Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7KED
DownloadVisualize
BU of 7ked by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Oh, J, Wang, W, Wang, D.
登録日2020-10-10
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
7KEE
DownloadVisualize
BU of 7kee by Molmil
RNA polymerase II elongation complex with unnatural base dTPT3, rNaMTP bound to E-site
分子名称: (1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol, DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, ...
著者Oh, J, Wang, D.
登録日2020-10-10
公開日2021-06-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.45 Å)
主引用文献Transcriptional processing of an unnatural base pair by eukaryotic RNA polymerase II.
Nat.Chem.Biol., 17, 2021
6SNJ
DownloadVisualize
BU of 6snj by Molmil
Solution structure of the FUS/TLS RNA recognition motif in complex with U1 snRNA stem loop III
分子名称: RNA-binding protein FUS, U1 snRNA stem loop III, RNA (28-MER)
著者Campagne, S, Allain, F.H.
登録日2019-08-26
公開日2020-10-28
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Aberrant interaction of FUS with the U1 snRNA provides a molecular mechanism of FUS induced amyotrophic lateral sclerosis.
Nat Commun, 11, 2020
3BY4
DownloadVisualize
BU of 3by4 by Molmil
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1
著者Messick, T.E, Marmorstein, R.
登録日2008-01-15
公開日2008-02-19
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
J.Biol.Chem., 283, 2008
6T6K
DownloadVisualize
BU of 6t6k by Molmil
Y201W mutant of the orange carotenoid protein from Synechocystis at pH 6.5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCINE, ...
著者Sluchanko, N.N, Gushchin, I, Botnarevskiy, V.S, Slonimskiy, Y.B, Remeeva, A, Kovalev, K, Stepanov, A.V, Gordeliy, V, Maksimov, E.G.
登録日2019-10-18
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Commun Biol, 4, 2021
6T6M
DownloadVisualize
BU of 6t6m by Molmil
Y201W mutant of the orange carotenoid protein from Synechocystis at pH 5.5
分子名称: GLYCEROL, HISTIDINE, Orange carotenoid-binding protein, ...
著者Sluchanko, N.N, Gushchin, I, Botnarevskiy, V.S, Slonimskiy, Y.B, Remeeva, A, Kovalev, K, Stepanov, A.V, Gordeliy, V, Maksimov, E.G.
登録日2019-10-18
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Commun Biol, 4, 2021
3C0R
DownloadVisualize
BU of 3c0r by Molmil
Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1
著者Messick, T.E, Marmorstein, R.
登録日2008-01-21
公開日2008-02-19
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (2.315 Å)
主引用文献Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein
J.Biol.Chem., 283, 2008
2N4P
DownloadVisualize
BU of 2n4p by Molmil
Solution structure of the n-terminal domain of tdp-43
分子名称: TAR DNA-binding protein 43
著者Mompean, M, Romano, V, Pantoja-Uceda, D, Stuani, C, Baralle, F, Buratti, E, Laurents, D.V.
登録日2015-06-26
公開日2016-01-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献The TDP-43 N-terminal domain structure at high resolution.
Febs J., 283, 2016
8DMB
DownloadVisualize
BU of 8dmb by Molmil
Structure of Desulfovirgula thermocuniculi IsrB (DtIsrB) in complex with omega RNA and target DNA
分子名称: MAGNESIUM ION, Ubiquitin-like protein SMT3,IsrB protein,monomeric superfolder Green Fluorescent Protein, non-target DNA, ...
著者Seiichi, H, Kappel, K, Zhang, F.
登録日2022-07-08
公開日2022-10-19
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the OMEGA nickase IsrB in complex with omega RNA and target DNA.
Nature, 610, 2022
8EL8
DownloadVisualize
BU of 8el8 by Molmil
CryoEM structure of Resistance to Inhibitors of Cholinesterase-8B (Ric-8B) in complex with olfactory G protein alpha olf
分子名称: Guanine nucleotide-binding protein G(olf) subunit alpha, Isoform 1 of Synembryn-B
著者Papasergi-Scott, M.M, Skiniotis, G.
登録日2022-09-23
公開日2023-03-01
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structures of Ric-8B in complex with G alpha protein folding clients reveal isoform specificity mechanisms.
Structure, 31, 2023
8EL7
DownloadVisualize
BU of 8el7 by Molmil
CryoEM structure of Resistance to Inhibitors of Cholinesterase-8B (Ric-8B) in complex with G alpha s
分子名称: Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, Isoform 1 of Synembryn-B
著者Papasergi-Scott, M.M, Skiniotis, G.
登録日2022-09-23
公開日2023-03-01
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structures of Ric-8B in complex with G alpha protein folding clients reveal isoform specificity mechanisms.
Structure, 31, 2023
3P23
DownloadVisualize
BU of 3p23 by Molmil
Crystal structure of the Human kinase and RNase domains in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ...
著者Ali, M.M.U, Pearl, L.H.
登録日2010-10-01
公開日2011-02-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the Ire1 autophosphorylation complex and implications for the unfolded protein response.
Embo J., 30, 2011
3RTV
DownloadVisualize
BU of 3rtv by Molmil
Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with natural primer/template DNA
分子名称: (5'-D(*AP*AP*AP*GP*CP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DDG))-3'), 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ...
著者Marx, A, Diederichs, K, Betz, K.
登録日2011-05-04
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献KlenTaq polymerase replicates unnatural base pairs by inducing a Watson-Crick geometry.
Nat.Chem.Biol., 8, 2012
3S04
DownloadVisualize
BU of 3s04 by Molmil
Crystal structure of Escherichia coli type I signal peptidase in complex with an Arylomycin Lipoglycopeptide Antibiotic
分子名称: 14-methylhexadec-9-enoic acid, Glyco-Arylomycin, Signal peptidase I, ...
著者Paetzel, M, Luo, C.
登録日2011-05-13
公開日2011-10-05
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Synthesis and characterization of the arylomycin lipoglycopeptide antibiotics and the crystallographic analysis of their complex with signal peptidase.
J.Am.Chem.Soc., 133, 2011
6ZJF
DownloadVisualize
BU of 6zjf by Molmil
Crystal structure of STK17B (DRAK2) in complex with AP-229
分子名称: 1,2-ETHANEDIOL, 2-[6-(4-cyclopropylphenyl)thieno[3,2-d]pyrimidin-4-yl]sulfanylethanoic acid, Serine/threonine-protein kinase 17B
著者Chaikuad, A, Picado, A, Willson, T, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-06-28
公開日2020-07-29
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
6ZDW
DownloadVisualize
BU of 6zdw by Molmil
Crystal structure of the ribonuclease core of R3B2
分子名称: DRBM domain-containing protein
著者Canovas-Marquez, J.T, Garre, V, Falk, S.
登録日2020-06-15
公開日2021-03-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献An RNase III ribonuclease has evolved in early-diverging fungi to cut single-stranded RNA
Nucleic Acids Res., 2021
7AKG
DownloadVisualize
BU of 7akg by Molmil
Crystal structure of STK17B with bound dovitinib
分子名称: 1,2-ETHANEDIOL, 4-amino-5-fluoro-3-[5-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]quinolin-2(1H)-one, Serine/threonine-protein kinase 17B
著者Chaikuad, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-09-30
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A Chemical Probe for Dark Kinase STK17B Derives Its Potency and High Selectivity through a Unique P-Loop Conformation.
J.Med.Chem., 63, 2020
8UL9
DownloadVisualize
BU of 8ul9 by Molmil
Cholinephosphotransferase in complex with diacylglycerol
分子名称: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Cholinephosphotransferase 1, DIACYL GLYCEROL, ...
著者Roberts, J.R, Maeda, S, Ohi, M.D.
登録日2023-10-16
公開日2024-10-23
最終更新日2025-01-15
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural basis for catalysis and selectivity of phospholipid synthesis by eukaryotic choline-phosphotransferase.
Nat Commun, 16, 2025
8OXR
DownloadVisualize
BU of 8oxr by Molmil
Structure of the N-terminal didomain d1_d2 of the Thrombospondin type-1 domain-containing 7A
分子名称: Thrombospondin type-1 domain-containing protein 7A
著者Bochel, A, Mortensen, S.A, Chojnowski, G, Wilmanns, M.
登録日2023-05-02
公開日2024-05-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the N-terminal didomain d1_d2 of the Thrombospondin type-1 domain-containing 7A
To Be Published
8PWW
DownloadVisualize
BU of 8pww by Molmil
PfRH5 bound to monoclonal antibody MAD8-151
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Farrell, B, Higgins, M.K.
登録日2023-07-21
公開日2024-06-05
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (1.945 Å)
主引用文献Natural malaria infection elicits rare but potent neutralizing antibodies to the blood-stage antigen RH5.
Cell, 187, 2024
8PWU
DownloadVisualize
BU of 8pwu by Molmil
PfRH5 bound to monoclonal antibody MAD10-255
分子名称: Reticulocyte-binding protein homolog 5, monoclonal antibody MAD10-255
著者Farrell, B, Higgins, M.K.
登録日2023-07-21
公開日2024-06-05
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (3.148 Å)
主引用文献Natural malaria infection elicits rare but potent neutralizing antibodies to the blood-stage antigen RH5.
Cell, 187, 2024
8Q5D
DownloadVisualize
BU of 8q5d by Molmil
PfRH5 bound to monoclonal antibody MAD10-466
分子名称: Monoclonal antibody MAD10-466 heavy chain, Monoclonal antibody MAD10-466 light chain, Reticulocyte-binding protein homolog 5
著者Farrell, B, Higgins, M.K.
登録日2023-08-08
公開日2024-06-05
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Natural malaria infection elicits rare but potent neutralizing antibodies to the blood-stage antigen RH5.
Cell, 187, 2024
8PWV
DownloadVisualize
BU of 8pwv by Molmil
PfRH5 bound to monoclonal antibody MAD8-502
分子名称: Reticulocyte-binding protein homolog 5, monoclonal antibody MAD8-502
著者Farrell, B, Higgins, M.K.
登録日2023-07-21
公開日2024-06-05
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Natural malaria infection elicits rare but potent neutralizing antibodies to the blood-stage antigen RH5.
Cell, 187, 2024
8PWX
DownloadVisualize
BU of 8pwx by Molmil
PfRH5 bound to monoclonal antibody R5.008
分子名称: GLYCEROL, Reticulocyte-binding protein homolog 5, scFv fragment for antibody R5.008
著者Farrell, B, Higgins, M.K.
登録日2023-07-21
公開日2024-06-05
最終更新日2024-12-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Natural malaria infection elicits rare but potent neutralizing antibodies to the blood-stage antigen RH5.
Cell, 187, 2024
7SF8
DownloadVisualize
BU of 7sf8 by Molmil
GPR56 (ADGRG1) 7TM domain bound to tethered agonist in complex with G protein heterotrimer
分子名称: G protein subunit 13 (Gi2-mini-G13 chimera), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Barros-Alvarez, X, Panova, O, Skiniotis, G.
登録日2021-10-03
公開日2022-04-27
最終更新日2024-11-20
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献The tethered peptide activation mechanism of adhesion GPCRs.
Nature, 604, 2022

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon