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6LMV
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BU of 6lmv by Molmil
Cryo-EM structure of the C. elegans CLHM-1
分子名称: Calcium homeostasis modulator protein
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LMW
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BU of 6lmw by Molmil
Cryo-EM structure of the CALHM chimeric construct (8-mer)
分子名称: Calcium homeostasis modulator 1,Calcium homeostasis modulator protein 2
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LMT
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BU of 6lmt by Molmil
Cryo-EM structure of the killifish CALHM1
分子名称: CHOLESTEROL HEMISUCCINATE, Calcium homeostasis modulator 1
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6MR4
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BU of 6mr4 by Molmil
Crystal structure of the Sth1 bromodomain from S.cerevisiae
分子名称: Nuclear protein STH1/NPS1
著者Seo, H.S, Hashimoto, H, Krolak, A, Debler, E.W, Blus, B.J.
登録日2018-10-11
公開日2019-07-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Substrate Affinity and Specificity of the ScSth1p Bromodomain Are Fine-Tuned for Versatile Histone Recognition.
Structure, 27, 2019
1IWJ
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BU of 1iwj by Molmil
Putidaredoxin-Binding Stablilizes an Active Conformer of Cytochrome P450cam in its Reduced State; Crystal Structure of Mutant(109K) Cytochrome P450cam
分子名称: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE
著者Nagano, S, Shimada, H, Tarumi, A, Hishiki, T, Kimata-Ariga, Y, Egawa, T, Park, S.-Y, Adachi, S, Shiro, Y, Ishimura, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-05-15
公開日2002-06-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Infrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam
Biochemistry, 42, 2003
5EYO
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BU of 5eyo by Molmil
The crystal structure of the Max bHLH domain in complex with 5-carboxyl cytosine DNA
分子名称: DNA (5'-D(*AP*GP*TP*AP*GP*CP*AP*(1CC)P*GP*TP*GP*CP*TP*AP*CP*T)-3'), Protein max
著者Wang, D, Hashimoto, H, Zhang, X, Cheng, X.
登録日2015-11-25
公開日2016-12-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献MAX is an epigenetic sensor of 5-carboxylcytosine and is altered in multiple myeloma.
Nucleic Acids Res., 45, 2017
5XPT
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BU of 5xpt by Molmil
Crystal structure of MAD2L2/REV7 in complex with a CAMP fragment in a tetragonal crystal
分子名称: Chromosome alignment-maintaining phosphoprotein 1, Mitotic spindle assembly checkpoint protein MAD2B
著者Hara, K, Taharazako, S, Hashimoto, H.
登録日2017-06-05
公開日2017-09-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).
J. Biol. Chem., 292, 2017
7V94
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BU of 7v94 by Molmil
Cryo-EM structure of the Cas12c2-sgRNA-target DNA ternary complex
分子名称: Cas12c2, sgRNA, target DNA (non target strand), ...
著者Kurihara, N, Hirano, H, Tomita, A, Kobayashi, K, Kusakizako, T, Nishizawa, T, Yamashita, K, Nishimasu, H, Nureki, O.
登録日2021-08-24
公開日2022-04-13
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure of the type V-C CRISPR-Cas effector enzyme.
Mol.Cell, 82, 2022
7V93
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BU of 7v93 by Molmil
Cryo-EM structure of the Cas12c2-sgRNA binary complex
分子名称: cas12c2, sgRNA
著者Kurihara, N, Hirano, H, Tomita, A, Kobayashi, K, Kusakizako, T, Nishizawa, T, Yamashita, K, Nishimasu, H, Nureki, O.
登録日2021-08-24
公開日2022-04-13
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structure of the type V-C CRISPR-Cas effector enzyme.
Mol.Cell, 82, 2022
2EK4
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BU of 2ek4 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L8M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Shimada, H, Taketa, M, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L8M)
To be Published
2EK3
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BU of 2ek3 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L3M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Shimada, H, Taketa, M, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-22
公開日2007-09-25
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L3M)
To be Published
2EL3
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BU of 2el3 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L242M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, diphthine synthase
著者Asada, Y, Matsuura, Y, Ono, N, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-26
公開日2007-10-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L242M)
To be Published
5XPU
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BU of 5xpu by Molmil
Crystal structure of MAD2L2/REV7 in complex with a CAMP fragment in a monoclinic crystal
分子名称: Chromosome alignment-maintaining phosphoprotein 1, Mitotic spindle assembly checkpoint protein MAD2B
著者Hara, K, Taharazako, S, Hashimoto, H.
登録日2017-06-05
公開日2017-09-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Dynamic feature of mitotic arrest deficient 2-like protein 2 (MAD2L2) and structural basis for its interaction with chromosome alignment-maintaining phosphoprotein (CAMP).
J. Biol. Chem., 292, 2017
7DEN
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BU of 7den by Molmil
Crystal structure of P.aeruginosa LpxC in complex with inhibitor
分子名称: 4-[(1~{R},5~{S})-6-[2-[4-[3-[[2-[(1~{S})-1-oxidanylethyl]imidazol-1-yl]methyl]-1,2-oxazol-5-yl]phenyl]ethynyl]-3-azabicyclo[3.1.0]hexan-3-yl]butanoic acid, UDP-3-O-acyl-N-acetylglucosamine deacetylase, ZINC ION
著者Mima, M, Ushiyama, F, Takashima, H.
登録日2020-11-04
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Lead optimization of 2-hydroxymethyl imidazoles as non-hydroxamate LpxC inhibitors: Discovery of TP0586532.
Bioorg.Med.Chem., 30, 2020
2EL0
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BU of 2el0 by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L21M)
分子名称: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
著者Asada, Y, Matsuura, Y, Ono, N, Shimada, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-03-26
公開日2007-10-02
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (L21M)
To be Published
2E8Q
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BU of 2e8q by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (K19M)
分子名称: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE
著者Asada, Y, Shimada, H, Taketa, M, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-23
公開日2007-07-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3 (K19M)
To be Published
6KAW
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BU of 6kaw by Molmil
Crystal structure of CghA
分子名称: CghA
著者Hara, K, Hashimoto, H, Yokoyama, M, Sato, M, Watanabe, K.
登録日2019-06-24
公開日2020-06-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase
Nat Catal, 2021
7W86
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BU of 7w86 by Molmil
Crystal structure of the DYW domain of DYW1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
著者Sawada, Y, Shimizu, H, Toma-Fukai, S, Shimizu, T.
登録日2021-12-07
公開日2022-12-14
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insight into the activation of an Arabidopsis organellar C-to-U RNA editing enzyme by active site complementation.
Plant Cell, 35, 2023
2E8S
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BU of 2e8s by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
分子名称: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
著者Asada, Y, Shimada, H, Taketa, M, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-23
公開日2007-07-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
To be Published
2E8R
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BU of 2e8r by Molmil
Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
分子名称: Probable diphthine synthase, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION
著者Asada, Y, Taketa, M, Shimada, H, Matsuura, Y, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-01-23
公開日2007-07-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural study of Project ID PH0725 from Pyrococcus horikoshii OT3
To be Published
1FLY
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BU of 1fly by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.833 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLQ
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BU of 1flq by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLU
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BU of 1flu by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.785 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FN5
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BU of 1fn5 by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-21
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000
1FLW
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BU of 1flw by Molmil
HEN EGG WHITE LYSOZYME MUTANT WITH ALANINE SUBSTITUTED FOR GLYCINE
分子名称: LYSOZYME
著者Masumoto, K, Ueda, T, Motoshima, H, Imoto, T.
登録日2000-08-15
公開日2000-09-06
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.812 Å)
主引用文献Relationship between local structure and stability in hen egg white lysozyme mutant with alanine substituted for glycine
Protein Eng., 13, 2000

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