Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8WMU
DownloadVisualize
BU of 8wmu by Molmil
Structural basis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents with dual-binding sites
Descriptor: (5~{S},5~{a}~{S},8~{a}~{R},9~{R})-5-(quinolin-6-ylamino)-9-(3,4,5-trimethoxyphenyl)-5~{a},6,8~{a},9-tetrahydro-5~{H}-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Zhao, W, Bi, J.
Deposit date:2023-10-04
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents with dual-binding sites
To Be Published
8WMO
DownloadVisualize
BU of 8wmo by Molmil
Crystal structure analysis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents
Descriptor: (5~{S},5~{a}~{R},8~{a}~{R},9~{R})-5-pyrimidin-2-ylsulfanyl-9-(3,4,5-trimethoxyphenyl)-5~{a},6,8~{a},9-tetrahydro-5~{H}-[2]benzofuro[5,6-f][1,3]benzodioxol-8-one, 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Zhao, W, Bi, J.
Deposit date:2023-10-04
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Crystal structure analysis of tubulin and heterocyclic podophyllotoxins complex for anticancer agents
To Be Published
7XNA
DownloadVisualize
BU of 7xna by Molmil
Crystal structure of somatostatin receptor 2 (SSTR2) with peptide antagonist CYN 154806
Descriptor: CYN 154806, Somatostatin receptor type 2,Endo-1,4-beta-xylanase
Authors:Zhao, W, Han, S, Qiu, N, Feng, W, Lu, M, Yang, D, Wang, M.-W, Wu, B, Zhao, Q.
Deposit date:2022-04-28
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural insights into ligand recognition and selectivity of somatostatin receptors.
Cell Res., 32, 2022
7XN9
DownloadVisualize
BU of 7xn9 by Molmil
Crystal structure of SSTR2 and L-054,522 complex
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Somatostatin receptor type 2,Endo-1,4-beta-xylanase, tert-butyl (2S)-6-azanyl-2-[[(2R,3S)-3-(1H-indol-3-yl)-2-[[4-(2-oxidanylidene-3H-benzimidazol-1-yl)piperidin-1-yl]carbonylamino]butanoyl]amino]hexanoate
Authors:Zhao, W, Han, S, Qiu, N, Feng, W, Lu, M, Yang, D, Wang, M.-W, Wu, B, Zhao, Q.
Deposit date:2022-04-28
Release date:2022-08-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into ligand recognition and selectivity of somatostatin receptors.
Cell Res., 32, 2022
7XK8
DownloadVisualize
BU of 7xk8 by Molmil
Cryo-EM structure of the Neuromedin U receptor 2 (NMUR2) in complex with G Protein and its endogeneous Peptide-Agonist NMU25
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(i) subunit alpha-1, ...
Authors:Zhao, W, Wenru, Z, Mu, W, Minmin, L, Shutian, C, Tingting, T, Gisela, S, Holger, W, Albert, B, Cuiying, Y, Xiaojing, C, Han, S, Wu, B, Zhao, Q.
Deposit date:2022-04-19
Release date:2023-02-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Ligand recognition and activation of neuromedin U receptor 2.
Nat Commun, 13, 2022
5JCB
DownloadVisualize
BU of 5jcb by Molmil
Microtubule depolymerizing agent podophyllotoxin derivative YJTSF1
Descriptor: (5R,5aR,8aS,9R)-9-[(4H-1,2,4-triazol-3-yl)sulfanyl]-5-(3,4,5-trimethoxyphenyl)-5,8,8a,9-tetrahydro-2H-furo[3',4':6,7]naphtho[2,3-d][1,3]dioxol-6(5aH)-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Guan, Z, Zhao, W, Yin, P.
Deposit date:2016-04-14
Release date:2017-09-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Inhibition of Tubulin by the Antitumor Agent 4 beta-(1,2,4-triazol-3-ylthio)-4-deoxypodophyllotoxin.
ACS Chem. Biol., 12, 2017
4UX5
DownloadVisualize
BU of 4ux5 by Molmil
Structure of DNA complex of PCG2
Descriptor: 5'-D(*CP*AP*AP*TP*GP*AP*CP*GP*CP*GP*TP*AP*AP*GP)-3', 5'-D(*CP*TP*TP*AP*CP*GP*CP*GP*TP*CP*AP*TP*TP*GP)-3', TRANSCRIPTION FACTOR MBP1
Authors:Liu, J, Huang, J, Zhao, Y, Liu, H, Wang, D, Yang, J, Zhao, W, Taylor, I.A, Peng, Y.
Deposit date:2014-08-19
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of DNA Recognition by Pcg2 Reveals a Novel DNA Binding Mode for Winged Helix-Turn-Helix Domains.
Nucleic Acids Res., 43, 2015
3S69
DownloadVisualize
BU of 3s69 by Molmil
Crystal structure of saxthrombin
Descriptor: CALCIUM ION, Thrombin-like enzyme defibrase
Authors:Huang, K, Zhao, W, Teng, M, Niu, L.
Deposit date:2011-05-25
Release date:2012-05-23
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Structure of saxthrombin, a thrombin-like enzyme from Gloydius saxatilis.
Acta Crystallogr.,Sect.F, 67, 2011
4EJS
DownloadVisualize
BU of 4ejs by Molmil
Structure of yeast elongator subcomplex Elp456
Descriptor: Elongator complex protein 4, Elongator complex protein 5, Elongator complex protein 6
Authors:Lin, Z, Zhao, W, Long, J, Shen, Y.
Deposit date:2012-04-07
Release date:2012-05-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.606 Å)
Cite:Crystal structure of elongator subcomplex Elp4-6
J.Biol.Chem., 287, 2012
6U5G
DownloadVisualize
BU of 6u5g by Molmil
MicroED structure of a FIB-milled CypA Crystal
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Wolff, A.M, Martynowycz, M.W, Zhao, W, Gonen, T, Fraser, J.S, Thompson, M.C.
Deposit date:2019-08-27
Release date:2020-01-29
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (2.5 Å)
Cite:Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals
Iucrj, 7, 2020
7RSJ
DownloadVisualize
BU of 7rsj by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-{4-[(7R,8R)-4-oxo-7-(propan-2-yl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl]pyridin-2-yl}cyclopropanecarboxamide, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSP
DownloadVisualize
BU of 7rsp by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: (7R,8R)-2-[(3R)-3-methylmorpholin-4-yl]-7-(propan-2-yl)-6,7-dihydropyrazolo[1,5-a]pyrazin-4(5H)-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSV
DownloadVisualize
BU of 7rsv by Molmil
Structure of the VPS34 kinase domain with compound 5
Descriptor: (5aS,8aR,9S)-2-[(3R)-3-methylmorpholin-4-yl]-5,5a,6,7,8,8a-hexahydro-4H-cyclopenta[e]pyrazolo[1,5-a]pyrazin-4-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
4FMM
DownloadVisualize
BU of 4fmm by Molmil
Dimeric Sec14 family homolog 3 from Saccharomyces cerevisiae presents some novel features of structure that lead to a surprising "dimer-monomer" state change induced by substrate binding
Descriptor: GLYCEROL, MAGNESIUM ION, Phosphatidylinositol transfer protein PDR16
Authors:Yuan, Y, Zhao, W, Wang, X, Gao, Y, Niu, L, Teng, M.
Deposit date:2012-06-18
Release date:2013-02-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Dimeric Sfh3 has structural changes in its binding pocket that are associated with a dimer-monomer state transformation induced by substrate binding.
Acta Crystallogr.,Sect.D, 69, 2013
6PKM
DownloadVisualize
BU of 6pkm by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.17A resolution (#8)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.17 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKQ
DownloadVisualize
BU of 6pkq by Molmil
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.85A resolution (#11)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (1.85 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKS
DownloadVisualize
BU of 6pks by Molmil
MicroED structure of proteinase K from low-dose merged lamellae that were not pre-coated with platinum 2.16A resolution (LD)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2024-10-09
Method:ELECTRON CRYSTALLOGRAPHY (2.16 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKL
DownloadVisualize
BU of 6pkl by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.59A resolution (#7)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.59 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKT
DownloadVisualize
BU of 6pkt by Molmil
MicroED structure of proteinase K from merging low-dose, platinum pre-coated lamellae at 1.85A resolution (LDPT)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (1.85 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKJ
DownloadVisualize
BU of 6pkj by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.17A resolution (#2)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.176 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKO
DownloadVisualize
BU of 6pko by Molmil
MicroED structure of proteinase K from a platinum coated, unpolished, single lamella at 2.07A resolution (#12)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2024-10-16
Method:ELECTRON CRYSTALLOGRAPHY (2.07 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKN
DownloadVisualize
BU of 6pkn by Molmil
MicroED structure of proteinase K from an unpolished, platinum-coated, single lamella at 2.08A resolution (#9)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.08 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKR
DownloadVisualize
BU of 6pkr by Molmil
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.79A resolution (#13)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2024-10-09
Method:ELECTRON CRYSTALLOGRAPHY (1.79 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKK
DownloadVisualize
BU of 6pkk by Molmil
MicroED structure of proteinase K from an uncoated, single lamella at 2.18A resolution (#5)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (2.176 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019
6PKP
DownloadVisualize
BU of 6pkp by Molmil
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.91A resolution (#10)
Descriptor: Proteinase K
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2019-06-29
Release date:2019-09-04
Last modified:2019-12-18
Method:ELECTRON CRYSTALLOGRAPHY (1.91 Å)
Cite:Qualitative Analyses of Polishing and Precoating FIB Milled Crystals for MicroED.
Structure, 27, 2019

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon