Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7NEZ
DownloadVisualize
BU of 7nez by Molmil
Structure of topotecan-bound ABCG2
分子名称: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, ...
著者Kowal, J, Locher, K, Ni, D, Stahlberg, H.
登録日2021-02-05
公開日2021-04-21
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.39 Å)
主引用文献Structural Basis of Drug Recognition by the Multidrug Transporter ABCG2.
J.Mol.Biol., 433, 2021
7NFD
DownloadVisualize
BU of 7nfd by Molmil
Structure of mitoxantrone-bound ABCG2
分子名称: 1,4-DIHYDROXY-5,8-BIS({2-[(2-HYDROXYETHYL)AMINO]ETHYL}AMINO)-9,10-ANTHRACENEDIONE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, ...
著者Kowal, J, Locher, K, Ni, D, Stahlberg, H.
登録日2021-02-06
公開日2021-04-21
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structural Basis of Drug Recognition by the Multidrug Transporter ABCG2.
J.Mol.Biol., 433, 2021
8P7W
DownloadVisualize
BU of 8p7w by Molmil
Structure of 5D3-Fab and nanobody(Nb8)-bound ABCG2
分子名称: 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ATP-binding cassette sub-family G member 2, ...
著者Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
登録日2023-05-31
公開日2023-08-30
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023
8P8A
DownloadVisualize
BU of 8p8a by Molmil
Structure of 5D3-Fab and nanobody(Nb17)-bound ABCG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ...
著者Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
登録日2023-05-31
公開日2023-08-30
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023
8P8J
DownloadVisualize
BU of 8p8j by Molmil
Structure of 5D3-Fab and nanobody(Nb96)-bound ABCG2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ...
著者Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
登録日2023-06-01
公開日2023-08-30
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023
8PM6
DownloadVisualize
BU of 8pm6 by Molmil
Human bile salt export pump (BSEP) in complex with inhibitor GBM in nanodiscs
分子名称: 5-chloro-N-(2-{4-[(cyclohexylcarbamoyl)sulfamoyl]phenyl}ethyl)-2-methoxybenzamide, Bile salt export pump, CHOLESTEROL
著者Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
登録日2023-06-28
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
8PMD
DownloadVisualize
BU of 8pmd by Molmil
Nucleotide-bound BSEP in nanodiscs
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, MAGNESIUM ION
著者Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
登録日2023-06-28
公開日2023-11-22
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
8PMJ
DownloadVisualize
BU of 8pmj by Molmil
Vanadate-trapped BSEP in nanodiscs
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Bile salt export pump, ...
著者Liu, H, Irobalieva, R.N, Kowal, J, Ni, D, Nosol, K, Bang-Sorensen, R, Lancien, L, Stahlberg, H, Stieger, B, Locher, K.P.
登録日2023-06-28
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structural basis of bile salt extrusion and small-molecule inhibition in human BSEP.
Nat Commun, 14, 2023
3X2R
DownloadVisualize
BU of 3x2r by Molmil
Structure of the nonameric bacterial amyloid secretion channel CsgG
分子名称: CsgG
著者Huang, Y, Cao, B, Zhao, Y, Kou, Y, Ni, D, Zhang, X.C.
登録日2014-12-29
公開日2015-01-21
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the nonameric bacterial amyloid secretion channel
Proc.Natl.Acad.Sci.USA, 111, 2014
7TR6
DownloadVisualize
BU of 7tr6 by Molmil
Cascade complex from type I-A CRISPR-Cas system
分子名称: Cas11a, Cas5a, Cas7a, ...
著者Hu, C, Ni, D, Nam, K.H, Majumdar, S, McLean, J, Stahlberg, H, Terns, M, Ke, A.
登録日2022-01-28
公開日2022-08-10
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Allosteric control of type I-A CRISPR-Cas3 complexes and establishment as effective nucleic acid detection and human genome editing tools.
Mol.Cell, 82, 2022
4Q79
DownloadVisualize
BU of 4q79 by Molmil
Structure of a HG-derivative CsgG
分子名称: CsgG, MERCURY (II) ION
著者Huang, Y, Zhang, C.X, Cao, B, Zhao, Y, Kou, Y, Ni, D.
登録日2014-04-24
公開日2014-12-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of the nonameric bacterial amyloid secretion channel
Proc.Natl.Acad.Sci.USA, 111, 2014
7ESH
DownloadVisualize
BU of 7esh by Molmil
Crystal structure of amylosucrase from Calidithermus timidus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, amylosucrase
著者Tian, Y, Hou, X, Ni, D, Xu, W, Guang, C, Zhang, W, Rao, Y, Mu, W.
登録日2021-05-10
公開日2022-05-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structure-based interface engineering methodology in designing a thermostable amylose-forming transglucosylase
J.Biol.Chem., 298, 2022
8OZC
DownloadVisualize
BU of 8ozc by Molmil
cryoEM structure of SPARTA complex heterodimer apo
分子名称: Piwi domain-containing protein, TIR domain-containing protein
著者Ekundayo, B, Ni, D.C, Lu, X.H, Stahlberg, H.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
8OZD
DownloadVisualize
BU of 8ozd by Molmil
cryoEM structure of SPARTA complex dimer-3
分子名称: DNA (16-MER), Piwi domain-containing protein, RNA (18-MER), ...
著者Ekundayo, B, Ni, D.C, Lu, X.H, Stahlberg, H.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.89 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
4N75
DownloadVisualize
BU of 4n75 by Molmil
Structural Basis of BamA-mediate Outer Membrane Protein Biogenesis
分子名称: Outer membrane protein assembly factor BamA
著者Ni, D.C.
登録日2013-10-14
公開日2014-04-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献Structural and functional analysis of the beta-barrel domain of BamA from Escherichia coli.
Faseb J., 28, 2014
8OZE
DownloadVisualize
BU of 8oze by Molmil
cryoEM structure of SPARTA complex dimer high resolution
分子名称: DNA (5'-D(P*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*C)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*G)-3'), ...
著者Babatunde, E, Dong, C.N, Xu, H.L, Henning, S.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (2.91 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
8OZ6
DownloadVisualize
BU of 8oz6 by Molmil
cryoEM structure of SPARTA complex ligand-free
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ...
著者Babatunde, E, Dong, C.N, Xu, H.L, Henning, S.
登録日2023-05-08
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.97 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
8OZF
DownloadVisualize
BU of 8ozf by Molmil
cryoEM structure of SPARTA complex Tetramer Post-NAD cleavage-2
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), Piwi domain-containing protein, RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3'), ...
著者Babatunde, E, Dong, C.N, Xu, H.L, Henning, S.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.73 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
8OZG
DownloadVisualize
BU of 8ozg by Molmil
cryoEM structure of SPARTA complex Tetramer Post-NAD cleavage-1
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), MAGNESIUM ION, Piwi domain-containing protein, ...
著者Babatunde, E, Dong, C.N, Xu, H.L, Henning, S.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
8OZI
DownloadVisualize
BU of 8ozi by Molmil
cryoEM structure of SPARTA complex pre-NAD cleavage
分子名称: DNA (5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'), NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Piwi domain-containing protein, ...
著者Babatunde, E, Dong, C.N, Xu, H.L, Henning, S.
登録日2023-05-09
公開日2023-08-16
最終更新日2023-08-23
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Activation mechanism of a short argonaute-TIR prokaryotic immune system.
Sci Adv, 9, 2023
7EHR
DownloadVisualize
BU of 7ehr by Molmil
Levansucrase from Brenneria sp. EniD 312 at 1.33 angstroms resolution
分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Xu, W, Ni, D.W, Hou, X.D, Rao, Y.J, Pijning, T, Guskov, A, Mu, W.M.
登録日2021-03-30
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Crystal Structure of Levansucrase from the Gram-Negative Bacterium Brenneria Provides Insights into Its Product Size Specificity.
J.Agric.Food Chem., 70, 2022
7EHS
DownloadVisualize
BU of 7ehs by Molmil
Levansucrase from Brenneria sp. EniD 312
分子名称: GLYCEROL, Levansucrase, NONAETHYLENE GLYCOL, ...
著者Xu, W, Ni, D.W, Hou, X.D, Rao, Y.J, Pijning, T, Guskov, A, Mu, W.M.
登録日2021-03-30
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of Levansucrase from the Gram-Negative Bacterium Brenneria Provides Insights into Its Product Size Specificity.
J.Agric.Food Chem., 70, 2022
6M6I
DownloadVisualize
BU of 6m6i by Molmil
Structure of HSV2 B-capsid portal vertex
分子名称: Coiled coils chain 1, Coiled coils chain 2, Major capsid protein, ...
著者Wang, X.X, Wang, N.
登録日2020-03-14
公開日2021-03-10
実験手法ELECTRON MICROSCOPY (4.05 Å)
主引用文献Structures of the portal vertex reveal essential protein-protein interactions for Herpesvirus assembly and maturation.
Protein Cell, 11, 2020
6M6H
DownloadVisualize
BU of 6m6h by Molmil
Structure of HSV2 C-capsid portal vertex
分子名称: Capsid vertex component 1, Capsid vertex component 2, Large tegument protein deneddylase, ...
著者Wang, X.X, Wang, N.
登録日2020-03-14
公開日2021-03-24
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structures of the portal vertex reveal essential protein-protein interactions for Herpesvirus assembly and maturation.
Protein Cell, 11, 2020
6M6G
DownloadVisualize
BU of 6m6g by Molmil
Structure of HSV2 viron capsid portal vertex
分子名称: Capsid vertex component 1, Capsid vertex component 2, Coiled coils, ...
著者Wang, X.X, Wang, N.
登録日2020-03-14
公開日2021-03-24
実験手法ELECTRON MICROSCOPY (5.39 Å)
主引用文献Structures of the portal vertex reveal essential protein-protein interactions for Herpesvirus assembly and maturation.
Protein Cell, 11, 2020

220760

件を2024-06-05に公開中

PDB statisticsPDBj update infoContact PDBjnumon