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7XLB
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BU of 7xlb by Molmil
Cryo-EM structure of human pannexin 2
Descriptor: Pannexin-2
Authors:Hang, Z, Huawei, Z, Daping, W.
Deposit date:2022-04-21
Release date:2023-03-15
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Cryo-EM structure of human heptameric pannexin 2 channel
Nat Commun, 14, 2023
6KIG
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BU of 6kig by Molmil
Structure of cyanobacterial photosystem I-IsiA supercomplex
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Cao, P, Cao, D.F, Si, L, Su, X.D, Chang, W.R, Liu, Z.F, Zhang, X.Z, Li, M.
Deposit date:2019-07-18
Release date:2020-02-12
Last modified:2020-03-04
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for energy and electron transfer of the photosystem I-IsiA-flavodoxin supercomplex.
Nat.Plants, 6, 2020
4EIW
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BU of 4eiw by Molmil
Whole cytosolic region of atp-dependent metalloprotease FtsH (G399L)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH
Authors:Suno, R, Niwa, H, Tsuchiya, D, Yoshida, M, Morikawa, K.
Deposit date:2012-04-06
Release date:2012-06-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of the whole cytosolic region of ATP-dependent protease FtsH
Mol.Cell, 22, 2006
5HAV
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BU of 5hav by Molmil
Sperm whale myoglobin mutant L29H F33Y F43H (F33Y CuBMb) with oxygen bound
Descriptor: Myoglobin, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Petrik, I.D, Lu, Y.
Deposit date:2015-12-31
Release date:2016-01-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.268 Å)
Cite:Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin.
J.Am.Chem.Soc., 138, 2016
5WY2
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BU of 5wy2 by Molmil
Human Snx5 PX domain in complex with Chlamydia IncE C terminus
Descriptor: IncE, Sorting nexin-5
Authors:Sun, Q, Yong, X, Jia, D.
Deposit date:2017-01-10
Release date:2017-11-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional insights into sorting nexin 5/6 interaction with bacterial effector IncE.
Signal Transduct Target Ther, 2, 2017
5ZND
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BU of 5znd by Molmil
8-mer nanotube derived from 24-mer rHuHF nanocage
Descriptor: Ferritin heavy chain
Authors:Wang, W.M, Wang, L.L, Zang, J.C, Chen, H, Zhao, G.H, Wang, H.F.
Deposit date:2018-04-09
Release date:2018-11-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Selective Elimination of the Key Subunit Interfaces Facilitates Conversion of Native 24-mer Protein Nanocage into 8-mer Nanorings.
J. Am. Chem. Soc., 140, 2018
7YA1
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BU of 7ya1 by Molmil
Cryo-EM structure of hACE2-bound SARS-CoV-2 Omicron spike protein with L371S, P373S and F375S mutations (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-06-27
Release date:2022-08-31
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape.
Nat Commun, 13, 2022
7Y9S
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BU of 7y9s by Molmil
Cryo-EM structure of apo SARS-CoV-2 Omicron spike protein (S-2P-GSAS)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhao, Z.N, Xie, Y.F, Qi, J.X, Gao, G.F.
Deposit date:2022-06-26
Release date:2022-08-31
Last modified:2022-09-07
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape.
Nat Commun, 13, 2022
2I89
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BU of 2i89 by Molmil
Structure of septuple mutant of Rat Outer Mitochondrial Membrane Cytochrome B5
Descriptor: Cytochrome b5 type B, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE
Authors:Terzyan, S, Zhang, X.C, Benson, D.R, Wang, L, Sun, N.
Deposit date:2006-09-01
Release date:2006-10-31
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A histidine/tryptophan pi-stacking interaction stabilizes the heme-independent folding core of microsomal apocytochrome b5 relative to that of mitochondrial apocytochrome b5.
Biochemistry, 45, 2006
6CWA
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BU of 6cwa by Molmil
CRYSTAL STRUCTURE PHGDH IN COMPLEX WITH NADH AND 3-PHOSPHOGLYCERATE AT 1.77 A RESOLUTION
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-PHOSPHOGLYCERIC ACID, D-3-phosphoglycerate dehydrogenase
Authors:Davies, D.R, Edwards, T.E.
Deposit date:2018-03-30
Release date:2019-08-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Intracellular Trapping of the Selective Phosphoglycerate Dehydrogenase (PHGDH) InhibitorBI-4924Disrupts Serine Biosynthesis.
J.Med.Chem., 62, 2019
4JYU
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BU of 4jyu by Molmil
Structure of factor VIIA in complex with the inhibitor (2R)-2-[(1-AMINOISOQUINOLIN-6-YL)AMINO]-2-[3-ETHOXY-4-(PROPAN-2-YLOXY)PHENYL]-N-(PHENYLSULFONYL)ETHANAMIDE
Descriptor: (2R)-2-[(1-aminoisoquinolin-6-yl)amino]-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-N-(phenylsulfonyl)ethanamide, CALCIUM ION, Factor VII heavy chain, ...
Authors:Wei, A, Anumula, R.
Deposit date:2013-04-01
Release date:2013-07-24
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Nonbenzamidine acylsulfonamide tissue factor-factor VIIa inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4JYV
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BU of 4jyv by Molmil
Structure of factor VIIA in complex with the inhibitor (2R)-2-[3-ETHOXY-4-(PROPAN-2-YLOXY)PHENYL]-2-(ISOQUINOLIN-6-YLAMINO)-N-[(3-SULFAMOYLPHENYL)SULFONYL]ETHANAMIDE
Descriptor: (2R)-2-[3-ethoxy-4-(propan-2-yloxy)phenyl]-2-(isoquinolin-6-ylamino)-N-[(3-sulfamoylphenyl)sulfonyl]ethanamide, CALCIUM ION, Factor VII heavy chain, ...
Authors:Wei, A, Anumula, R.
Deposit date:2013-04-01
Release date:2013-07-24
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Nonbenzamidine acylsulfonamide tissue factor-factor VIIa inhibitors.
Bioorg.Med.Chem.Lett., 23, 2013
4KBS
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BU of 4kbs by Molmil
Crystal structure of human ceramide-1-phosphate transfer protein (CPTP) in complex with 12:0 phosphatidic acid (12:0 PA)
Descriptor: 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-ETHANEDIOL, Glycolipid transfer protein domain-containing protein 1
Authors:Simanshu, D.K, Brown, R.E, Patel, D.J.
Deposit date:2013-04-23
Release date:2013-07-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.898 Å)
Cite:Non-vesicular trafficking by a ceramide-1-phosphate transfer protein regulates eicosanoids.
Nature, 500, 2013
8HPU
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BU of 8hpu by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.4 RBD in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-13
Release date:2023-12-20
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
2N2N
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BU of 2n2n by Molmil
Tom1 negatively modulates binding of Tollip to phosphatidylinositol 3-phosphate via a coupled folding and binding mechanism
Descriptor: Target of Myb protein 1
Authors:Xiao, S, Armstrong, G, Capelluto, D.
Deposit date:2015-05-11
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding Mechanism.
Structure, 23, 2015
8HQ7
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BU of 8hq7 by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Prototype RBD in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-13
Release date:2023-12-20
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
8HPF
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BU of 8hpf by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron BA.2 RBD in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-12
Release date:2023-12-20
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
8HPV
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BU of 8hpv by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron Prototype S-trimer in complex with fab L4.65 and L5.34
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S2', fab L4.65, ...
Authors:Gao, G.F, Liu, S.
Deposit date:2022-12-13
Release date:2024-01-31
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.65 Å)
Cite:Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine.
Cell Discov, 9, 2023
7CGP
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BU of 7cgp by Molmil
Cryo-EM structure of the human mitochondrial translocase TIM22 complex at 3.7 angstrom.
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acylglycerol kinase, mitochondrial, ...
Authors:Qi, L, Wang, Q, Guan, Z, Yan, C, Yin, P.
Deposit date:2020-07-01
Release date:2020-10-14
Last modified:2021-03-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the human mitochondrial translocase TIM22 complex.
Cell Res., 31, 2021
7CKA
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BU of 7cka by Molmil
The structure of Glycine max (Soybean) Heme oxygenase 1
Descriptor: CITRIC ACID, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Tohda, R, Tanaka, H, Kurisu, G.
Deposit date:2020-07-16
Release date:2020-12-30
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Crystal structure of higher plant heme oxygenase-1 and its mechanism of interaction with ferredoxin.
J.Biol.Chem., 296, 2020
6IF4
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BU of 6if4 by Molmil
Crystal structure of Tbtudor
Descriptor: Histone acetyltransferase
Authors:Gao, J, Ye, K, Diwu, Y, Liao, S, Tu, X.
Deposit date:2018-09-18
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.934 Å)
Cite:Crystal structure of TbEsa1 presumed Tudor domain from Trypanosoma brucei.
J.Struct.Biol., 209, 2020
2N31
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BU of 2n31 by Molmil
Tom1 negatively modulates binding of Tollip to phosphatidylinositol 3-phosphate via a coupled folding and binding mechanism
Descriptor: Toll interacting protein variant
Authors:Xiao, S, Armstrong, G, Capelluto, D.
Deposit date:2015-05-19
Release date:2015-09-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Tom1 Modulates Binding of Tollip to Phosphatidylinositol 3-Phosphate via a Coupled Folding and Binding Mechanism.
Structure, 23, 2015
3RKD
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BU of 3rkd by Molmil
Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody
Descriptor: Capsid protein, Monoclonal Antibody, Heavy Chain, ...
Authors:Tang, X.H, Sivaraman, J.
Deposit date:2011-04-18
Release date:2011-06-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the neutralization and genotype specificity of hepatitis E virus
Proc.Natl.Acad.Sci.USA, 108, 2011
3K1Q
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BU of 3k1q by Molmil
Backbone model of an aquareovirus virion by cryo-electron microscopy and bioinformatics
Descriptor: Core protein VP6, Outer capsid VP5, Outer capsid VP7, ...
Authors:Cheng, L.P, Zhu, J, Hiu, W.H, Zhang, X.K, Honig, B, Fang, Q, Zhou, Z.H.
Deposit date:2009-09-28
Release date:2010-03-23
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Backbone Model of an Aquareovirus Virion by Cryo-Electron Microscopy and Bioinformatics
J.Mol.Biol., 397, 2010
7XCK
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BU of 7xck by Molmil
Cryo-EM structure of SARS-CoV-2 Omicron RBD in complex with S309 fab (local refinement)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, S309 heavy chain, S309 light chain, ...
Authors:Gao, G.F, Qi, J.X, Zhao, Z.N, Xie, Y.F, Liu, S.
Deposit date:2022-03-24
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Omicron SARS-CoV-2 mutations stabilize spike up-RBD conformation and lead to a non-RBM-binding monoclonal antibody escape
Nat Commun, 13, 2022

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