Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
9BEO
DownloadVisualize
BU of 9beo by Molmil
Tungstate binding protein (Tungbindin) from Eubacterium limosum with 7.5 tungstates bound
分子名称: Molybdenum-pterin binding domain-containing protein, TUNGSTATE(VI)ION
著者Zhou, D, Rose, J.P, Chen, L, Wang, B.C.
登録日2024-04-16
公開日2024-09-04
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Tungstate binding protein (Tungbindin) from Eubacterium limosum with 7.5 tungstates bound
To Be Published
4OU3
DownloadVisualize
BU of 4ou3 by Molmil
Crystal structure of porcine aminopeptidase N complexed with CNGRCG tumor-homing peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Liu, C, Yang, Y, Chen, L, Lin, Y.-L, Li, F.
登録日2014-02-14
公開日2014-11-05
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Unified Mechanism for Aminopeptidase N-based Tumor Cell Motility and Tumor-homing Therapy.
J.Biol.Chem., 289, 2014
9D2C
DownloadVisualize
BU of 9d2c by Molmil
Crystal Structure of Tungbindin Treated with Proteinase K
分子名称: MOLYBDATE ION, Molybdenum-pterin binding domain-containing protein
著者Zhou, D, Chen, L, Rose, J.P, Wang, B.C.
登録日2024-08-08
公開日2024-09-04
最終更新日2025-04-16
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Storage of the vital metal tungsten in a dominant SCFA-producing human gut microbe Eubacterium limosum and implications for other gut microbes.
Mbio, 16, 2025
5X74
DownloadVisualize
BU of 5x74 by Molmil
The crystal Structure PDE delta in complex with compound (R, R)-1g
分子名称: (2R)-2-(2-fluorophenyl)-3-[2-[4-[(2R)-2-(2-fluorophenyl)-4-oxidanylidene-1,2-dihydroquinazolin-3-yl]piperidin-1-yl]ethyl]-1,2-dihydroquinazolin-4-one, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
著者Jiang, Y, Zhuang, C, Chen, L, Wang, R, Wang, F, Sheng, C.
登録日2017-02-23
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural Biology-Inspired Discovery of Novel KRAS-PDE delta Inhibitors
J. Med. Chem., 60, 2017
5X73
DownloadVisualize
BU of 5x73 by Molmil
The crystal Structure PDE delta in complex with R-p9
分子名称: (2R)-2-(2-fluorophenyl)-3-phenyl-1,2-dihydroquinazolin-4-one, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
著者Jiang, Y, Zhuang, C, Chen, L, Wang, R, Wang, F, Sheng, C.
登録日2017-02-23
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Biology-Inspired Discovery of Novel KRAS-PDE delta Inhibitors
J. Med. Chem., 60, 2017
9GH7
DownloadVisualize
BU of 9gh7 by Molmil
Complex of human TfR1 with a potent bicyclic peptide
分子名称: 1-(3,5-diethanoyl-1,3,5-triazinan-1-yl)ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Bicyclic peptide, ...
著者Pellegrino, S, Pernigo, S, Swan, M.K, Bezerra, G.A, Chen, L.
登録日2024-08-15
公開日2025-04-30
実験手法X-RAY DIFFRACTION (2.079 Å)
主引用文献Conjugation to a transferrin receptor 1-binding Bicycle peptide enhances ASO and siRNA potency in skeletal and cardiac muscles.
Nucleic Acids Res., 53, 2025
1RYQ
DownloadVisualize
BU of 1ryq by Molmil
Putative DNA-directed RNA polymerase, subunit e'' from Pyrococcus Furiosus Pfu-263306-001
分子名称: DNA-directed RNA polymerase, subunit e'', ZINC ION
著者Liu, Z.-J, Chen, L, Tempel, W, Shah, A, Arendall III, W.B, Rose, J.P, Brereton, P.S, Izumi, M, Jenney Jr, F.E, Lee, H.S, Poole II, F.L, Shah, C, Sugar, F.J, Adams, M.W.W, Richardson, D.C, Richardson, J.S, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-12-22
公開日2004-08-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Parameter-space screening: a powerful tool for high-throughput crystal structure determination.
Acta Crystallogr.,Sect.D, 61, 2005
6LR0
DownloadVisualize
BU of 6lr0 by Molmil
structure of human bile salt exporter ABCB11
分子名称: Bile salt export pump
著者Wang, L, Hou, W.T, Chen, L, Jiang, Y.L, Xu, D, Sun, L.F, Zhou, C.Z, Chen, Y.
登録日2020-01-15
公開日2020-04-15
最終更新日2023-01-18
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo-EM structure of human bile salts exporter ABCB11.
Cell Res., 30, 2020
4QE9
DownloadVisualize
BU of 4qe9 by Molmil
Open MthK pore structure soaked in 10 mM Ba2+/100 mM K+
分子名称: Calcium-gated potassium channel MthK, POTASSIUM ION
著者Guo, R, Zeng, W, Cui, H, Chen, L, Ye, S.
登録日2014-05-15
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Ionic interactions of Ba2+ blockades in the MthK K+ channel
J.Gen.Physiol., 144, 2014
4Q5J
DownloadVisualize
BU of 4q5j by Molmil
Crystal structure of SeMet derivative BRI1 in complex with BKI1
分子名称: BRI1 kinase inhibitor 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein BRASSINOSTEROID INSENSITIVE 1
著者Wang, J, Wang, J, Chen, L, Wu, J.W, Wang, Z.X.
登録日2014-04-17
公開日2014-10-29
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.772 Å)
主引用文献Structural insights into the negative regulation of BRI1 signaling by BRI1-interacting protein BKI1.
Cell Res., 24, 2014
4QE7
DownloadVisualize
BU of 4qe7 by Molmil
Open MthK pore structure soaked in 10 mM Ba2+/100 mM Na+
分子名称: BARIUM ION, Calcium-gated potassium channel MthK
著者Guo, R, Zeng, W, Cui, H, Chen, L, Ye, S.
登録日2014-05-15
公開日2014-07-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ionic interactions of Ba2+ blockades in the MthK K+ channel
J.Gen.Physiol., 144, 2014
4ERG
DownloadVisualize
BU of 4erg by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, FE (III) ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-20
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.789 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
4EPK
DownloadVisualize
BU of 4epk by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, MAGNESIUM ION, ZINC ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-17
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.6009 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
4ERA
DownloadVisualize
BU of 4era by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, COBALT (II) ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-19
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
3NSQ
DownloadVisualize
BU of 3nsq by Molmil
Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron
分子名称: 1,8-dihydroxyanthracene-9,10-dione, Retinoid X receptor, alpha
著者Zhang, H, Hu, T, Li, L, Zhou, R, Chen, L, Hu, L, Jiang, H, Shen, X.
登録日2010-07-02
公開日2010-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor.
J.Biol.Chem., 286, 2011
4ERI
DownloadVisualize
BU of 4eri by Molmil
Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
分子名称: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, MAGNESIUM ION, ZINC ION
著者Huo, L, Fielding, A.J, Chen, Y, Li, T, Iwaki, H, Hosler, J.P, Chen, L, Hasegawa, Y, Que Jr, L, Liu, A.
登録日2012-04-20
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.0006 Å)
主引用文献Evidence for a Dual Role of an Active Site Histidine in alpha-Amino-beta-Carboxymuconate-epsilon-Semialdehyde Decarboxylase
Biochemistry, 51, 2012
4U6V
DownloadVisualize
BU of 4u6v by Molmil
Mechanisms of Neutralization of a Human Anti-Alpha Toxin Antibody
分子名称: Alpha-hemolysin, Fab, antigen binding fragment, ...
著者Oganesyan, V.Y, Peng, L, Damschroder, M.M, Cheng, L, Sadowska, A, Tkaczyk, C, Sellman, B, Wu, H, Dall'Acqua, W.F.
登録日2014-07-29
公開日2014-09-17
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.56 Å)
主引用文献Mechanisms of Neutralization of a Human Anti-alpha-toxin Antibody.
J.Biol.Chem., 289, 2014
4HLT
DownloadVisualize
BU of 4hlt by Molmil
Crystal structure of ferric E32V Pirin
分子名称: FE (II) ION, Pirin
著者Liu, F, Rehmani, I, Esaki, S, Fu, R, Chen, L, Serrano, V, Liu, A.
登録日2012-10-17
公開日2013-05-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Pirin is an iron-dependent redox regulator of NF-kappa B.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HVR
DownloadVisualize
BU of 4hvr by Molmil
X-ray crystal structure of salicylic acid bound 3-hydroxyanthranilate-3,4-dioxygenase from cupriavidus metallidurans
分子名称: 2-HYDROXYBENZOIC ACID, 3-hydroxyanthranilate 3,4-dioxygenase, FE (III) ION
著者Liu, F, Chen, L, Liu, A.
登録日2012-11-06
公開日2013-11-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-ray crystal structure of salicylic acid bound 3-hydroxyanthranilate-3,4-dioxygenase from cupriavidus metallidurans
To be Published
7XUZ
DownloadVisualize
BU of 7xuz by Molmil
Crystal structure of a HDAC4-MEF2A-DNA ternary complex
分子名称: DNA (5'-D(*TP*CP*TP*TP*AP*TP*AP*AP*AP*TP*AP*GP*T)-3'), DNA (5'-D(P*AP*CP*TP*AP*TP*TP*TP*AP*TP*AP*A)-3'), Histone deacetylase 4, ...
著者Dai, S.Y, Guo, L, Dey, R, Guo, M, Bates, D, Cayford, J, Chen, X.J, Wei, X.D, Chen, L, Chen, Y.H.
登録日2022-05-20
公開日2023-11-29
最終更新日2024-06-12
実験手法X-RAY DIFFRACTION (3.591 Å)
主引用文献Structural insights into the HDAC4-MEF2A-DNA complex and its implication in long-range transcriptional regulation.
Nucleic Acids Res., 52, 2024
4GVL
DownloadVisualize
BU of 4gvl by Molmil
Crystal Structure of the GsuK RCK domain
分子名称: ADENOSINE MONOPHOSPHATE, CALCIUM ION, TrkA domain protein, ...
著者Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
登録日2012-08-30
公開日2012-12-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
4K23
DownloadVisualize
BU of 4k23 by Molmil
Structure of anti-uPAR Fab ATN-658
分子名称: anti-uPAR antibody, heavy chain, light chain
著者Yuan, C, Huang, M, Chen, L.
登録日2013-04-08
公開日2014-02-26
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Identification of a New Epitope in uPAR as a Target for the Cancer Therapeutic Monoclonal Antibody ATN-658, a Structural Homolog of the uPAR Binding Integrin CD11b ( alpha M)
Plos One, 9, 2014
4HSL
DownloadVisualize
BU of 4hsl by Molmil
2.00 angstrom x-ray crystal structure of substrate-bound E110A 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
分子名称: 3-HYDROXYANTHRANILIC ACID, 3-hydroxyanthranilate 3,4-dioxygenase, FE (II) ION
著者Liu, F, Chen, L, Liu, A.
登録日2012-10-30
公開日2013-11-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献2.00 angstrom x-ray crystal structure of substrate-bound E110A 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
To be Published
2Q0O
DownloadVisualize
BU of 2q0o by Molmil
Crystal structure of an anti-activation complex in bacterial quorum sensing
分子名称: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, Probable transcriptional activator protein traR, Probable transcriptional repressor traM
著者Chen, G, Jeffrey, P.D, Fuqua, C, Shi, Y, Chen, L.
登録日2007-05-22
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for antiactivation in bacterial quorum sensing.
Proc.Natl.Acad.Sci.Usa, 104, 2007
7YE9
DownloadVisualize
BU of 7ye9 by Molmil
SARS-CoV-2 Spike (6P) in complex with 3 R1-32 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of R1-32 Fab, ...
著者Liu, B, Gao, X, Li, Z, Chen, X, He, J, Chen, L, Xiong, X.
登録日2022-07-05
公開日2022-08-24
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (4.17 Å)
主引用文献SARS-CoV-2 Delta and Omicron variants evade population antibody response by mutations in a single spike epitope.
Nat Microbiol, 7, 2022

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon