Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5NUF
DownloadVisualize
BU of 5nuf by Molmil
Cytosolic Malate Dehydrogenase 1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Young, D, Messens, J, Huang, J, Reichheld, J.-P.
登録日2017-04-29
公開日2018-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Self-protection of cytosolic malate dehydrogenase against oxidative stress in Arabidopsis.
J. Exp. Bot., 69, 2018
1XYL
DownloadVisualize
BU of 1xyl by Molmil
THE ROLE OF THE DIVALENT METAL ION IN SUGAR BINDING, RING OPENING, AND ISOMERIZATION BY D-XYLOSE ISOMERASE: REPLACEMENT OF A CATALYTIC METAL BY AN AMINO-ACID
分子名称: HYDROXIDE ION, MAGNESIUM ION, XYLOSE ISOMERASE
著者Allen, K.N, Lavie, A, Petsko, G.A, Ringe, D.
登録日1993-12-07
公開日1994-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Role of the divalent metal ion in sugar binding, ring opening, and isomerization by D-xylose isomerase: replacement of a catalytic metal by an amino acid.
Biochemistry, 33, 1994
6FMC
DownloadVisualize
BU of 6fmc by Molmil
Neuropilin1-b1 domain in complex with EG01377, 0.9 Angstrom structure
分子名称: (2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzofuran-7-yl]sulfonylamino]thiophen-2-yl]carbonylamino]-5-carbamimidamido-pentanoic acid, Neuropilin-1
著者Yelland, T, Djordjevic, S, Fotinou, K, Selwood, D, Zachary, I, Frankel, P.
登録日2018-01-30
公開日2018-10-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Small Molecule Neuropilin-1 Antagonists Combine Antiangiogenic and Antitumor Activity with Immune Modulation through Reduction of Transforming Growth Factor Beta (TGF beta ) Production in Regulatory T-Cells.
J. Med. Chem., 61, 2018
1XYC
DownloadVisualize
BU of 1xyc by Molmil
X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS
分子名称: 3-O-METHYLFRUCTOSE IN LINEAR FORM, MAGNESIUM ION, XYLOSE ISOMERASE
著者Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D.
登録日1994-01-03
公開日1994-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis.
Biochemistry, 33, 1994
1HCZ
DownloadVisualize
BU of 1hcz by Molmil
LUMEN-SIDE DOMAIN OF REDUCED CYTOCHROME F AT-35 DEGREES CELSIUS
分子名称: CYTOCHROME F, PROTOPORPHYRIN IX CONTAINING FE
著者Martinez, S.E, Huang, D, Szczepaniak, A, Cramer, W.A, Smith, J.L.
登録日1996-09-18
公開日1997-03-12
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献The heme redox center of chloroplast cytochrome f is linked to a buried five-water chain.
Protein Sci., 5, 1996
3B3J
DownloadVisualize
BU of 3b3j by Molmil
The 2.55 A crystal structure of the apo catalytic domain of coactivator-associated arginine methyl transferase I(CARM1:28-507, residues 28-146 and 479-507 not ordered)
分子名称: BENZAMIDINE, Histone-arginine methyltransferase CARM1
著者Troffer-Charlier, N, Cura, V, Hassenboehler, P, Moras, D, Cavarelli, J.
登録日2007-10-22
公開日2007-11-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Functional insights from structures of coactivator-associated arginine methyltransferase 1 domains.
Embo J., 26, 2007
3UPA
DownloadVisualize
BU of 3upa by Molmil
A general strategy for the generation of human antibody variable domains with increased aggregation resistance
分子名称: kappa light chain variable domain
著者Dudgeon, K, Rouet, R, Kokmeijer, I, Langley, D.B, Christ, D.
登録日2011-11-17
公開日2012-06-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献General strategy for the generation of human antibody variable domains with increased aggregation resistance
Proc.Natl.Acad.Sci.USA, 109, 2012
1XYB
DownloadVisualize
BU of 1xyb by Molmil
X-RAY CRYSTALLOGRAPHIC STRUCTURES OF D-XYLOSE ISOMERASE-SUBSTRATE COMPLEXES POSITION THE SUBSTRATE AND PROVIDE EVIDENCE FOR METAL MOVEMENT DURING CATALYSIS
分子名称: D-glucose, MAGNESIUM ION, XYLOSE ISOMERASE
著者Lavie, A, Allen, K.N, Petsko, G.A, Ringe, D.
登録日1994-01-03
公開日1994-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献X-ray crystallographic structures of D-xylose isomerase-substrate complexes position the substrate and provide evidence for metal movement during catalysis.
Biochemistry, 33, 1994
1H66
DownloadVisualize
BU of 1h66 by Molmil
CRYSTAL STRUCTURE OF HUMAN NAD[P]H-QUINONE OXIDOREDUCTASE CO WITH 2,5-diaziridinyl-3-hydroxyl-6-methyl-1,4-benzoquinone
分子名称: 2,5-DIAZIRIDIN-1-YL-3-(HYDROXYMETHYL)-6-METHYLCYCLOHEXA-2,5-DIENE-1,4-DIONE, FLAVIN-ADENINE DINUCLEOTIDE, NAD(P)H DEHYDROGENASE [QUINONE] 1
著者Faig, M, Bianchet, M.A, Winski, S, Ross, D, Amzel, L.M.
登録日2001-06-06
公開日2001-09-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-Based Development of Anticancer Drugs: Complexes of Nad(P)H:Quinone Oxidoreductase 1 with Chemotherapeutic Quinones
Structure, 9, 2001
5NU5
DownloadVisualize
BU of 5nu5 by Molmil
Crystal structure of the human bromodomain of EP300 bound to the inhibitor XDM-CBP
分子名称: 1,2-ETHANEDIOL, Histone acetyltransferase p300, ~{N}-[[2,8-bis(oxidanyl)naphthalen-1-yl]methyl]-4-ethanoyl-3-ethyl-5-methyl-1~{H}-pyrrole-2-carboxamide
著者Huegle, M, Wohlwend, D.
登録日2017-04-28
公開日2017-08-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Beyond the BET Family: Targeting CBP/p300 with 4-Acyl Pyrroles.
Angew. Chem. Int. Ed. Engl., 56, 2017
5NUE
DownloadVisualize
BU of 5nue by Molmil
Cytosolic Malate Dehydrogenase 1 (peroxide-treated)
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-ETHOXYETHANOL, ...
著者Young, D, Messens, J, Huang, J, Reichheld, J.-P.
登録日2017-04-29
公開日2018-02-28
最終更新日2018-07-04
実験手法X-RAY DIFFRACTION (1.35000277 Å)
主引用文献Self-protection of cytosolic malate dehydrogenase against oxidative stress in Arabidopsis.
J. Exp. Bot., 69, 2018
5O7M
DownloadVisualize
BU of 5o7m by Molmil
Single-shot pink beam serial crystallography: Phycocyanin (One chip, chip_1)
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
著者Meents, A, Oberthuer, D, Lieske, J, Srajer, V, Sarrou, I.
登録日2017-06-09
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Pink-beam serial crystallography.
Nat Commun, 8, 2017
1H41
DownloadVisualize
BU of 1h41 by Molmil
Pseudomonas cellulosa E292A alpha-D-glucuronidase mutant complexed with aldotriuronic acid
分子名称: 1,2-ETHANEDIOL, 4-O-methyl-alpha-D-glucopyranuronic acid, ALPHA-GLUCURONIDASE, ...
著者Nurizzo, D, Nagy, T, Gilbert, H.J, Davies, G.J.
登録日2002-09-25
公開日2003-05-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Alpha-Glucuronidase,Glca67A,of Cellvibrio Japonicus Utilizes the Carboxylate and Methyl Groups of Aldobiouronic Acid as Important Substrate Recognition Determinants
J.Biol.Chem., 278, 2003
3BXS
DownloadVisualize
BU of 3bxs by Molmil
Crystal Structures Of Highly Constrained Substrate And Hydrolysis Products Bound To HIV-1 Protease. Implications For Catalytic Mechanism
分子名称: (9S,12S)-9-(1-methylethyl)-7,10-dioxo-2-oxa-8,11-diazabicyclo[12.2.2]octadeca-1(16),14,17-triene-12-carboxylic acid, Protease, SULFATE ION
著者Tyndall, J.D, Pattenden, L.K, Reid, R.C, Hu, S.H, Alewood, D, Alewood, P.F, Walsh, T, Fairlie, D.P, Martin, J.L.
登録日2008-01-14
公開日2008-03-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structures of Highly Constrained Substrate and Hydrolysis Products Bound to HIV-1 Protease. Implications for the Catalytic Mechanism
Biochemistry, 47, 2008
1PZ2
DownloadVisualize
BU of 1pz2 by Molmil
Crystal structure of a transient covalent reaction intermediate of a family 51 alpha-L-arabinofuranosidase
分子名称: Alpha-L-arabinofuranosidase, alpha-L-arabinofuranose
著者Hoevel, K, Shallom, D, Niefind, K, Belakhov, V, Shoham, G, Baasov, T, Shoham, Y, Schomburg, D.
登録日2003-07-09
公開日2003-10-07
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure and snapshots along the reaction pathway of a family 51 alpha-L-arabinofuranosidase
Embo J., 22, 2003
1H38
DownloadVisualize
BU of 1h38 by Molmil
Structure of a T7 RNA polymerase elongation complex at 2.9A resolution
分子名称: 5'-D(*GP*GP*GP*AP*AP*TP*CP*GP*AP*CP *AP*TP*CP*GP*CP*CP*GP*C)-3', 5'-D(*GP*TP*CP*GP*AP*TP*TP*CP*CP*CP)-3', 5'-R(*AP*AP*CP*UP*GP*CP*GP*GP*CP*GP *AP*U)-3', ...
著者Tahirov, T.H, Temyakov, D, Anikin, M, Patlan, V, McAllister, W.T, Vassylyev, D.G, Yokoyama, S.
登録日2002-08-24
公開日2002-11-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of a T7 RNA Polymerase Elongation Complex at 2.9 A Resolution
Nature, 420, 2002
1HHN
DownloadVisualize
BU of 1hhn by Molmil
Calreticulin P-domain
分子名称: CALRETICULIN
著者Ellgaard, L, Riek, R, Herrmann, T, Guntert, P, Braun, D, Helenius, A, Wuthrich, K.
登録日2000-12-22
公開日2001-03-08
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR Structure of the Calreticulin P-Domain
Proc.Natl.Acad.Sci.USA, 98, 2001
3HG0
DownloadVisualize
BU of 3hg0 by Molmil
Crystal structure of a DARPin in complex with ORF49 from Lactococcal phage TP901-1
分子名称: Baseplate protein, Designed Ankyrin Repeat Protein (DARPin) 20
著者Veesler, D, Dreier, B, Blangy, S, Lichiere, J, Tremblay, D, Moineau, S, Spinelli, S, Tegoni, M, Pluckthun, A, Campanacci, V, Cambillau, C.
登録日2009-05-13
公開日2009-09-08
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: comparison of DARPin and camelid VHH binding mode.
J.Biol.Chem., 284, 2009
6E71
DownloadVisualize
BU of 6e71 by Molmil
Structure of Human Transthyretin Val30Met/Thr119Met Mutant
分子名称: DI(HYDROXYETHYL)ETHER, Transthyretin
著者Saelices, L, Chung, K, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2018-07-25
公開日2019-07-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Variants of Transthyretin
To Be Published
6E78
DownloadVisualize
BU of 6e78 by Molmil
Structure of Human Transthyretin Asp38Ala Mutant in Complex with Diflunisal
分子名称: 5-(2,4-DIFLUOROPHENYL)-2-HYDROXY-BENZOIC ACID, Transthyretin
著者Chung, K, Saelices, L, Sawaya, M.R, Cascio, D, Eisenberg, D.
登録日2018-07-25
公開日2019-07-31
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献Structural Variants of Transthyretin
To Be Published
5KZN
DownloadVisualize
BU of 5kzn by Molmil
Metabotropic Glutamate Receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, MAGNESIUM ION, Metabotropic glutamate receptor 2
著者Chappell, M.D, Li, R, Smith, S.C, Dressman, B.A, Tromiczak, E.G, Tripp, A.E, Blanco, M.-J, Vetman, T, Quimby, S.J, Matt, J, Britton, T, Fivush, A.M, Schkeryantz, J.M, Mayhugh, D, Erickson, J.A, Bures, M, Jaramillo, C, Carpintero, M, de Diego, J.E, Barberis, M, Garcia-Cerrada, S, Soriano, J.F, Antonysamy, S, Atwell, S, MacEwan, I, Condon, B, Bradley, C, Wang, J, Zhang, A, Conners, K, Groshong, C, Wasserman, S.R, Koss, J.W, Witkin, J.M, Li, X, Overshiner, C, Wafford, K.A, Seidel, W, Wang, X.-S, Heinz, B.A, Swanson, S, Catlow, J, Bedwell, D, Monn, J.A, Mitch, C.H, Ornstein, P.
登録日2016-07-25
公開日2016-12-28
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discovery of (1S,2R,3S,4S,5R,6R)-2-Amino-3-[(3,4-difluorophenyl)sulfanylmethyl]-4-hydroxy-bicyclo[3.1.0]hexane-2,6-dicarboxylic Acid Hydrochloride (LY3020371HCl): A Potent, Metabotropic Glutamate 2/3 Receptor Antagonist with Antidepressant-Like Activity.
J. Med. Chem., 59, 2016
6EP7
DownloadVisualize
BU of 6ep7 by Molmil
ARABIDOPSIS THALIANA GSTU23, GSH bound
分子名称: GLUTATHIONE, GLYCEROL, Glutathione S-transferase U23, ...
著者Tossounian, M.A, Van Molle, I, Wahni, K, Jacques, S, Vertommen, D, Gevaert, K, Van Breusegem, F, Young, D, Rosado, L, Messens, J.
登録日2017-10-11
公開日2018-04-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.947 Å)
主引用文献Disulfide bond formation protects Arabidopsis thaliana glutathione transferase tau 23 from oxidative damage.
Biochim. Biophys. Acta, 1862, 2018
1HVX
DownloadVisualize
BU of 1hvx by Molmil
BACILLUS STEAROTHERMOPHILUS ALPHA-AMYLASE
分子名称: ALPHA-AMYLASE, CALCIUM ION, SODIUM ION
著者Suvd, D, Fujimoto, Z, Takase, K, Matsumura, M, Mizuno, H.
登録日2001-01-08
公開日2001-01-31
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of Bacillus stearothermophilus alpha-amylase: possible factors determining the thermostability.
J.Biochem., 129, 2001
1LIT
DownloadVisualize
BU of 1lit by Molmil
HUMAN LITHOSTATHINE
分子名称: LITHOSTATHINE
著者Bertrand, J.A, Pignol, D, Bernard, J.-P, Verdier, J.-M, Dagorn, J.-C, Fontacilla-Camps, J.C.
登録日1996-01-17
公開日1997-01-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Crystal structure of human lithostathine, the pancreatic inhibitor of stone formation.
EMBO J., 15, 1996
1PUL
DownloadVisualize
BU of 1pul by Molmil
Solution structure for the 21KDa caenorhabditis elegans protein CE32E8.3. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET WR33
分子名称: Hypothetical protein C32E8.3 in chromosome I
著者Tejero, R, Aramini, J.M, Swapna, G.V.T, Monleon, D, Chiang, Y, Macapagal, D, Gunsalus, K.C, Kim, S, Szyperski, T, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
登録日2003-06-25
公開日2005-06-21
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Backbone 1H, 15N and 13C assignments for the 21 kDa Caenorhabditis elegans homologue of "brain-specific" protein.
J.Biomol.Nmr, 28, 2004

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon