Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8TI7
DownloadVisualize
BU of 8ti7 by Molmil
Crystal structure of profilin from Dermatophagoides pteronyssinus in complex with a poly(L-proline) peptide
分子名称: Profilin, SULFATE ION, poly(L-proline)
著者O'Malley, A, Sankaran, S, Chruszcz, M.
登録日2023-07-19
公開日2024-05-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Structural homology of mite profilins to plant profilins is not indicative of allergic cross-reactivity.
Biol.Chem., 405, 2024
3VXP
DownloadVisualize
BU of 3vxp by Molmil
HLA-A24 in complex with HIV-1 Nef134-10(6L)
分子名称: 10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
登録日2012-09-20
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
SCI REP, 3, 2013
7Z63
DownloadVisualize
BU of 7z63 by Molmil
Structure of the LecA lectin from Pseudomonas aeruginosa in complex with a biaryl-thiogalactoside
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, PA-I galactophilic lectin, ...
著者Varrot, A.
登録日2022-03-10
公開日2023-01-18
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Discovery of potent 1,1-diarylthiogalactoside glycomimetic inhibitors of Pseudomonas aeruginosa LecA with antibiofilm properties.
Eur.J.Med.Chem., 247, 2022
8TI5
DownloadVisualize
BU of 8ti5 by Molmil
Crystal structure of Tyr p 36.0101
分子名称: Profilin, SULFATE ION
著者O'Malley, A, Sankaran, S, Chruszcz, M.
登録日2023-07-19
公開日2024-05-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural homology of mite profilins to plant profilins is not indicative of allergic cross-reactivity.
Biol.Chem., 405, 2024
3VXR
DownloadVisualize
BU of 3vxr by Molmil
The complex between H27-14 TCR and HLA-A24 bound to HIV-1 Nef134-10(wt) peptide
分子名称: 10-mer peptide from Protein Nef, Beta-2-microglobulin, H27-14 TCR alpha chain, ...
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
登録日2012-09-20
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
SCI REP, 3, 2013
7JMH
DownloadVisualize
BU of 7jmh by Molmil
Functional Pathways of Biomolecules Retrieved from Single-particle Snapshots - Frame 35 - State 4 (S4)
分子名称: CALCIUM ION, Peptidyl-prolyl cis-trans isomerase FKBP1B, ZINC ION, ...
著者Dashti, A, des Georges, A, Frank, J, Ourmazd, A.
登録日2020-07-31
公開日2020-08-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Retrieving functional pathways of biomolecules from single-particle snapshots.
Nat Commun, 11, 2020
7W27
DownloadVisualize
BU of 7w27 by Molmil
Crystal structure of BEND3-BEN4-DNA complex
分子名称: BEN domain-containing protein 3, DNA (5'-D(P*GP*GP*AP*CP*CP*CP*AP*CP*GP*CP*AP*GP*C)-3'), DNA (5'-D(P*GP*GP*CP*TP*GP*CP*GP*TP*GP*GP*GP*TP*C)-3')
著者Zheng, L, Ren, A.
登録日2021-11-22
公開日2022-02-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Distinct structural bases for sequence-specific DNA binding by mammalian BEN domain proteins.
Genes Dev., 36, 2022
7SJN
DownloadVisualize
BU of 7sjn by Molmil
HtrA1:Fab15H6.v4 complex
分子名称: Fab15H6.v4 Heavy Chain, Fab15H6.v4 Light Chain, Serine protease HTRA1
著者Gerhardy, S, Green, E, Estevez, A, Arthur, C.P, Ultsch, M, Rohou, A, Kirchhofer, D.
登録日2021-10-18
公開日2022-09-07
最終更新日2022-09-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Allosteric inhibition of HTRA1 activity by a conformational lock mechanism to treat age-related macular degeneration.
Nat Commun, 13, 2022
7OYB
DownloadVisualize
BU of 7oyb by Molmil
Cryo-EM structure of the 6 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYA
DownloadVisualize
BU of 7oya by Molmil
Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-13
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
3RJW
DownloadVisualize
BU of 3rjw by Molmil
Crystal structure of histone lysine methyltransferase g9a with an inhibitor
分子名称: 2-cyclohexyl-6-methoxy-N-[1-(1-methylethyl)piperidin-4-yl]-7-(3-pyrrolidin-1-ylpropoxy)quinazolin-4-amine, Histone-lysine N-methyltransferase EHMT2, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Dong, A, Wasney, G.A, Tempel, W, Liu, F, Barsyte, D, Allali-Hassani, A, Chen, X, Chau, I, Hajian, T, Senisterra, G, Chavda, N, Arora, K, Siarheyeva, A, Kireev, D.B, Herold, J.M, Bochkarev, A, Bountra, C, Weigelt, J, Edwards, A.M, Frye, S.V, Arrowsmith, C.H, Brown, P.J, Jin, J, Vedadi, M, Structural Genomics Consortium (SGC)
登録日2011-04-15
公開日2011-05-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献A chemical probe selectively inhibits G9a and GLP methyltransferase activity in cells.
Nat.Chem.Biol., 7, 2011
7SCN
DownloadVisualize
BU of 7scn by Molmil
Structure of H1 NC99 influenza hemagglutinin bound to Fab 310-63E6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 310-63E6 Fab, Heavy Chain, ...
著者Ward, A, Torrents de la Pena, A.
登録日2021-09-28
公開日2022-08-24
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.02 Å)
主引用文献Allelic polymorphism controls autoreactivity and vaccine elicitation of human broadly neutralizing antibodies against influenza virus.
Immunity, 55, 2022
7OYD
DownloadVisualize
BU of 7oyd by Molmil
Cryo-EM structure of a rabbit 80S ribosome with zebrafish Dap1b
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S11, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7OYC
DownloadVisualize
BU of 7oyc by Molmil
Cryo-EM structure of the Xenopus egg 80S ribosome
分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
著者Leesch, F, Lorenzo-Orts, L, Grishkovskaya, I, Kandolf, S, Belacic, K, Meinhart, A, Haselbach, D, Pauli, A.
登録日2021-06-24
公開日2022-07-20
最終更新日2023-02-08
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献A molecular network of conserved factors keeps ribosomes dormant in the egg.
Nature, 613, 2023
7SJO
DownloadVisualize
BU of 7sjo by Molmil
HtrA1S328A:Fab15H6.v4 complex
分子名称: Fab15H6.v4 Heavy Chain, Fab15H6.v4 Light Chain, Serine protease HTRA1
著者Gerhardy, S, Green, E, Estevez, A, Arthur, C.P, Ultsch, M, Rohou, A, Kirchhofer, D.
登録日2021-10-18
公開日2022-09-07
最終更新日2022-09-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Allosteric inhibition of HTRA1 activity by a conformational lock mechanism to treat age-related macular degeneration.
Nat Commun, 13, 2022
7ACZ
DownloadVisualize
BU of 7acz by Molmil
RdeltaD2 H/L (LMW SLP/HMW SLP) complex from C. difficile SlpA (R20291 strain)
分子名称: SLPH (HMW SLP), SLPL deltaD2 (LMW SLP D2 truncation),SLPL deltaD2 (LMW SLP D2 truncation)
著者Lanzoni-Mangutchi, P, Barwinska-Sendra, A, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
7ACY
DownloadVisualize
BU of 7acy by Molmil
H/L (SLPH/SLPL) complex from C. difficile (CD630 strain)
分子名称: S-layer protein, SULFATE ION
著者Lanzoni-Mangutchi, P, Barwinska-Sendra, A, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
3VXT
DownloadVisualize
BU of 3vxt by Molmil
T36-5 TCR specific for HLA-A24-Nef134-10
分子名称: T36-5 TCR alpha chain, T36-5 TCR beta chain
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
登録日2012-09-20
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
SCI REP, 3, 2013
7P2E
DownloadVisualize
BU of 7p2e by Molmil
Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
分子名称: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
著者Itoh, Y, Khawaja, A, Singh, V, Rorbach, J, Amunts, A.
登録日2021-07-05
公開日2022-07-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of the mitoribosomal small subunit with streptomycin reveals Fe-S clusters and physiological molecules.
Elife, 11, 2022
7ACV
DownloadVisualize
BU of 7acv by Molmil
SLPL/HID (LMW SLP complex with HMW SLP interacting domain - HID) from C. difficile (R7404 strain)
分子名称: HID - interacting domain of SLP HMW, LMW SLP
著者Barwinska-Sendra, A, Lanzoni-Mangutchi, P, Salgado, P.S.
登録日2020-09-11
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and assembly of the S-layer in C. difficile.
Nat Commun, 13, 2022
7YTB
DownloadVisualize
BU of 7ytb by Molmil
Crystal structure of Kin4B8
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Kin4B8, RETINAL
著者Murakoshi, S, Chazan, A, Shihoya, W, Beja, O, Nureki, O.
登録日2022-08-14
公開日2023-03-15
最終更新日2023-03-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Phototrophy by antenna-containing rhodopsin pumps in aquatic environments.
Nature, 615, 2023
7P85
DownloadVisualize
BU of 7p85 by Molmil
Engineered phosphotriesterase BdPTE 10-2-C3(C59V/C227V) in complex with ethyl-4-methylbenzylphosphonate
分子名称: FORMIC ACID, GLYCEROL, Parathion hydrolase, ...
著者Eichinger, A, Skerra, A.
登録日2021-07-21
公開日2022-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural and Functional Analysis of a Highly Active Designed Phosphotriesterase for the Detoxification of Organophosphate Nerve Agents Reveals an Unpredicted Conformation of the Active Site Loop.
Biochemistry, 62, 2023
3VXN
DownloadVisualize
BU of 3vxn by Molmil
HLA-A24 in complex with HIV-1 Nef134-10(wt)
分子名称: 10-mer peptide from Protein Nef, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Shimizu, A, Fukai, S, Yamagata, A, Iwamoto, A.
登録日2012-09-20
公開日2013-10-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of TCR and antigen complexes at an immunodominant CTL epitope in HIV-1 infection
SCI REP, 3, 2013
7DAA
DownloadVisualize
BU of 7daa by Molmil
Crystal structure of basigin complexed with anti-basigin Fab fragment
分子名称: CADMIUM ION, Heavy chain of antibody Fab fragment, Isoform 2 of Basigin, ...
著者Sakuragi, T, Kanai, R, Narita, H, Onishi, E, Miyazaki, T, Baba, T, Nakagawa, A, Toyoshima, C, Nagata, S.
登録日2020-10-16
公開日2021-10-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献The tertiary structure of the human Xkr8-Basigin complex that scrambles phospholipids at plasma membranes.
Nat.Struct.Mol.Biol., 28, 2021
7AZB
DownloadVisualize
BU of 7azb by Molmil
Structure of DDR2 DS domain in complex with VHH
分子名称: Discoidin domain-containing receptor 2, VHH
著者Talagas, A, Nawrotek, A, Arrial, A, Vuillard, L.M, Miallau, L.
登録日2020-11-16
公開日2020-11-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Structure of DDR2 DS domain in complex with VHH
To Be Published

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon