Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6UOE
DownloadVisualize
BU of 6uoe by Molmil
3-25 Fab germline-reversion variant bound to an HCMV gB-derived peptide
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-25 Fab heavy chain, 3-25 Fab light chain, ...
著者Wrapp, D, McLellan, J.S.
登録日2019-10-14
公開日2020-07-29
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Recognition of a highly conserved glycoprotein B epitope by a bivalent antibody neutralizing HCMV at a post-attachment step.
Plos Pathog., 16, 2020
6VC9
DownloadVisualize
BU of 6vc9 by Molmil
TB19 complex
分子名称: 1,2-ETHANEDIOL, 5'-nucleotidase, ecto (CD73), ...
著者Zhou, Y.F, Lord, D.M.
登録日2019-12-20
公開日2020-11-11
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A highly potent CD73 biparatopic antibody blocks organization of the enzyme active site through dual mechanisms.
J.Biol.Chem., 295, 2020
6VCA
DownloadVisualize
BU of 6vca by Molmil
TB38 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-nucleotidase, ...
著者Zhou, Y.F, Lord, D.M.
登録日2019-12-20
公開日2020-11-11
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (3.73 Å)
主引用文献A highly potent CD73 biparatopic antibody blocks organization of the enzyme active site through dual mechanisms.
J.Biol.Chem., 295, 2020
6WYV
DownloadVisualize
BU of 6wyv by Molmil
E. coli 50S ribosome bound to compounds 47 and VS1
分子名称: (3R,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-12-methyl-3-(propan-2-yl)-4-(prop-2-en-1-yl)-3,4,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,7H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,22-trione, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2020-05-13
公開日2020-06-17
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.75 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
6X3C
DownloadVisualize
BU of 6x3c by Molmil
Crystal structure of streptogramin A acetyltransferase VatA from Staphylococcus aureus in complex with streptogramin analog F1037 (47)
分子名称: (3R,4R,5E,10E,12E,14S,16R,26aR)-16-fluoro-14-hydroxy-12-methyl-3-(propan-2-yl)-4-(prop-2-en-1-yl)-3,4,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,7H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosine-1,7,22-trione, CHLORIDE ION, MAGNESIUM ION, ...
著者Chaires, H.A, Fraser, J.S.
登録日2020-05-21
公開日2020-11-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
2I0N
DownloadVisualize
BU of 2i0n by Molmil
Structure of Dictyostelium discoideum Myosin VII SH3 domain with adjacent proline rich region
分子名称: Class VII unconventional myosin
著者Wang, Q, Deloia, M.A, Kang, Y, Litchke, C, Titus, M.A, Walters, K.J.
登録日2006-08-10
公開日2007-01-09
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The SH3 domain of a M7 interacts with its C-terminal proline-rich region.
Protein Sci., 16, 2007
2KBJ
DownloadVisualize
BU of 2kbj by Molmil
solution structure of BmKalphaTx11 (minor conformation)
分子名称: Toxin Bmka2
著者Zhu, J, Wu, H.
登録日2008-11-28
公開日2009-12-08
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Solution structure of BmKalphaTx11, a toxin from the venom of the Chinese scorpion Buthus martensii Karsch
Biochem.Biophys.Res.Commun., 391, 2010
6M3G
DownloadVisualize
BU of 6m3g by Molmil
Crystal structure of human HPF1
分子名称: Histone PARylation factor 1
著者Sun, F.H, Yun, C.H.
登録日2020-03-03
公開日2021-03-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献HPF1 remodels the active site of PARP1 to enable the serine ADP-ribosylation of histones.
Nat Commun, 12, 2021
6M3I
DownloadVisualize
BU of 6m3i by Molmil
Crystal structure of HPF1/PARP1 complex
分子名称: BENZAMIDE, Histone PARylation factor 1, Poly [ADP-ribose] polymerase 1
著者Sun, F.H, Yun, C.H.
登録日2020-03-03
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献HPF1 remodels the active site of PARP1 to enable the serine ADP-ribosylation of histones.
Nat Commun, 12, 2021
6M3H
DownloadVisualize
BU of 6m3h by Molmil
Crystal structure of mouse HPF1
分子名称: Histone PARylation factor 1
著者Sun, F.H, Yun, C.H.
登録日2020-03-03
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献HPF1 remodels the active site of PARP1 to enable the serine ADP-ribosylation of histones.
Nat Commun, 12, 2021
6LUO
DownloadVisualize
BU of 6luo by Molmil
Structure of nurse shark beta-2-microglobulin
分子名称: Beta-2-microglobulin
著者Xia, C, Wu, Y.
登録日2020-01-30
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献The Structure of a Peptide-Loaded Shark MHC Class I Molecule Reveals Features of the Binding between beta 2 -Microglobulin and H Chain Conserved in Evolution.
J Immunol., 2021
6LUP
DownloadVisualize
BU of 6lup by Molmil
Crystal structure of shark MHC CLASS I for 2.3 angstrom
分子名称: Beta-2-microglobulin, MHC class I protein, PHE-ALA-ASN-PHE-PHE-ILE-ARG-GLY-LEU
著者Wu, Y, Xia, C.
登録日2020-01-30
公開日2021-04-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献The Structure of a Peptide-Loaded Shark MHC Class I Molecule Reveals Features of the Binding between beta 2 -Microglobulin and H Chain Conserved in Evolution.
J Immunol., 2021
6N2G
DownloadVisualize
BU of 6n2g by Molmil
Crystal structure of Caenorhabditis elegans NAP1
分子名称: Nucleosome Assembly Protein
著者Bhattacharyya, S, DArcy, S.
登録日2018-11-13
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Characterization of Caenorhabditis elegans Nucleosome Assembly Protein 1 Uncovers the Role of Acidic Tails in Histone Binding.
Biochemistry, 58, 2019
7E8C
DownloadVisualize
BU of 7e8c by Molmil
SARS-CoV-2 S-6P in complex with 9 Fabs
分子名称: 368-2 H, 368-2 L, 604 H, ...
著者Du, S, Xiao, J, Zhang, Z.
登録日2021-03-01
公開日2021-06-09
最終更新日2021-07-14
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7E7X
DownloadVisualize
BU of 7e7x by Molmil
SARS-CoV-2 Spike Protein N terminal domain in Complex with N11 Fab
分子名称: N11 Fab Light chain, N11 Fab heavy chain, Spike protein S1
著者Zhang, Z, Shuo, D, Xiao, J.
登録日2021-02-28
公開日2021-06-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7E8F
DownloadVisualize
BU of 7e8f by Molmil
SARS-CoV-2 NTD in complex with N9 Fab
分子名称: 368-2 H, 368-2 L, 604 H, ...
著者Du, S, Xiao, J, Zhang, Z.
登録日2021-03-01
公開日2021-06-09
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献Humoral immune response to circulating SARS-CoV-2 variants elicited by inactivated and RBD-subunit vaccines.
Cell Res., 31, 2021
7CQW
DownloadVisualize
BU of 7cqw by Molmil
GmaS/ADP complex-Conformation 1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.297 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQQ
DownloadVisualize
BU of 7cqq by Molmil
GmaS in complex with AMPPNP and MetSox
分子名称: (2S)-2-AMINO-4-(METHYLSULFONIMIDOYL)BUTANOIC ACID, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.295 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQL
DownloadVisualize
BU of 7cql by Molmil
Apo GmaS without ligand
分子名称: Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQN
DownloadVisualize
BU of 7cqn by Molmil
GmaS in complex with AMPPCP
分子名称: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.962 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQU
DownloadVisualize
BU of 7cqu by Molmil
GmaS/ADP/MetSox-P complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MAGNESIUM ION, ...
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
7CQX
DownloadVisualize
BU of 7cqx by Molmil
GmaS/ADP complex-Conformation 2
分子名称: ADENOSINE-5'-DIPHOSPHATE, Type III glutamate--ammonia ligase
著者Li, C.Y, Zhang, Y.Z.
登録日2020-08-11
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Crystal structures of gamma-glutamylmethylamide synthetase provide insight into bacterial metabolism of oceanic monomethylamine.
J.Biol.Chem., 296, 2020
2KBH
DownloadVisualize
BU of 2kbh by Molmil
solution structure of BmKalphaTx11 (major conformation)
分子名称: Toxin Bmka2
著者Zhu, J, Wu, H.
登録日2008-11-28
公開日2009-12-08
最終更新日2019-12-11
実験手法SOLUTION NMR
主引用文献Solution structure of BmKalphaTx11, a toxin from the venom of the Chinese scorpion Buthus martensii Karsch
Biochem.Biophys.Res.Commun., 391, 2010
2N3T
DownloadVisualize
BU of 2n3t by Molmil
Solution structure of the Rpn1 substrate receptor site toroid 1 (T1)
分子名称: 26S proteasome regulatory subunit RPN1
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2N3W
DownloadVisualize
BU of 2n3w by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode
分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon