Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8IZE
DownloadVisualize
BU of 8ize by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 in complex with 4-HMBPP
分子名称: Butyrophilin subfamily 3 member A1, DI(HYDROXYETHYL)ETHER, [(E)-3-(hydroxymethyl)pent-2-enyl] phosphono hydrogen phosphate
著者Yang, Y.Y, Yi, S.M, Huang, J.W, Chen, C.C, Guo, R.T.
登録日2023-04-07
公開日2023-09-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Nature, 621, 2023
5YGS
DownloadVisualize
BU of 5ygs by Molmil
Human TNFRSF25 death domain
分子名称: Human TNRSF25 death domain, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yin, X, Jin, T.
登録日2017-09-26
公開日2018-10-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.691 Å)
主引用文献Crystal structure and activation mechanism of DR3 death domain.
Febs J., 286, 2019
5ZJK
DownloadVisualize
BU of 5zjk by Molmil
Structure of myroilysin
分子名称: Myroilysin, PHOSPHATE ION, ZINC ION
著者Li, W.D, Ran, T.T, Xu, D.Q, Wang, W.W.
登録日2018-03-20
公開日2019-03-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of mature myroilysin and implication for its activation mechanism.
Int.J.Biol.Macromol., 2019
6GF6
DownloadVisualize
BU of 6gf6 by Molmil
Molecular basis of egg coat filament cross-linking: high-resolution structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF7
DownloadVisualize
BU of 6gf7 by Molmil
Molecular basis of egg coat filament cross-linking: Zn-SAD structure of the partially deglycosylated ZP1 ZP-N1 domain homodimer
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ZINC ION, Zona pellucida sperm-binding protein 1,Zona pellucida sperm-binding protein 1
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
6GF8
DownloadVisualize
BU of 6gf8 by Molmil
Molecular basis of egg coat filament cross-linking: structure of the glycosylated ZP1 ZP-N1 domain homodimer
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Nishimura, K, Jovine, L.
登録日2018-04-29
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Molecular basis of egg coat cross-linking sheds light on ZP1-associated female infertility.
Nat Commun, 10, 2019
5ZBZ
DownloadVisualize
BU of 5zbz by Molmil
Crystal structure of the DEAD domain of Human eIF4A with sanguinarine
分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Eukaryotic initiation factor 4A-I, MALONATE ION
著者Ding, Y, Ding, L.
登録日2018-02-14
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.30860257 Å)
主引用文献Targeting the N Terminus of eIF4AI for Inhibition of Its Catalytic Recycling.
Cell Chem Biol, 26, 2019
5ZNZ
DownloadVisualize
BU of 5znz by Molmil
Structure of mDR3 DD with MBP tag mutant-I387V
分子名称: Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25, SULFATE ION
著者Jin, T, Yin, X.
登録日2018-04-12
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure and activation mechanism of DR3 death domain.
Febs J., 286, 2019
5ZNY
DownloadVisualize
BU of 5zny by Molmil
Structure of mDR3_DD-C363G with MBP tag
分子名称: Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25, SULFATE ION
著者Yin, X, Jin, T.
登録日2018-04-11
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Crystal structure and activation mechanism of DR3 death domain.
Febs J., 286, 2019
3RY0
DownloadVisualize
BU of 3ry0 by Molmil
Crystal structure of TomN, a 4-Oxalocrotonate Tautomerase homologue in Tomaymycin biosynthetic pathway
分子名称: Putative tautomerase
著者Zhang, Y, Yan, W.P, Li, W.Z, Whitman, C.P.
登録日2011-05-10
公開日2011-08-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Kinetic, Crystallographic, and Mechanistic Characterization of TomN: Elucidation of a Function for a 4-Oxalocrotonate Tautomerase Homologue in the Tomaymycin Biosynthetic Pathway.
Biochemistry, 50, 2011
8DI5
DownloadVisualize
BU of 8di5 by Molmil
Cryo-EM structure of SARS-CoV-2 Beta (B.1.351) spike protein in complex with VH domain F6 (focused refinement of RBD and VH F6)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, VH F6
著者Zhu, X, Saville, J.W, Mannar, D, Berezuk, A.M, Subramaniam, S.
登録日2022-06-28
公開日2022-08-24
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Potent and broad neutralization of SARS-CoV-2 variants of concern (VOCs) including omicron sub-lineages BA.1 and BA.2 by biparatopic human VH domains.
Iscience, 25, 2022
8D5P
DownloadVisualize
BU of 8d5p by Molmil
Mouse TCR TG6
分子名称: TCR-alpha, TCR-beta
著者Wang, Y, Dai, S.
登録日2022-06-05
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
Front Immunol, 13, 2022
8D5N
DownloadVisualize
BU of 8d5n by Molmil
Crystal structure of Ld-HF10
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, ...
著者Wang, Y, Dai, S.
登録日2022-06-05
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
Front Immunol, 13, 2022
8D5Q
DownloadVisualize
BU of 8d5q by Molmil
TCR TG6 in complex with Ld-HF10
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Dense granule protein 6, HF10 peptide, ...
著者Wang, Y, Dai, S.
登録日2022-06-05
公開日2022-09-14
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Peptide Centric V beta Specific Germline Contacts Shape a Specialist T Cell Response.
Front Immunol, 13, 2022
2M01
DownloadVisualize
BU of 2m01 by Molmil
Solution structure of Kunitz-type neurotoxin LmKKT-1a from scorpion venom
分子名称: Protease inhibitor LmKTT-1a
著者Luo, F, Jiang, L, Liu, M, Chen, Z, Wu, Y.
登録日2012-10-15
公開日2013-11-13
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Genomic and structural characterization of Kunitz-type peptide LmKTT-1a highlights diversity and evolution of scorpion potassium channel toxins.
Plos One, 8, 2013
6J2S
DownloadVisualize
BU of 6j2s by Molmil
Structure of HitA bound to gallium from Pseudomonas aeruginosa
分子名称: Ferric iron-binding periplasmic protein, GALLIUM (III) ION, PHOSPHATE ION
著者Guo, Y, Li, H.Y, Sun, H.Z, Xia, W.
登録日2019-01-02
公開日2020-01-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73005116 Å)
主引用文献Identification and Characterization of a Metalloprotein Involved in Gallium Internalization in Pseudomonas aeruginosa.
Acs Infect Dis., 5, 2019
5EIB
DownloadVisualize
BU of 5eib by Molmil
Crystal structure of CPAP PN2-3 C-terminal loop-helix in complex with DARPin-tubulin
分子名称: Designed ankyrin repeat protein, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Li, H, Zheng, X.
登録日2015-10-29
公開日2016-10-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Molecular basis for CPAP-tubulin interaction in controlling centriolar and ciliary length
Nat Commun, 7, 2016
2GJJ
DownloadVisualize
BU of 2gjj by Molmil
Crystal structure of a single chain antibody scA21 against Her2/ErbB2
分子名称: A21 single-chain antibody fragment against erbB2, GLYCEROL
著者Zhu, Z.
登録日2006-03-31
公開日2006-10-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Epitope mapping and structural analysis of an anti-ErbB2 antibody A21: Molecular basis for tumor inhibitory mechanism
Proteins, 70, 2007
8DIQ
DownloadVisualize
BU of 8diq by Molmil
Tubulin-RB3_SLD-TTL in complex with SB226
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 4-[2-(ethylamino)-6,7-dihydro-5H-cyclopenta[d]pyrimidin-4-yl]-7-methoxy-3,4-dihydroquinoxalin-2(1H)-one, CALCIUM ION, ...
著者White, S.W, Yun, M.
登録日2022-06-29
公開日2023-01-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.395 Å)
主引用文献SB226, an inhibitor of tubulin polymerization, inhibits paclitaxel-resistant melanoma growth and spontaneous metastasis.
Cancer Lett., 555, 2022
5Z9T
DownloadVisualize
BU of 5z9t by Molmil
a new PL6 alginate lyase complex with trisaccharide
分子名称: GLYCEROL, MALONATE ION, SODIUM ION, ...
著者Liu, W.Z, Lyu, Q.Q, Zhang, K.K, Li, Z.J.
登録日2018-02-05
公開日2019-03-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution.
Biochim Biophys Acta Gen Subj, 1863, 2019
6RWO
DownloadVisualize
BU of 6rwo by Molmil
SIVrcm intasome (Q148H/G140S) in complex with bictegravir
分子名称: Bictegravir, CHLORIDE ION, DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3'), ...
著者Cherepanov, P, Nans, A, Cook, N.
登録日2019-06-05
公開日2020-02-05
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structural basis of second-generation HIV integrase inhibitor action and viral resistance.
Science, 367, 2020
6RWL
DownloadVisualize
BU of 6rwl by Molmil
SIVrcm intasome
分子名称: DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*AP*AP*GP*AP*AP*AP*AP*AP*TP*CP*TP*CP*TP*AP*CP*CP*A)-3'), Pol protein, ...
著者Cherepanov, P, Nans, A, Cook, N.
登録日2019-06-05
公開日2020-02-05
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.36 Å)
主引用文献Structural basis of second-generation HIV integrase inhibitor action and viral resistance.
Science, 367, 2020
6RWN
DownloadVisualize
BU of 6rwn by Molmil
SIVrcm intasome in complex with dolutegravir
分子名称: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, CHLORIDE ION, DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3'), ...
著者Cherepanov, P, Nans, A, Cook, N.
登録日2019-06-05
公開日2020-02-05
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural basis of second-generation HIV integrase inhibitor action and viral resistance.
Science, 367, 2020
6RWM
DownloadVisualize
BU of 6rwm by Molmil
SIVrcm intasome in complex with bictegravir
分子名称: Bictegravir, CHLORIDE ION, DNA (5'-D(*AP*AP*CP*TP*GP*GP*TP*AP*GP*AP*GP*AP*TP*TP*TP*TP*TP*CP*TP*TP*AP*GP*C)-3'), ...
著者Cherepanov, P, Nans, A, Cook, N.
登録日2019-06-05
公開日2020-02-05
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Structural basis of second-generation HIV integrase inhibitor action and viral resistance.
Science, 367, 2020
6SKM
DownloadVisualize
BU of 6skm by Molmil
Structure of the native full-length HIV-1 capsid protein A92E in helical assembly (-13,12)
分子名称: Gag protein
著者Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
登録日2019-08-16
公開日2020-08-26
最終更新日2022-03-30
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020

221051

件を2024-06-12に公開中

PDB statisticsPDBj update infoContact PDBjnumon