Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7DNC
DownloadVisualize
BU of 7dnc by Molmil
Crystal structure of EV71 3C proteinase in complex with a novel inhibitor
分子名称: 3C protease, ~{N}-[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(2~{S})-1-oxidanylidene-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]propan-2-yl]-1~{H}-indole-2-carboxamide
著者Xie, H, Su, H.X, Li, M.J, Xu, Y.C.
登録日2020-12-09
公開日2021-05-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Design, Synthesis, and Biological Evaluation of Peptidomimetic Aldehydes as Broad-Spectrum Inhibitors against Enterovirus and SARS-CoV-2.
J.Med.Chem., 65, 2022
5YSW
DownloadVisualize
BU of 5ysw by Molmil
Crystal Structure Analysis of Rif16 in complex with R-L
分子名称: (2S,12E,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-21-(acetyloxy)-5,6,17,19-tetrahydroxy-23-methoxy-2,4,12,16,18,20,22-heptamethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-9-yl hydroxyacetate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Li, F.W, Qi, F.F, Xiao, Y.L, Zhao, G.P, Li, S.Y.
登録日2017-11-15
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Deciphering the late steps of rifamycin biosynthesis.
Nat Commun, 9, 2018
5YET
DownloadVisualize
BU of 5yet by Molmil
Structure of R354_WT
分子名称: Uncharacterized protein R354
著者Dou, C, Yu, M.J, Gu, Y.J, Cheng, W.
登録日2017-09-19
公開日2018-06-20
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.806 Å)
主引用文献Structural and Mechanistic Analyses Reveal a Unique Cas4-like Protein in the Mimivirus Virophage Resistance Element System.
Iscience, 3, 2018
5Y4Z
DownloadVisualize
BU of 5y4z by Molmil
Crystal structure of the Zika virus NS3 helicase complex with AMPPNP
分子名称: MANGANESE (II) ION, NS3 helicase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Li, L.
登録日2017-08-06
公開日2017-08-30
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural view of the helicase reveals that Zika virus uses a conserved mechanism for unwinding RNA
Acta Crystallogr.,Sect.F, 74, 2018
5YSM
DownloadVisualize
BU of 5ysm by Molmil
Crystal Structure Analysis of Rif16
分子名称: Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Li, F.W, Qi, F.F, Xiao, Y.L, Zhao, G.P, Li, S.Y.
登録日2017-11-14
公開日2018-07-04
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Deciphering the late steps of rifamycin biosynthesis.
Nat Commun, 9, 2018
5YT7
DownloadVisualize
BU of 5yt7 by Molmil
crystal structure of circularly permutated Azurin 3
分子名称: Azurin, CALCIUM ION, CHLORIDE ION, ...
著者Chen, H.H, Liu, H.P, Yu, Y.
登録日2017-11-17
公開日2018-08-08
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Engineering the Metal-binding Loop of a Blue Copper Protein by Circular Permutation
Rsc Adv, 2017
7F2O
DownloadVisualize
BU of 7f2o by Molmil
Cryo-EM structure of the type 2 bradykinin receptor in complex with the bradykinin and an Gq protein
分子名称: ARG-PRO-PRO-GLY-PHE-SER-PRO-PHE-ARG, B2 bradykinin receptor, G subunit q (Gi1-Gq chimeric), ...
著者Yin, Y, Jiang, Y.
登録日2021-06-11
公開日2021-10-13
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis for kinin selectivity and activation of the human bradykinin receptors.
Nat.Struct.Mol.Biol., 28, 2021
5WVF
DownloadVisualize
BU of 5wvf by Molmil
Crystal structure of a mutant insect group III chitinase (CAD2-E647L) from Ostrinia furnacalis
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Chitinase
著者Liu, T, Zhou, Y, Yang, Q.
登録日2016-12-24
公開日2017-12-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献The deduced role of a chitinase containing two nonsynergistic catalytic domains
Acta Crystallogr D Struct Biol, 74, 2018
1LMB
DownloadVisualize
BU of 1lmb by Molmil
REFINED 1.8 ANGSTROM CRYSTAL STRUCTURE OF THE LAMBDA REPRESSOR-OPERATOR COMPLEX
分子名称: DNA (5'-D(*AP*AP*TP*AP*CP*CP*AP*CP*TP*GP*GP*CP*GP*GP*TP*GP*A P*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*TP*CP*AP*CP*CP*GP*CP*CP*AP*GP*TP*GP*G P*TP*AP*T)-3'), PROTEIN (LAMBDA REPRESSOR)
著者Beamer, L.J, Pabo, C.O.
登録日1991-11-05
公開日1991-11-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Refined 1.8 A crystal structure of the lambda repressor-operator complex.
J.Mol.Biol., 227, 1992
1LRP
DownloadVisualize
BU of 1lrp by Molmil
COMPARISON OF THE STRUCTURES OF CRO AND LAMBDA REPRESSOR PROTEINS FROM BACTERIOPHAGE LAMBDA
分子名称: LAMBDA REPRESSOR
著者Pabo, C, Lewis, M.
登録日1987-12-04
公開日1989-01-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Comparison of the structures of cro and lambda repressor proteins from bacteriophage lambda.
J.Mol.Biol., 169, 1983
8JV5
DownloadVisualize
BU of 8jv5 by Molmil
Cryo-EM structure of the zebrafish P2X4 receptor in complex with BX430
分子名称: 1-[2,6-bis(bromanyl)-4-propan-2-yl-phenyl]-3-pyridin-3-yl-urea, 2-acetamido-2-deoxy-beta-D-glucopyranose, P2X purinoceptor
著者Hattori, M, Shen, C.
登録日2023-06-27
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.23 Å)
主引用文献Structural insights into the allosteric inhibition of P2X4 receptors.
Nat Commun, 14, 2023
8JV6
DownloadVisualize
BU of 8jv6 by Molmil
Cryo-EM structure of the zebrafish P2X4 receptor in complex with BAY-1797
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-[4-(3-chloranylphenoxy)-3-sulfamoyl-phenyl]-2-phenyl-ethanamide, P2X purinoceptor
著者Hattori, M, Shen, C.
登録日2023-06-27
公開日2023-10-18
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Structural insights into the allosteric inhibition of P2X4 receptors.
Nat Commun, 14, 2023
4AF3
DownloadVisualize
BU of 4af3 by Molmil
Human Aurora B Kinase in complex with INCENP and VX-680
分子名称: AURORA KINASE B, CYCLOPROPANECARBOXYLIC ACID {4-[4-(4-METHYL-PIPERAZIN-1-YL)-6-(5-METHYL-2H-PYRAZOL-3-YLAMINO)-PYRIMIDIN-2-YLSULFANYL]-PHENYL}-AMIDE, INNER CENTROMERE PROTEIN
著者Elkins, J.M, Vollmar, M, Wang, J, Picaud, S, Arrowsmith, C.H, Edwards, A, Bountra, C, von Delft, F, Knapp, S.
登録日2012-01-16
公開日2012-04-11
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal Structure of Human Aurora B in Complex with Incenp and Vx-680.
J.Med.Chem., 55, 2012
7Y6D
DownloadVisualize
BU of 7y6d by Molmil
Cryo-EM structure of SARS-CoV-2 Delta variant spike proteins on intact virions: 3 Closed RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Xu, J, Song, Y, Li, S.
登録日2022-06-20
公開日2023-06-07
実験手法ELECTRON MICROSCOPY (4.39 Å)
主引用文献In situ architecture and membrane fusion of SARS-CoV-2 Delta variant.
Proc.Natl.Acad.Sci.USA, 120, 2023
7E2V
DownloadVisualize
BU of 7e2v by Molmil
Crystal structure of MaDA-3
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, MaDA-3
著者Gao, L, Du, X, Fan, J, Lei, X.
登録日2021-02-07
公開日2021-12-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Enzymatic control of endo- and exo-stereoselective Diels-Alder reactions with broad substrate scope.
Nat Catal, 2021
7DV4
DownloadVisualize
BU of 7dv4 by Molmil
Crystal structure of anti-CTLA-4 VH domain in complex with human CTLA-4
分子名称: 1,2-ETHANEDIOL, 4003-1(VH), Cytotoxic T-lymphocyte protein 4
著者Li, H, Gan, X, He, Y.
登録日2021-01-12
公開日2022-01-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献An anti-CTLA-4 heavy chain-only antibody with enhanced T reg depletion shows excellent preclinical efficacy and safety profile.
Proc.Natl.Acad.Sci.USA, 119, 2022
7F65
DownloadVisualize
BU of 7f65 by Molmil
Bacetrial Cocaine Esterase with mutations T172R/G173Q/V116K/S117A/A51L, bound to benzoic acid
分子名称: BENZOIC ACID, Cocaine esterase, SULFATE ION
著者Ouyang, P.F, Zhang, Y, Tong, J.
登録日2021-06-24
公開日2021-09-15
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Computational Design and Crystal Structure of a Highly Efficient Benzoylecgonine Hydrolase.
Angew.Chem.Int.Ed.Engl., 60, 2021
7C2S
DownloadVisualize
BU of 7c2s by Molmil
Helical reconstruction of Dengue virus serotype 3 complexed with Fab C10
分子名称: Heavy chain of Fab C10, envelope protein, light chain of Fab C10
著者Morrone, S, Chew, S.V, Lim, X.N, Ng, T.S, Kostyuchenko, V.A, Zhang, S, Lok, S.M.
登録日2020-05-09
公開日2020-07-08
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (10.4 Å)
主引用文献High flavivirus structural plasticity demonstrated by a non-spherical morphological variant.
Nat Commun, 11, 2020
7C2T
DownloadVisualize
BU of 7c2t by Molmil
Helical reconstruction of Zika virus complexed with Fab C10
分子名称: Heavy chain from Fab C10, Light chain from Fab C10, M protein, ...
著者Morrone, S, Chew, S.V, Lim, X.N, Ng, T.S, Kostyuchenko, V.A, Zhang, S, Lok, S.M.
登録日2020-05-09
公開日2020-07-08
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (9.4 Å)
主引用文献High flavivirus structural plasticity demonstrated by a non-spherical morphological variant.
Nat Commun, 11, 2020
7WKS
DownloadVisualize
BU of 7wks by Molmil
Apo state of AtPIN3
分子名称: Auxin efflux carrier component 3
著者Su, N.
登録日2022-01-11
公開日2022-08-10
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures and mechanisms of the Arabidopsis auxin transporter PIN3.
Nature, 609, 2022
7WKW
DownloadVisualize
BU of 7wkw by Molmil
NPA bound state of AtPIN3
分子名称: 2-(naphthalen-1-ylcarbamoyl)benzoic acid, Auxin efflux carrier component 3
著者Su, N.
登録日2022-01-11
公開日2022-08-10
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Structures and mechanisms of the Arabidopsis auxin transporter PIN3.
Nature, 609, 2022
7X83
DownloadVisualize
BU of 7x83 by Molmil
Cryo-EM structure of the TMEM106B fibril from normal elder
分子名称: Transmembrane protein 106B
著者Xia, W.C, Zhao, Q.Y, Fan, Y, Sun, Y.P, Tao, Y.Q, Liu, C.
登録日2022-03-11
公開日2022-06-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Generic amyloid fibrillation of TMEM106B in patient with Parkinson's disease dementia and normal elders.
Cell Res., 32, 2022
7X84
DownloadVisualize
BU of 7x84 by Molmil
Cryo-EM structure of the TMEM106B fibril from Parkinson's disease dementia
分子名称: Transmembrane protein 106B
著者Zhao, Q.Y, Xia, W.C, Fan, Y, Sun, Y.P, Tao, Y.Q, Liu, C.
登録日2022-03-11
公開日2022-06-15
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Generic amyloid fibrillation of TMEM106B in patient with Parkinson's disease dementia and normal elders.
Cell Res., 32, 2022
5O2D
DownloadVisualize
BU of 5o2d by Molmil
PARP14 Macrodomain 2 with inhibitor
分子名称: Poly [ADP-ribose] polymerase 14, ~{N}-[2-(9~{H}-carbazol-1-yl)phenyl]methanesulfonamide
著者Uth, K, Schuller, M, Sieg, C, Wang, J, Krojer, T, Knapp, S, Riedels, K, Bracher, F, Edwards, A.M, Arrowsmith, C, Bountra, C, Elkins, J.M, Structural Genomics Consortium (SGC)
登録日2017-05-20
公開日2017-11-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Discovery of a Selective Allosteric Inhibitor Targeting Macrodomain 2 of Polyadenosine-Diphosphate-Ribose Polymerase 14.
ACS Chem. Biol., 12, 2017
7XXB
DownloadVisualize
BU of 7xxb by Molmil
IAA bound state of AtPIN3
分子名称: 1H-INDOL-3-YLACETIC ACID, Auxin efflux carrier component 3
著者Su, N.
登録日2022-05-29
公開日2022-08-10
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.93 Å)
主引用文献Structures and mechanisms of the Arabidopsis auxin transporter PIN3.
Nature, 609, 2022

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon