Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3DN9
DownloadVisualize
BU of 3dn9 by Molmil
Carboxysome Subunit, CcmK1 C-terminal deletion mutant
Descriptor: CcmK1 C-terminal deletion mutant, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2008-07-01
Release date:2009-01-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Insights from multiple structures of the shell proteins from the beta-carboxysome.
Protein Sci., 18, 2009
1YTF
DownloadVisualize
BU of 1ytf by Molmil
YEAST TFIIA/TBP/DNA COMPLEX
Descriptor: DNA (5'-D(*GP*TP*TP*TP*TP*AP*TP*AP*TP*AP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*AP*TP*GP*TP*AP*TP*AP*TP*AP*AP*AP*AP*C)-3'), PROTEIN (TATA BINDING PROTEIN (TBP)), ...
Authors:Tan, S, Hunziker, Y, Sargent, D.F, Richmond, T.J.
Deposit date:1996-04-05
Release date:1996-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of a yeast TFIIA/TBP/DNA complex.
Nature, 381, 1996
1MNM
DownloadVisualize
BU of 1mnm by Molmil
YEAST MATALPHA2/MCM1/DNA TERNARY TRANSCRIPTION COMPLEX CRYSTAL STRUCTURE
Descriptor: DNA (STE6 OPERATOR DNA), PROTEIN (MAT ALPHA-2 TRANSCRIPTIONAL REPRESSOR), PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR)
Authors:Tan, S, Richmond, T.J.
Deposit date:1997-11-03
Release date:1998-03-18
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex.
Nature, 391, 1998
5XJ4
DownloadVisualize
BU of 5xj4 by Molmil
Complex structure of durvalumab-scFv/PD-L1
Descriptor: Programmed cell death 1 ligand 1, durvalumab-VH, durvalumab-VL
Authors:Tan, S, Liu, K, Chai, Y, Gao, G.F, Qi, J.
Deposit date:2017-04-29
Release date:2018-04-25
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Distinct PD-L1 binding characteristics of therapeutic monoclonal antibody durvalumab
Protein Cell, 9, 2018
5WT9
DownloadVisualize
BU of 5wt9 by Molmil
Complex structure of PD-1 and nivolumab-Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy Chain of Nivolumab, Light Chain of Nivolumab, ...
Authors:Tan, S, Zhang, H, Chai, Y, Song, H, Tong, Z, Wang, Q, Qi, J, Wong, G, Zhu, X, Liu, W.J, Gao, S, Wang, Z, Shi, Y, Yang, F, Gao, G.F, Yan, J.
Deposit date:2016-12-10
Release date:2017-02-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:An unexpected N-terminal loop in PD-1 dominates binding by nivolumab.
Nat Commun, 8, 2017
8WT4
DownloadVisualize
BU of 8wt4 by Molmil
Crystal structure of DL-endopeptidase CwlO complexed with IseA
Descriptor: Peptidoglycan DL-endopeptidase CwlO, Uncharacterized protein YoeB
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-10-17
Release date:2024-07-03
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 291, 2024
8WT3
DownloadVisualize
BU of 8wt3 by Molmil
Crystal structure of peptidoglycan DL-endopeptidase CwlO
Descriptor: CHLORIDE ION, Peptidoglycan DL-endopeptidase CwlO
Authors:Tandukar, S, Kwon, E, Kim, D.Y.
Deposit date:2023-10-17
Release date:2024-07-03
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of the peptidoglycan DL-endopeptidase CwlO complexed with its inhibitory protein IseA.
Febs J., 291, 2024
7OT4
DownloadVisualize
BU of 7ot4 by Molmil
Crystal structure of MsrA variant C198C206 from Escherichia coli, oxidized
Descriptor: POTASSIUM ION, Peptide methionine sulfoxide reductase MsrA
Authors:Napolitano, S, Glockshuber, R.
Deposit date:2021-06-09
Release date:2022-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Exploring the unique mechanism of methionine sulphoxide reduction by Escherichia coli
To Be Published
6YEV
DownloadVisualize
BU of 6yev by Molmil
Crystal structure of MsrA C206 and Trx C35S complex from Escherichia coli
Descriptor: Peptide methionine sulfoxide reductase MsrA, SODIUM ION, Thioredoxin 1
Authors:Napolitano, S, Zyla, D, Glockshuber, R.
Deposit date:2020-03-25
Release date:2021-04-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure of a complex between the single-cysteine mutant MsrA C206 and Trx C35S from Escherichia coli
To Be Published
7S0B
DownloadVisualize
BU of 7s0b by Molmil
Structure of the SARS-CoV-2 RBD in complex with neutralizing antibody N-612-056
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N-612-056 Fab Heavy Chain, N-612-056 Light Chain, ...
Authors:Tanaka, S, Barnes, C.O, Bjorkman, P.J.
Deposit date:2021-08-30
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Rapid identification of neutralizing antibodies against SARS-CoV-2 variants by mRNA display.
Cell Rep, 38, 2022
7UX0
DownloadVisualize
BU of 7ux0 by Molmil
Human Sperm TMEM95 Ectodomain
Descriptor: Sperm-egg fusion protein TMEM95, TRIETHYLENE GLYCOL, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Tang, S, Kim, P.S.
Deposit date:2022-05-04
Release date:2022-10-12
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Human sperm TMEM95 binds eggs and facilitates membrane fusion.
Proc.Natl.Acad.Sci.USA, 119, 2022
2VXQ
DownloadVisualize
BU of 2vxq by Molmil
Crystal structure of the major grass pollen allergen Phl p 2 in complex with its specific IgE-Fab
Descriptor: FAB, POLLEN ALLERGEN PHL P 2
Authors:Padavattan, S, Flicker, S, Schirmer, T, Madritsch, C, Randow, S, Reese, G, Vieths, S, Lupinek, C, Ebner, C, Valenta, R, Markovic-Housley, Z.
Deposit date:2008-07-08
Release date:2009-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-Affinity Ige Recognition of a Conformational Epitope of the Major Respiratory Allergen Phl P 2 as Revealed by X-Ray Crystallography.
J.Immunol., 182, 2009
3MN8
DownloadVisualize
BU of 3mn8 by Molmil
Structure of Drosophila melanogaster carboxypeptidase D isoform 1B short
Descriptor: (2-GUANIDINOETHYLMERCAPTO)SUCCINIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Tanco, S, Arolas, J.L, Guevara, T, Lorenzo, J, Aviles, F.X, Gomis-Ruth, F.X.
Deposit date:2010-04-21
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure-Function Analysis of the Short Splicing Variant Carboxypeptidase Encoded by Drosophila melanogaster silver.
J.Mol.Biol., 401, 2010
2AW9
DownloadVisualize
BU of 2aw9 by Molmil
Superoxide dismutase with manganese from Deinococcus radiodurans
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn]
Authors:Tanaka, S, Sawaya, M.R, Chan, S, Perry, L.J.
Deposit date:2005-08-31
Release date:2006-08-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of manganese superoxide dismutase from Deinococcus radiodurans
To be Published
1XUO
DownloadVisualize
BU of 1xuo by Molmil
X-ray structure of LFA-1 I-domain bound to a 1,4-diazepane-2,5-dione inhibitor at 1.8A resolution
Descriptor: (2R)-2-[3-ISOBUTYL-2,5-DIOXO-4-(QUINOLIN-3-YLMETHYL)-1,4-DIAZEPAN-1-YL]-N-METHYL-3-(2-NAPHTHYL)PROPANAMIDE, Integrin alpha-L, MAGNESIUM ION
Authors:Wattanasin, S, Kallen, J, Myers, S, Guo, Q, Sabio, M, Ehrhardt, C, Albert, R, Hommel, U, Weckbecker, G, Welzenbach, K.
Deposit date:2004-10-26
Release date:2005-10-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1,4-Diazepane-2,5-diones as novel inhibitors of LFA-1
Bioorg.Med.Chem.Lett., 15, 2005
6D8J
DownloadVisualize
BU of 6d8j by Molmil
Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Polyketide synthase, ...
Authors:Tang, S, Sacchettini, J.
Deposit date:2018-04-26
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mycobacterium tuberculosis polyketide synthase 13 N-terminal acyl carrier protein domain
To be Published
3IA0
DownloadVisualize
BU of 3ia0 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutS-G39V mutant
Descriptor: Ethanolamine utilization protein eutS
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-13
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I96
DownloadVisualize
BU of 3i96 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutS
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CHLORIDE ION, Ethanolamine utilization protein eutS, ...
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-10
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I87
DownloadVisualize
BU of 3i87 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutL Open Form
Descriptor: CHLORIDE ION, Ethanolamine utilization protein eutL
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-09
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
3I71
DownloadVisualize
BU of 3i71 by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutK C-terminal domain
Descriptor: CITRATE ANION, Ethanolamine utilization protein eutK
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010
6UMV
DownloadVisualize
BU of 6umv by Molmil
Human apo PD-1 double mutant
Descriptor: CHLORIDE ION, Programmed cell death protein 1
Authors:Tang, S, Kim, P.S.
Deposit date:2019-10-10
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.424 Å)
Cite:A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
6SYM
DownloadVisualize
BU of 6sym by Molmil
Crystal structure of Escherichia coli MsrB (reduced form)
Descriptor: Peptide methionine sulfoxide reductase MsrB, ZINC ION
Authors:Napolitano, S, Zyla, D, Glockshuber, R.
Deposit date:2019-09-30
Release date:2020-10-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.6302 Å)
Cite:Structure of Peptide methionine sulfoxide reductase MsrB at 1.63 Angstrom resolution
To Be Published
6UMT
DownloadVisualize
BU of 6umt by Molmil
High-affinity human PD-1 PD-L2 complex
Descriptor: MAGNESIUM ION, Programmed cell death 1 ligand 2, Programmed cell death protein 1
Authors:Tang, S, Kim, P.S.
Deposit date:2019-10-10
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.986 Å)
Cite:A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
6UMU
DownloadVisualize
BU of 6umu by Molmil
Human apo PD-1 triple mutant
Descriptor: CHLORIDE ION, Programmed cell death protein 1
Authors:Tang, S, Kim, P.S.
Deposit date:2019-10-10
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.183 Å)
Cite:A high-affinity human PD-1/PD-L2 complex informs avenues for small-molecule immune checkpoint drug discovery.
Proc.Natl.Acad.Sci.USA, 116, 2019
3I6P
DownloadVisualize
BU of 3i6p by Molmil
Ethanolamine Utilization Microcompartment Shell Subunit, EutM
Descriptor: Ethanolamine utilization protein eutM, SULFATE ION
Authors:Tanaka, S, Sawaya, M.R, Yeates, T.O.
Deposit date:2009-07-07
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Mechanisms of a Protein-Based Organelle in Escherichia coli.
Science, 327, 2010

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon