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5MMO
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BU of 5mmo by Molmil
E. coli DNA Gyrase B 24 kDa ATPase domain in complex with [3-(3-ethyl-ureido)-5-(pyridin-4-yl)-isoquinolin-8-yl-methyl]-carbamic acid prop-2-ynyl ester
分子名称: DNA gyrase subunit B, PHOSPHATE ION, prop-2-ynyl ~{N}-[[3-(ethylcarbamoylamino)-5-pyridin-4-yl-isoquinolin-8-yl]methyl]carbamate
著者Panchaud, P, Bruyere, T, Blumstein, A.-C, Bur, D, Chambovey, A, Ertel, E.A, Gude, M, Hubschwerlen, C, Jacob, L, Kimmerlin, T, Pfeifer, T, Prade, L, Seiler, P, Ritz, D, Rueedi, G.
登録日2016-12-12
公開日2017-04-26
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Discovery and Optimization of Isoquinoline Ethyl Ureas as Antibacterial Agents.
J. Med. Chem., 60, 2017
9FLM
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BU of 9flm by Molmil
Crystal structure of the C-terminal domain of VldE from Streptococcus pneumoniae in a catalytically competent conformation
分子名称: LysM domain-containing protein, ZINC ION
著者Miguel-Ruano, V, Acebron, I, P.de Jose, U, Straume, D, Havarstein, L.S, Hermoso, J.A.
登録日2024-06-05
公開日2025-01-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Characterization of VldE (Spr1875), a Pneumococcal Two-State l,d-Endopeptidase with a Four-Zinc Cluster in the Active Site.
Acs Catalysis, 14, 2024
7CR4
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BU of 7cr4 by Molmil
human KCNQ2-CaM in complex with ztz240
分子名称: Calmodulin-3, N-(6-chloranylpyridin-3-yl)-4-fluoranyl-benzamide, Potassium voltage-gated channel subfamily KQT member 2
著者Li, X, Lv, D, Wang, J, Ye, S, Guo, J.
登録日2020-08-12
公開日2020-09-16
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Molecular basis for ligand activation of the human KCNQ2 channel.
Cell Res., 31, 2021
7CRB
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BU of 7crb by Molmil
Cryo-EM structure of plant NLR RPP1 LRR-ID domain in complex with ATR1
分子名称: Avirulence protein ATR1, NAD+ hydrolase (NADase)
著者Ma, S.C, Lapin, D, Liu, L, Sun, Y, Song, W, Zhang, X.X, Logemann, E, Yu, D.L, Wang, J, Jirschitzka, J, Han, Z.F, SchulzeLefert, P, Parker, J.E, Chai, J.J.
登録日2020-08-13
公開日2020-12-16
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Direct pathogen-induced assembly of an NLR immune receptor complex to form a holoenzyme.
Science, 370, 2020
9FLN
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Crystal structure of the C-terminal domain of VldE H373A from Streptococcus pneumoniae
分子名称: LysM domain-containing protein, ZINC ION
著者Miguel-Ruano, V, Acebron, I, P.de Jose, U, Straume, D, Havarstein, L.S, Hermoso, J.A.
登録日2024-06-05
公開日2025-01-22
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Characterization of VldE (Spr1875), a Pneumococcal Two-State l,d-Endopeptidase with a Four-Zinc Cluster in the Active Site.
Acs Catalysis, 14, 2024
5LOQ
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BU of 5loq by Molmil
Structure of coproheme bound HemQ from Listeria monocytogenes
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,3,5,8-TETRAMETHYL-PORPHINE-2,4,6,7-TETRAPROPIONIC ACID FERROUS COMPLEX, Putative heme-dependent peroxidase lmo2113, ...
著者Puehringer, D, Mlynek, G, Hofbauer, S, Djinovic-Carugo, K, Obinger, C.
登録日2016-08-09
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Hydrogen peroxide-mediated conversion of coproheme to heme b by HemQ-lessons from the first crystal structure and kinetic studies.
FEBS J., 283, 2016
9J1M
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BU of 9j1m by Molmil
KU13-bond Mycobacterium tuberculosis 70S ribosome
分子名称: (2~{R},3~{R},4~{R},5~{R},8~{R},10~{R},11~{R},12~{S},13~{S},14~{R})-11-[(2~{S},3~{R},4~{S},6~{R})-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-2-ethyl-4-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-3,4-bis(oxidanyl)-5-[[4-(4-pyridin-4-yl-1,2,3-triazol-1-yl)phenyl]methoxy]oxan-2-yl]oxy-13-[(2~{R},4~{R},5~{S},6~{S})-4-methoxy-4,6-dimethyl-5-oxidanyl-oxan-2-yl]oxy-3,5,6,8,10,12,14-heptamethyl-3,10-bis(oxidanyl)-1-oxa-6-azacyclopentadecan-15-one, 16S rRNA, 23S rRNA, ...
著者Nishihara, D, Fujino, M, Tanaka, Y, Yokoyama, T.
登録日2024-08-05
公開日2025-03-19
実験手法ELECTRON MICROSCOPY (2.33 Å)
主引用文献Creation of a macrolide antibiotic against non-tuberculous Mycobacterium using late-stage boron-mediated aglycon delivery.
Sci Adv, 11, 2025
6TUA
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BU of 6tua by Molmil
The RYK Pseudokinase Domain
分子名称: SULFATE ION, Tyrosine-protein kinase RYK
著者Mathea, S, Chatterjee, D, Preuss, F, Shin, D, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S.
登録日2020-01-04
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural Insights into Pseudokinase Domains of Receptor Tyrosine Kinases.
Mol.Cell, 79, 2020
7UEL
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BU of 7uel by Molmil
Genetic and structural basis for the human anti-alpha-galactosyl antibody response
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, Heavy chain Fab of antibody JEC1, ...
著者Langley, D.B, Christ, D.
登録日2022-03-22
公開日2022-06-29
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Genetic and structural basis of the human anti-alpha-galactosyl antibody response.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UEM
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BU of 7uem by Molmil
Genomic and structural basis for the human anti-alpha-galactosyl antibody response
分子名称: CHLORIDE ION, Heavy chain Fab arm of antibody HKB7, Light chain Fab of antibody HKB7, ...
著者Langley, D.B, Christ, D.
登録日2022-03-22
公開日2022-06-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.314 Å)
主引用文献Genetic and structural basis of the human anti-alpha-galactosyl antibody response.
Proc.Natl.Acad.Sci.USA, 119, 2022
7U0L
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BU of 7u0l by Molmil
Crystal structure of the CCoV-HuPn-2018 RBD (domain B) in complex with canine APN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
著者Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-02-18
公開日2022-08-24
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022
7UEN
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BU of 7uen by Molmil
Genetic and structural basis of the human anti-alpha-galactosyl antibody response
分子名称: M86 antibody Fab heavy chain, M86 antibody Fab light chain, PHOSPHATE ION, ...
著者Langley, D.B, Christ, D.
登録日2022-03-22
公開日2022-06-29
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Genetic and structural basis of the human anti-alpha-galactosyl antibody response.
Proc.Natl.Acad.Sci.USA, 119, 2022
7US9
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BU of 7us9 by Molmil
CCoV-HuPn-2018 S in the proximal conformation (local refinement of domain 0)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-04-23
公開日2022-08-24
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022
7US6
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BU of 7us6 by Molmil
Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the proximal conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-04-23
公開日2022-08-24
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022
7USB
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BU of 7usb by Molmil
CCoV-HuPn-2018 S in the swung out conformation (local refinement of domain 0)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-04-23
公開日2022-08-24
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022
9IN8
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BU of 9in8 by Molmil
True-atomic resolution crystal structure of the open state of the viral channelrhodopsin OLPVR1
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, EICOSANE, ...
著者Bukhdruker, S, Zabelskii, D, Astashkin, R, Bourenkov, G, Gordeliy, V.
登録日2024-07-05
公開日2025-03-12
最終更新日2025-04-23
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Ion-conducting and gating molecular mechanisms of channelrhodopsin revealed by true-atomic-resolution structures of open and closed states.
Nat.Struct.Mol.Biol., 2025
1UPU
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BU of 1upu by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V, BOUND TO PRODUCT URIDINE-1-MONOPHOSPHATE (UMP)
分子名称: PHOSPHATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE
著者Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
登録日1998-04-16
公開日1999-05-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
9IN9
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Structure of the viral channelrhodopsin OLPVR1 at low pH obtained by soaking
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, EICOSANE, ...
著者Bukhdruker, S, Zabelskii, D, Astashkin, R, Gordeliy, V.
登録日2024-07-05
公開日2025-03-12
最終更新日2025-04-23
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Ion-conducting and gating molecular mechanisms of channelrhodopsin revealed by true-atomic-resolution structures of open and closed states.
Nat.Struct.Mol.Biol., 2025
9IN7
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BU of 9in7 by Molmil
True-atomic resolution crystal structure of the closed state of the viral channelrhodopsin OLPVR1
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-hexadec-9-enoate, EICOSANE, ...
著者Bukhdruker, S, Zabelskii, D, Astashkin, R, Gordeliy, V.
登録日2024-07-05
公開日2025-03-12
最終更新日2025-04-23
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Ion-conducting and gating molecular mechanisms of channelrhodopsin revealed by true-atomic-resolution structures of open and closed states.
Nat.Struct.Mol.Biol., 2025
7USF
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BU of 7usf by Molmil
Mouse mammary tumor virus strand transfer complex intasome
分子名称: CALCIUM ION, Integrase, ZINC ION, ...
著者Jozwik, I, Lyumkis, D.
登録日2022-04-25
公開日2022-08-24
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献B-to-A transition in target DNA during retroviral integration.
Nucleic Acids Res., 50, 2022
7LXW
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BU of 7lxw by Molmil
SARS-CoV-2 S/S2M11/S2X333 Local Refinement
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, S2X333 Fab Heavy Chain variable region, S2X333 Fab Light Chain variable region, ...
著者McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2021-03-05
公開日2021-04-14
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献N-terminal domain antigenic mapping reveals a site of vulnerability for SARS-CoV-2.
Cell, 184, 2021
7USA
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BU of 7usa by Molmil
Structure of the human coronavirus CCoV-HuPn-2018 spike glycoprotein with domain 0 in the swung out conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Tortorici, M.A, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2022-04-23
公開日2022-08-24
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structure, receptor recognition, and antigenicity of the human coronavirus CCoV-HuPn-2018 spike glycoprotein.
Cell, 185, 2022
7LY0
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BU of 7ly0 by Molmil
SARS-CoV-2 S/S2M11/S2M28 Local Refinement
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, S2M28 Fab Heavy Chain variable region, S2M28 Fab Light Chain variable region, ...
著者McCallum, M, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2021-03-05
公開日2021-04-14
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献N-terminal domain antigenic mapping reveals a site of vulnerability for SARS-CoV-2.
Cell, 184, 2021
9C6O
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BU of 9c6o by Molmil
Merbecovirus MOW15-22 Spike glycoprotein RBD bound to the P. davyi ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MOW15-22 RBD, ...
著者Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2024-06-07
公開日2025-03-05
最終更新日2025-04-02
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Multiple independent acquisitions of ACE2 usage in MERS-related coronaviruses.
Cell, 188, 2025
6FJS
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BU of 6fjs by Molmil
Proteinase~K SIRAS phased structure of room-temperature, serially collected synchrotron data
分子名称: CALCIUM ION, Proteinase K
著者Botha, S, Baitan, D, Jungnickel, K.E.J, Oberthuer, D, Schmidt, C, Stern, S, Wiedorn, M.O, Perbandt, M, Chapman, H.N, Betzel, C.
登録日2018-01-23
公開日2018-10-10
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献De novoprotein structure determination by heavy-atom soaking in lipidic cubic phase and SIRAS phasing using serial synchrotron crystallography.
IUCrJ, 5, 2018

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