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5LWP
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BU of 5lwp by Molmil
Discovery of phenoxyindazoles and phenylthioindazoles as RORg inverse agonists
分子名称: 4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid, Nuclear receptor ROR-gamma
著者Ouvry, G, Bouix-Peter, C, Ciesielski, F, Chantalat, L, Christin, O, Comino, C, Duvert, D, Feret, C, Harris, C.S, Luzy, A.-P, Musicki, B, Orfila, D, Pascau, J, Parnet, V, Perrin, A, Pierre, R, Raffin, C, Rival, Y, Taquet, N, Thoreau, E, Hennequin, L.F.
登録日2016-09-19
公開日2016-11-16
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Discovery of phenoxyindazoles and phenylthioindazoles as ROR gamma inverse agonists.
Bioorg.Med.Chem.Lett., 26, 2016
5W7H
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BU of 5w7h by Molmil
Supercharged arPTE variant R5
分子名称: Phosphotriesterase, ZINC ION
著者Campbell, E, Grant, J, Wang, Y, Sandhu, M, Williams, R.J, Nisbet, D.R, Perriman, A, Lupton, D, Jackson, C.J.
登録日2017-06-19
公開日2019-01-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Hydrogel-Immobilized Supercharged Proteins
Adv Biosyst, 2018
5LSW
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BU of 5lsw by Molmil
A CAF40-binding motif facilitates recruitment of the CCR4-NOT complex to mRNAs targeted by Drosophila Roquin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Cell differentiation protein RCD1 homolog, LD12033p, ...
著者Sgromo, A, Raisch, T, Bawankar, P, Bhandari, D, Chen, Y, Kuzuoglu-Ozturk, D, Weichenrieder, O, Izaurralde, E.
登録日2016-09-05
公開日2017-02-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A CAF40-binding motif facilitates recruitment of the CCR4-NOT complex to mRNAs targeted by Drosophila Roquin.
Nat Commun, 8, 2017
6K7T
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Crystal structure of bat (Pteropus Alecto) MHC class I Ptal-N*01:01 in complex with Hendra virus-derived peptide HeV1--human beta-2 microglobulin
分子名称: Beta-2-microglobulin, HeV1, MHC class I antigen
著者Lu, D, Liu, K.F, Zhang, D, Yue, C, Lu, Q, Cheng, H, Chai, Y, Qi, J.X, Gao, F.G, Liu, W.J.
登録日2019-06-08
公開日2019-11-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Peptide presentation by bat MHC class I provides new insight into the antiviral immunity of bats.
Plos Biol., 17, 2019
6SNE
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BU of 6sne by Molmil
crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, LN01 heavy chain, ...
著者Caillat, C, Pinto, D, Corti, D, Fenwick, C, Pantaleo, G, Weissenhorn, W.
登録日2019-08-23
公開日2019-11-06
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献Structural Basis for Broad HIV-1 Neutralization by the MPER-Specific Human Broadly Neutralizing Antibody LN01.
Cell Host Microbe, 26, 2019
7B03
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BU of 7b03 by Molmil
Cryo-EM structure of the green-light absorbing proteorhodopsin
分子名称: Proteorhodopsin, RETINAL
著者Hirschi, S, Kalbermatter, D, Fotiadis, D.
登録日2020-11-18
公開日2021-06-16
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Cryo-EM structure and dynamics of the green-light absorbing proteorhodopsin
Nature Communications, 12, 2021
1QQ9
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STREPTOMYCES GRISEUS AMINOPEPTIDASE COMPLEXED WITH METHIONINE
分子名称: AMINOPEPTIDASE, CALCIUM ION, METHIONINE, ...
著者Gilboa, R, Greenblatt, H.M, Perach, M, Spungin-Bialik, A, Lessel, U, Schomburg, D, Blumberg, S, Shoham, G.
登録日1999-06-12
公開日2000-05-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Interactions of Streptomyces griseus aminopeptidase with a methionine product analogue: a structural study at 1.53 A resolution.
Acta Crystallogr.,Sect.D, 56, 2000
9J1R
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Structure of a triple-helix region of human Collagen type II from Trautec
分子名称: SULFATE ION, Triple-helix region of human collagen type II
著者Fan, X, Chu, Y, Zhai, Y, Fu, S, Li, D, Cao, K, Feng, P, Wang, X, Le, H, Tang, D, Zhang, F, Qian, S.
登録日2024-08-05
公開日2024-08-21
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structure of a triple-helix region of human Collagen type II from Trautec
To Be Published
5IA2
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BU of 5ia2 by Molmil
Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with compound 66
分子名称: 1,2-ETHANEDIOL, 7-(5-hydroxy-2-methylphenyl)-8-(2-methoxyphenyl)-1-methyl-1H-imidazo[2,1-f]purine-2,4(3H,8H)-dione, Ephrin type-A receptor 2
著者Kudlinzki, D, Linhard, V.L, Gande, S.L, Sreeramulu, S, Saxena, K, Heinzlmeir, S, Medard, G, Kuester, B, Schwalbe, H.
登録日2016-02-21
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.619 Å)
主引用文献Chemical Proteomics and Structural Biology Define EPHA2 Inhibition by Clinical Kinase Drugs.
ACS Chem. Biol., 11, 2016
6I0O
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Structure of human IMP dehydrogenase, isoform 2, bound to GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, Inosine-5'-monophosphate dehydrogenase 2, SULFATE ION
著者Buey, R.M, Fernandez-Justel, D, Revuelta, J.L.
登録日2018-10-26
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.623 Å)
主引用文献A Nucleotide-Dependent Conformational Switch Controls the Polymerization of Human IMP Dehydrogenases to Modulate their Catalytic Activity.
J. Mol. Biol., 431, 2019
6I0M
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Structure of human IMP dehydrogenase, isoform 2, bound to GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-MONOPHOSPHATE, Inosine-5'-monophosphate dehydrogenase 2, ...
著者Buey, R.M, Fernandez-Justel, D, Revuelta, J.L.
登録日2018-10-26
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.567 Å)
主引用文献A Nucleotide-Dependent Conformational Switch Controls the Polymerization of Human IMP Dehydrogenases to Modulate their Catalytic Activity.
J. Mol. Biol., 431, 2019
9FUY
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MsbA in UDM inward-facing wide open
分子名称: ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
9FUS
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MsbA in LMNG inward-facing wide open
分子名称: ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
6HUP
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CryoEM structure of human full-length alpha1beta3gamma2L GABA(A)R in complex with diazepam (Valium), GABA and megabody Mb38.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-CHLORO-1-METHYL-5-PHENYL-1,3-DIHYDRO-2H-1,4-BENZODIAZEPIN-2-ONE, GAMMA-AMINO-BUTANOIC ACID, ...
著者Masiulis, S, Desai, R, Uchanski, T, Serna Martin, I, Laverty, D, Karia, D, Malinauskas, T, Jasenko, Z, Pardon, E, Kotecha, A, Steyaert, J, Miller, K.W, Aricescu, A.R.
登録日2018-10-09
公開日2019-01-02
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献GABAAreceptor signalling mechanisms revealed by structural pharmacology.
Nature, 565, 2019
9FV6
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MsbA in Amphipol A8-35 inward-facing wide open
分子名称: ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
5X2V
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Crystal structure of Pseudomonas putida methionine gamma-lyase wild type without sulfate ion
分子名称: L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
9FV3
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MsbA in MSP2N2 Nanodisc inward-facing narrow open
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
9FUT
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MsbA in GDN inward-facing narrow
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
5X2Y
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Crystal structure of Pseudomonas putida methionine gamma-lyase C116H mutant without sulfate ion
分子名称: L-methionine gamma-lyase
著者Shiba, T, Sato, D, Harada, S.
登録日2017-02-02
公開日2017-04-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural and mechanistic insights into homocysteine degradation by a mutant of methionine gamma-lyase based on substrate-assisted catalysis
Protein Sci., 26, 2017
9FUV
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MsbA in Triton inward-facing wide open
分子名称: ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
9FUR
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MsbA in LMNG inward-facing narrow
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-5-[(2~{S},3~{S},4~{R},5~{R},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-4-[(2~{R},3~{S},4~{R},5~{S},6~{R})-6-[(1~{S})-2-[(2~{S},3~{S},4~{S},5~{S},6~{R})-6-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-1-oxidanyl-ethyl]-3,4-bis(oxidanyl)-5-phosphonooxy-oxan-2-yl]oxy-3-oxidanyl-5-phosphonooxy-oxan-2-yl]oxy-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
9FV9
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MsbA in Amphipol 18 inward-facing wide (+) open
分子名称: ATP-dependent lipid A-core flippase
著者Hoffmann, L, Baier, A, Jorde, L, Kamel, M, Schaefer, J, Schnelle, K, Scholz, A, Shvarev, D, Wong, J, Parey, K, Januliene, D, Moeller, A.
登録日2024-06-26
公開日2025-03-19
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献The ABC transporter MsbA in a dozen environments.
Structure, 33, 2025
1HK6
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Ral binding domain from Sec5
分子名称: EXOCYST COMPLEX COMPONENT SEC5
著者Mott, H.R, Nietlispach, D, Hopkins, L.J, Mirey, G, Camonis, J.H, Owen, D.
登録日2003-03-05
公開日2003-03-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the GTPase-binding domain of Sec5 and elucidation of its Ral binding site.
J. Biol. Chem., 278, 2003
8R7G
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Crystal structure of the kinase domain of ACVR1 (ALK2) with M4K2234
分子名称: 2-fluoranyl-6-methoxy-4-[4-methyl-5-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pyridin-3-yl]benzamide, Activin receptor type I
著者Williams, E.P, Cros, J, Ensan, D, Smil, D, Edwards, A.M, O'Meara, J.A, Fernandez-Cid, A, Isaac, M.B, Al-awar, R, Bullock, A.N.
登録日2023-11-24
公開日2024-04-03
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Targeting ALK2: An Open Science Approach to Developing Therapeutics for the Treatment of Diffuse Intrinsic Pontine Glioma.
J.Med.Chem., 63, 2020
8QZO
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Crystal structure of heterodimeric complex of CdpB1 and CdpB2 from A. fulgidus
分子名称: PRC-barrel domain-containing protein
著者Ciziene, D, Bellini, D, Lowe, J.
登録日2023-10-27
公開日2024-04-03
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Proteins containing photosynthetic reaction centre domains modulate FtsZ-based archaeal cell division.
Nat Microbiol, 9, 2024

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