Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1BIS
DownloadVisualize
BU of 1bis by Molmil
HIV-1 INTEGRASE CORE DOMAIN
分子名称: HIV-1 INTEGRASE
著者Goldgur, Y, Dyda, F, Hickman, A.B, Jenkins, T.M, Craigie, R, Davies, D.R.
登録日1998-06-19
公開日1998-08-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium.
Proc.Natl.Acad.Sci.USA, 95, 1998
1BIZ
DownloadVisualize
BU of 1biz by Molmil
HIV-1 INTEGRASE CORE DOMAIN
分子名称: CACODYLATE ION, HIV-1 INTEGRASE
著者Goldgur, Y, Dyda, F, Hickman, A.B, Jenkins, T.M, Craigie, R, Davies, D.R.
登録日1998-06-21
公開日1998-08-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium.
Proc.Natl.Acad.Sci.USA, 95, 1998
1BIU
DownloadVisualize
BU of 1biu by Molmil
HIV-1 INTEGRASE CORE DOMAIN COMPLEXED WITH MG++
分子名称: HIV-1 INTEGRASE, MAGNESIUM ION
著者Goldgur, Y, Dyda, F, Hickman, A.B, Jenkins, T.M, Craigie, R, Davies, D.R.
登録日1998-06-19
公開日1998-08-19
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium.
Proc.Natl.Acad.Sci.USA, 95, 1998
2VIH
DownloadVisualize
BU of 2vih by Molmil
CRYSTAL STRUCTURE OF THE IS608 TRANSPOSASE IN COMPLEX WITH Left END 26-MER DNA
分子名称: 5'-D(*AP*AP*AP*GP*CP*CP*CP*CP*TP*AP *GP*CP*TP*TP*TP*TP*AP*GP*CP*TP*AP*TP*GP*GP*GP*G)-3', TRANSPOSASE ORFA
著者Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
登録日2007-12-04
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
2VIC
DownloadVisualize
BU of 2vic by Molmil
CRYSTAL STRUCTURE OF THE ISHP608 TRANSPOSASE IN COMPLEX with Left end 26- mer DNA and manganese
分子名称: 5'-D(*AP*AP*AP*GP*CP*CP*CP*CP*TP*AP *GP*CP*TP*TP*TP*TP*AP*GP*CP*TP*AP*TP*GP*GP*GP*G)-3', MANGANESE (II) ION, TRANSPOSASE ORFA
著者Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
登録日2007-11-29
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
2VHG
DownloadVisualize
BU of 2vhg by Molmil
Crystal Structure of the ISHp608 Transposase in Complex with Right End 31-mer DNA
分子名称: MANGANESE (II) ION, RIGHT END 31-MER, TRANSPOSASE ORFA
著者Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
登録日2007-11-21
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
2VJV
DownloadVisualize
BU of 2vjv by Molmil
Crystal structure of the IS608 transposase in complex with left end 26-mer DNA hairpin and a 6-mer DNA representing the left end cleavage site
分子名称: 5'-D(*DA*DA*DA*DG*DC*DC*DC*DC*DT*DA*DG*DC*DTP*DT *DT*DT*DA*DG*DC*DT*DA*DT*DG*DG*DG*DGP)-3', 5'-D(*DT*DA*DT*DT*DA*DCP)-3', MAGNESIUM ION, ...
著者Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
登録日2007-12-13
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
2VJU
DownloadVisualize
BU of 2vju by Molmil
Crystal structure of the IS608 transposase in complex with the complete Right end 35-mer DNA and manganese
分子名称: MANGANESE (II) ION, RIGHT END 35-MER, TRANSPOSASE ORFA
著者Barabas, O, Ronning, D.R, Guynet, C, Hickman, A.B, Ton-Hoang, B, Chandler, M, Dyda, F.
登録日2007-12-13
公開日2008-02-19
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mechanism of is200/is605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection.
Cell(Cambridge,Mass.), 132, 2008
2V0X
DownloadVisualize
BU of 2v0x by Molmil
The dimerization domain of LAP2alpha
分子名称: LAMINA-ASSOCIATED POLYPEPTIDE 2 ISOFORMS ALPHA/ZETA
著者Bradley, C.M, Jones, S, Huang, Y, Suzuki, Y, Kvaratskhelia, M, Hickman, A.B, Craigie, R, Dyda, F.
登録日2007-05-20
公開日2007-06-26
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Basis for Dimerization of Lap2Alpha, a Component of the Nuclear Lamina.
Structure, 15, 2007
6FI8
DownloadVisualize
BU of 6fi8 by Molmil
Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex
分子名称: CALCIUM ION, DNA 29-MER (LE29), DNA 6-MER (T6'), ...
著者Morero, N.R, Barabas, O.
登録日2018-01-17
公開日2018-03-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Targeting IS608 transposon integration to highly specific sequences by structure-based transposon engineering.
Nucleic Acids Res., 46, 2018
8EDG
DownloadVisualize
BU of 8edg by Molmil
Cryo-EM structure of the Hermes transposase bound to two left-ends of its DNA transposon
分子名称: DNA (46-MER), DNA (5'-D(*GP*CP*GP*TP*GP*AP*A)-3'), DNA (55-MER), ...
著者Lannes, L, Dyda, F.
登録日2022-09-04
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (4.64 Å)
主引用文献Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Nat Commun, 14, 2023
8EB5
DownloadVisualize
BU of 8eb5 by Molmil
Tandem of Hermes transposase BED domain in complex with the quasi palindrome of its transposon left-end
分子名称: Hermes transposase BED domain, Hermes transposon left-end subterminal repeats 1 and 2, ZINC ION
著者Lannes, L, Dyda, F.
登録日2022-08-30
公開日2023-08-02
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Nat Commun, 14, 2023
8SJD
DownloadVisualize
BU of 8sjd by Molmil
Cryo-EM structure of the Hermes transposase bound to two right-ends of its DNA transposon.
分子名称: DNA (46-MER), DNA (55-MER), DNA (8-MER), ...
著者Lannes, L, Dyda, F.
登録日2023-04-17
公開日2023-08-02
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Nat Commun, 14, 2023
6XG8
DownloadVisualize
BU of 6xg8 by Molmil
ISCth4 transposase, pre-cleaved complex, PCC
分子名称: DNA (26-MER), Mutator family transposase
著者Kosek, D, Dyda, F.
登録日2020-06-17
公開日2020-10-14
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structures of ISCth4 transpososomes reveal the role of asymmetry in copy-out/paste-in DNA transposition.
Embo J., 40, 2021
6XGW
DownloadVisualize
BU of 6xgw by Molmil
ISCth4 transposase, pre-reaction complex, PRC
分子名称: DNA (32-MER), Mutator family transposase
著者Kosek, D, Dyda, F.
登録日2020-06-18
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structures of ISCth4 transpososomes reveal the role of asymmetry in copy-out/paste-in DNA transposition.
Embo J., 40, 2021
6XGX
DownloadVisualize
BU of 6xgx by Molmil
ISCth4 transposase, strand transfer complex 1, STC1
分子名称: DNA (21-MER), DNA (25-MER), DNA (47-MER), ...
著者Kosek, D, Dyda, F.
登録日2020-06-18
公開日2020-10-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structures of ISCth4 transpososomes reveal the role of asymmetry in copy-out/paste-in DNA transposition.
Embo J., 40, 2021
1IHW
DownloadVisualize
BU of 1ihw by Molmil
SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, 40 STRUCTURES
分子名称: HIV-1 INTEGRASE
著者Clore, G.M, Lodi, P.J, Ernst, J.A, Gronenborn, A.M.
登録日1995-05-12
公開日1996-07-11
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of HIV-1 integrase.
Biochemistry, 34, 1995
1IHV
DownloadVisualize
BU of 1ihv by Molmil
SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF HIV-1 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: HIV-1 INTEGRASE
著者Clore, G.M, Lodi, P.J, Ernst, J.A, Gronenborn, A.M.
登録日1995-05-12
公開日1996-10-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of HIV-1 integrase.
Biochemistry, 34, 1995
7LCC
DownloadVisualize
BU of 7lcc by Molmil
Helitron transposase bound to LTS
分子名称: Helraiser K1068Q, LTS, ZINC ION
著者Kosek, D, Dyda, F.
登録日2021-01-10
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.66 Å)
主引用文献The large bat Helitron DNA transposase forms a compact monomeric assembly that buries and protects its covalently bound 5'-transposon end.
Mol.Cell, 81, 2021
6NSN
DownloadVisualize
BU of 6nsn by Molmil
TetR family transcriptional regulator CifR C99T-C181R Cysteines mutant complexed with 26bp double-strand operator DNA
分子名称: DNA (26-MER), TetR family transcriptional regulator CifR
著者He, S, Madden, D.R.
登録日2019-01-25
公開日2020-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
6NSR
DownloadVisualize
BU of 6nsr by Molmil
TetR family transcriptional regulator CifR C99T-C181R cysteine mutant complexed with 26bp double-strand operator DNA and apo-CifR C99T-C181R
分子名称: DNA (26-MER), TetR family transcriptional regulator CifR
著者He, S, Taher, N.M, Madden, D.R.
登録日2019-01-25
公開日2020-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
6NSM
DownloadVisualize
BU of 6nsm by Molmil
TetR family transcriptional regulator CifR C99T-C107S-C181R Cysteines mutant complexed with 26bp double-strand operator DNA
分子名称: DNA (26-MER), TetR family transcriptional regulator CifR
著者He, S, Madden, D.R.
登録日2019-01-25
公開日2020-01-29
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular basis for the transcriptional regulation of an epoxide-based virulence circuit in Pseudomonas aeruginosa
Biorxiv, 2024
2ITG
DownloadVisualize
BU of 2itg by Molmil
CATALYTIC DOMAIN OF HIV-1 INTEGRASE: ORDERED ACTIVE SITE IN THE F185H CONSTRUCT
分子名称: HUMAN IMMUNODEFICIENCY VIRUS-1 INTEGRASE
著者Bujacz, G, Alexandratos, J, Wlodawer, A, Zhou-Liu, Q, Clement-Mella, C.
登録日1996-09-13
公開日1997-03-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献The catalytic domain of human immunodeficiency virus integrase: ordered active site in the F185H mutant.
FEBS Lett., 398, 1996
1BHL
DownloadVisualize
BU of 1bhl by Molmil
CACODYLATED CATALYTIC DOMAIN OF HIV-1 INTEGRASE
分子名称: HIV-1 INTEGRASE
著者Maignan, S, Guilloteau, J.P, Zhou-Liu, Q, Clement-Mella, C, Mikol, V.
登録日1998-06-10
公開日1998-10-14
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases.
J.Mol.Biol., 282, 1998
1BL3
DownloadVisualize
BU of 1bl3 by Molmil
CATALYTIC DOMAIN OF HIV-1 INTEGRASE
分子名称: INTEGRASE, MAGNESIUM ION
著者Maignan, S, Guilloteau, J.P, Zhou-Liu, Q, Clement-Mella, C, Mikol, V.
登録日1998-07-23
公開日1998-09-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structures of the catalytic domain of HIV-1 integrase free and complexed with its metal cofactor: high level of similarity of the active site with other viral integrases.
J.Mol.Biol., 282, 1998

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon