consortium (SGC)
登録日2020-03-25
公開日2020-04-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the UBL domain of human NLE1
To be Published
1RW9
DownloadVisualize
BU of 1rw9 by Molmil
Crystal structure of the Arthrobacter aurescens chondroitin AC lyase
分子名称: PHOSPHATE ION, SODIUM ION, chondroitin AC lyase
著者Lunin, V.V, Li, Y, Linhardt, R.J, Miyazono, H, Kyogashima, M, Kaneko, T, Bell, A.W, Cygler, M.
登録日2003-12-16
公開日2004-04-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004
1RWH
DownloadVisualize
BU of 1rwh by Molmil
Crystal structure of Arthrobacter aurescens chondroitin AC lyase in complex with chondroitin tetrasaccharide
分子名称: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-2,6-anhydro-3-deoxy-L-xylo-hexonic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, GLYCEROL, PHOSPHATE ION, ...
著者Lunin, V.V, Li, Y, Miyazono, H, Kyogashima, M, Bell, A.W, Cygler, M.
登録日2003-12-16
公開日2004-04-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004
7R5W
DownloadVisualize
BU of 7r5w by Molmil
Crystal structure of YTHDF2 with compound YLI_DF_029
分子名称: 6-cyclopropyl-1H-pyrimidine-2,4-dione, CHLORIDE ION, GLYCEROL, ...
著者Nai, F, Li, Y, Caflisch, A.
登録日2022-02-11
公開日2022-03-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Fragment Ligands of the m 6 A-RNA Reader YTHDF2.
Acs Med.Chem.Lett., 13, 2022
1RWC
DownloadVisualize
BU of 1rwc by Molmil
Crystal structure of Arthrobacter aurescens chondroitin AC lyase
分子名称: 2,6-anhydro-3-deoxy-L-threo-hex-2-enonic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, PHOSPHATE ION, ...
著者Lunin, V.V, Li, Y, Miyazono, H, Kyogashima, M, Bell, A.W, Cygler, M.
登録日2003-12-16
公開日2004-04-13
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004
1RWA
DownloadVisualize
BU of 1rwa by Molmil
Crystal structure of Arthrobacter aurescens chondroitin AC lyase
分子名称: GLYCEROL, MERCURY (II) ION, chondroitin AC lyase
著者Lunin, V.V, Li, Y, Miyazono, H, Kyogashima, M, Bell, A.W, Cygler, M.
登録日2003-12-16
公開日2004-04-13
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献High-resolution crystal structure of Arthrobacter aurescens chondroitin AC lyase: an enzyme-substrate complex defines the catalytic mechanism
J.Mol.Biol., 337, 2004
8BFN
DownloadVisualize
BU of 8bfn by Molmil
E. coli Wadjet JetABC dimer of dimers
分子名称: ADENOSINE-5'-DIPHOSPHATE, JetA, JetB, ...
著者Roisne-Hamelin, F, Beckert, B, Myasnikov, A, Li, Y, Gruber, S.
登録日2022-10-26
公開日2022-12-14
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献DNA-measuring Wadjet SMC ATPases restrict smaller circular plasmids by DNA cleavage.
Mol.Cell, 82, 2022

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon