Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DZX
DownloadVisualize
BU of 7dzx by Molmil
Spike protein from SARS-CoV2 with Fab fragment of enhancing antibody 8D2
分子名称: Fab Heavy chain of enhancing antibody, Fab light chain of enhancing antibody, Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.53 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
7DZW
DownloadVisualize
BU of 7dzw by Molmil
Apo spike protein from SARS-CoV2
分子名称: Spike glycoprotein
著者Liu, Y, Soh, W.T, Li, S, Kishikawa, J, Hirose, M, Kato, T, Standley, D, Okada, M, Arase, H.
登録日2021-01-26
公開日2021-06-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献An infectivity-enhancing site on the SARS-CoV-2 spike protein targeted by antibodies.
Cell, 184, 2021
3KS4
DownloadVisualize
BU of 3ks4 by Molmil
Crystal structure of Reston ebolavirus VP35 RNA binding domain
分子名称: Polymerase cofactor VP35
著者Kimberlin, C.R, Bornholdt, Z.A, Li, S, Woods, V.L, Macrae, I.J, Saphire, E.O.
登録日2009-11-20
公開日2010-01-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression.
Proc.Natl.Acad.Sci.USA, 107, 2009
3VRL
DownloadVisualize
BU of 3vrl by Molmil
Crystal structure of BMJ4 p24 capsid protein in complex with A10F9 Fab
分子名称: A10F9 Fab heavy chain, A10F9 Fab light chain, Gag protein
著者Gu, Y, Cao, F, Li, S, Yuan, Y.A, Xia, N.
登録日2012-04-12
公開日2013-04-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of the HIV-1 capsid protein p24 in complex with the broad-spectrum antibody A10F9
To be Published
3KS8
DownloadVisualize
BU of 3ks8 by Molmil
Crystal structure of Reston ebolavirus VP35 RNA binding domain in complex with 18bp dsRNA
分子名称: 5'-R(*AP*GP*AP*AP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*A)-3', 5'-R(*UP*CP*CP*UP*CP*CP*CP*UP*CP*CP*CP*UP*CP*CP*UP*UP*CP*U)-3', Polymerase cofactor VP35
著者Kimberlin, C.R, Bornholdt, Z.A, Li, S, Woods, V.L, Macrae, I.J, Saphire, E.O.
登録日2009-11-20
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Ebolavirus VP35 uses a bimodal strategy to bind dsRNA for innate immune suppression.
Proc.Natl.Acad.Sci.USA, 107, 2009
7D77
DownloadVisualize
BU of 7d77 by Molmil
Cryo-EM structure of the cortisol-bound adhesion receptor GPR97-Go complex
分子名称: (11alpha,14beta)-11,17,21-trihydroxypregn-4-ene-3,20-dione, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
著者Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
登録日2020-10-03
公開日2021-02-03
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
7D76
DownloadVisualize
BU of 7d76 by Molmil
Cryo-EM structure of the beclomethasone-bound adhesion receptor GPR97-Go complex
分子名称: (8~{S},9~{R},10~{S},11~{S},13~{S},14~{S},16~{S},17~{R})-9-chloranyl-10,13,16-trimethyl-11,17-bis(oxidanyl)-17-(2-oxidanylethanoyl)-6,7,8,11,12,14,15,16-octahydrocyclopenta[a]phenanthren-3-one, Adhesion G protein-coupled receptor G3; GPR97, CHOLESTEROL, ...
著者Ping, Y, Mao, C, Xiao, P, Zhao, R, Jiang, Y, Yang, Z, An, W, Shen, D, Yang, F, Zhang, H, Qu, C, Shen, Q, Tian, C, Li, Z, Li, S, Wang, G, Tao, X, Wen, X, Zhong, Y, Yang, J, Yi, F, Yu, X, Xu, E, Zhang, Y, Sun, J.
登録日2020-10-03
公開日2021-02-03
最終更新日2021-02-10
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of the glucocorticoid-bound adhesion receptor GPR97-G o complex.
Nature, 589, 2021
2AXY
DownloadVisualize
BU of 2axy by Molmil
Crystal Structure of KH1 domain of human Poly(C)-binding protein-2 with C-rich strand of human telomeric DNA
分子名称: C-rich strand of human telomeric dna, Poly(rC)-binding protein 2
著者Du, Z, Lee, J.K, Tjhen, R.J, Li, S, Stroud, R.M, James, T.L.
登録日2005-09-06
公開日2005-09-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of the First KH Domain of Human Poly(C)-binding Protein-2 in Complex with a C-rich Strand of Human Telomeric DNA at 1.7 A
J.Biol.Chem., 280, 2005
2BVJ
DownloadVisualize
BU of 2bvj by Molmil
Ligand-free structure of cytochrome P450 PikC (CYP107L1)
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, BETA-MERCAPTOETHANOL, CYTOCHROME P450 MONOOXYGENASE, ...
著者Sherman, D.H, Li, S, Yermalitskaya, L.V, Kim, Y, Smith, J.A, Waterman, M.R, Podust, L.M.
登録日2005-06-28
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae.
J.Biol.Chem., 281, 2006
2C6H
DownloadVisualize
BU of 2c6h by Molmil
Crystal structure of YC-17-bound cytochrome P450 PikC (CYP107L1)
分子名称: 4-{[4-(DIMETHYLAMINO)-3-HYDROXY-6-METHYLTETRAHYDRO-2H-PYRAN-2-YL]OXY}-12-ETHYL-3,5,7,11-TETRAMETHYLOXACYCLODODEC-9-ENE-2,8-DIONE, CYTOCHROME P450 MONOOXYGENASE, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Sherman, D.H, Li, S, Yermalitskaya, L.V, Kim, Y, Smith, J.A, Waterman, M.R, Podust, L.M.
登録日2005-11-09
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae.
J.Biol.Chem., 281, 2006
2C7X
DownloadVisualize
BU of 2c7x by Molmil
Crystal structure of narbomycin-bound cytochrome P450 PikC (CYP107L1)
分子名称: CYTOCHROME P450 MONOOXYGENASE, NARBOMYCIN, PROTOPORPHYRIN IX CONTAINING FE
著者Sherman, D.H, Li, S, Yermalitskaya, L.V, Kim, Y, Smith, J.A, Waterman, M.R, Podust, L.M.
登録日2005-11-29
公開日2006-07-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Structural Basis for Substrate Anchoring, Active Site Selectivity, and Product Formation by P450 Pikc from Streptomyces Venezuelae.
J.Biol.Chem., 281, 2006
7WLU
DownloadVisualize
BU of 7wlu by Molmil
The Flattened Structure of mPIEZO1 in Lipid Bilayer
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, Piezo-type mechanosensitive ion channel component 1
著者Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
登録日2022-01-13
公開日2022-04-13
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (6.81 Å)
主引用文献Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7WLT
DownloadVisualize
BU of 7wlt by Molmil
the Curved Structure of mPIEZO1 in Lipid Bilayer
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine, ...
著者Yang, X, Lin, C, Chen, X, Li, S, Li, X, Xiao, B.
登録日2022-01-13
公開日2022-04-13
最終更新日2022-07-06
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structure deformation and curvature sensing of PIEZO1 in lipid membranes.
Nature, 604, 2022
7XFS
DownloadVisualize
BU of 7xfs by Molmil
MucP PDZ1 domain
分子名称: Putative zinc metalloprotease PA3649
著者Lou, X, Li, S, Zhang, Q, Bartlam, M.
登録日2022-04-02
公開日2023-04-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献MucP PDZ1 domain
To Be Published
7XFT
DownloadVisualize
BU of 7xft by Molmil
MucP PDZ2 domain
分子名称: Putative zinc metalloprotease PA3649, SODIUM ION, VALINE
著者Lou, X, Li, S, Zhang, Q, Bartlam, M.
登録日2022-04-02
公開日2023-04-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献MucP PDZ2 domain
To Be Published
7XFU
DownloadVisualize
BU of 7xfu by Molmil
MucP PDZ2 domain with peptide GPAVLA
分子名称: Putative zinc metalloprotease PA3649,peptide GPAVLA
著者Lou, X, Li, S, Zhang, Q, Bartlam, M.
登録日2022-04-02
公開日2023-04-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献MucP PDZ2 domain with peptide GPAVLA
To Be Published
7X3Y
DownloadVisualize
BU of 7x3y by Molmil
Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (CVB1-E:9A3)
分子名称: 9A3 heavy chain, 9A3 light chain, VP2, ...
著者Zheng, Q, Zhu, R, Sun, H, Cheng, T, Li, S, Xia, N.
登録日2022-03-01
公開日2023-06-07
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Cryo-EM structure of Coxsackievirus B1 empty particle in complex with nAb 9A3 (CVB1-E:9A3)
To Be Published
7YP2
DownloadVisualize
BU of 7yp2 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)
分子名称: 6H2 heavy chain, 6H2 light chain, Envelope glycoprotein H
著者Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
登録日2022-08-02
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YP1
DownloadVisualize
BU of 7yp1 by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
分子名称: 10E4 heavy chain, 10E4 light chain, EBV gH, ...
著者Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
登録日2022-08-02
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
7YOY
DownloadVisualize
BU of 7yoy by Molmil
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
分子名称: 3E8 heavy chain, 3E8 light chain, 5E3 heavy chain, ...
著者Liu, L, Sun, H, Jiang, Y, Hong, J, Zheng, Q, Li, S, Chen, Y, Xia, N.
登録日2022-08-02
公開日2024-01-31
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Non-overlapping epitopes on the gHgL-gp42 complex for the rational design of a triple-antibody cocktail against EBV infection.
Cell Rep Med, 4, 2023
4HOX
DownloadVisualize
BU of 4hox by Molmil
The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5 in complex with Tris
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ...
著者Xu, Z, Li, S, Xu, H, Zhou, J.
登録日2012-10-23
公開日2013-11-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of isomaltulose synthase from Erwinia rhapontici NX5 in complex with Tris
to be published
4HP5
DownloadVisualize
BU of 4hp5 by Molmil
The crystal structure of isomaltulose synthase mutant E295A from Erwinia rhapontici NX5 in complex with D-glucose
分子名称: CALCIUM ION, GLYCEROL, Sucrose isomerase, ...
著者Xu, Z, Li, S, Xu, H, Zhou, J.
登録日2012-10-23
公開日2013-11-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of isomaltulose synthase mutant E295A from Erwinia rhapontici NX5 in complex with D-glucose
to be published
4NSC
DownloadVisualize
BU of 4nsc by Molmil
Crystal Structure of CBARA1 in the Apo-form
分子名称: Calcium uptake protein 1, mitochondrial
著者Wang, L, Yang, X, Li, S, Shen, Y.
登録日2013-11-28
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and mechanistic insights into MICU1 regulation of mitochondrial calcium uptake.
Embo J., 33, 2014
4NSD
DownloadVisualize
BU of 4nsd by Molmil
Crystal Structure of CBARA1 in the Ca2+ Binding Form
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Wang, L, Yang, X, Li, S, Shen, Y.
登録日2013-11-28
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and mechanistic insights into MICU1 regulation of mitochondrial calcium uptake.
Embo J., 33, 2014
4O9B
DownloadVisualize
BU of 4o9b by Molmil
The Structure of CC1-IH in human STIM1.
分子名称: CADMIUM ION, Stromal interaction molecule 1
著者Cui, B, Yang, X, Li, S, Shen, Y.
登録日2014-01-02
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.604 Å)
主引用文献The inhibitory helix controls the intramolecular conformational switching of the C-terminus of STIM1.
Plos One, 8, 2013

220760

件を2024-06-05に公開中

PDB statisticsPDBj update infoContact PDBjnumon